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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20969
         (700 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7)             32   0.39 
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)                32   0.51 
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)                30   1.6  
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)                 30   2.1  
SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09)            29   3.6  
SB_49487| Best HMM Match : Zip (HMM E-Value=0.014)                     28   6.3  
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)                  28   6.3  
SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.4  
SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.4  

>SB_35532| Best HMM Match : Peptidase_S49 (HMM E-Value=2.7)
          Length = 149

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = +1

Query: 49  RTSIPDKVPEAEDKPLNVVENLSSEQELIDQ-ANTIKDIDNSLRANKKEVVDIPVKVIVE 225
           + SIP   P+ + K LN VEN++  +E  ++ A+ + D+ N + + K E     V   V+
Sbjct: 72  KDSIPLAKPQKQQKVLNAVENINWPEEKKERFADVLNDVHN-ISSEKSEEEGDGVVFFVK 130

Query: 226 EIKPSLKSDLKTLK 267
            +K + +++L+ LK
Sbjct: 131 SLKWA-RNELRILK 143


>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1040

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 23/84 (27%), Positives = 45/84 (53%)
 Frame = +1

Query: 34  RARRTRTSIPDKVPEAEDKPLNVVENLSSEQELIDQANTIKDIDNSLRANKKEVVDIPVK 213
           R R+ +    +KV E+ D  +  +EN     EL +Q   IK+ +  L+  +KE+  +  K
Sbjct: 593 RDRQIQNLSLEKVNESRDDEITELEN-----ELEEQREIIKENEEKLKEKEKEIEKLKKK 647

Query: 214 VIVEEIKPSLKSDLKTLKCRMKMR 285
           +I  E+   LK D++T + +++ +
Sbjct: 648 II--ELSDKLK-DMETSRNKVETK 668


>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 652

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +3

Query: 318 PGPPQHQEHETQNPEHHEDAEKIVSSVKN---DINTAEIALRQGFQEVSDGIGKWYARTE 488
           P PP H + E     H E  E+I S  K+   D+  A+  L++  +++ + +G  Y R  
Sbjct: 282 PNPPPHLDEEKIKQLHEELKEEIKSMAKDSEKDLEDAKKDLKEEIEQIKEEVG--YLRYM 339

Query: 489 QINEL 503
           +  +L
Sbjct: 340 EAKQL 344


>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
          Length = 458

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +1

Query: 37  ARRTRTSIPDKVPEAEDKPLNVVENL--SSEQELIDQANTIKDIDNSLRANKKEVVDIPV 210
           A R+R    D   +A    L + E    SS ++LID    I+D ++S    +KE + +  
Sbjct: 124 AMRSRGDTTDAEIKALKTQLKMAEETRDSSRRDLIDAHRKIRDAEDSKETLRKENLHVKR 183

Query: 211 KV-IVEEIKPSLKSDLKTLKCRMKM 282
           +V  +E  K SL+  +  L+ ++K+
Sbjct: 184 QVKDLEMEKQSLEKSVSDLREKVKL 208


>SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09)
          Length = 416

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
 Frame = +1

Query: 145 NTIKDIDNS--LRANKKEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*EI 318
           N +K + +S  +++ K  + D+PV   +EE       D   ++   K    RGL ++  +
Sbjct: 315 NFMKQMKHSQEVKSRKDTLCDLPVSSSMEEKIAKSGMDFNKMRSVYKEGGERGLLTVLAL 374

Query: 319 PGPRS---IKSTKHRILNTTKMLKK 384
           P   S   +K +K R+  T +++ K
Sbjct: 375 PPQYSQLNVKGSKPRVTKTIRIINK 399


>SB_49487| Best HMM Match : Zip (HMM E-Value=0.014)
          Length = 510

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 333 HQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGI 464
           HQ H   +  HH D +KI S          + +  GF  +SDG+
Sbjct: 73  HQNHHDHHHHHHHD-KKIDSKTSIATVAWMVIVSDGFHNLSDGL 115


>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
          Length = 933

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
 Frame = +1

Query: 100 VVENLSSEQELIDQANTIKDIDNSLRANKKEVVD---------IPVKVIVEEIKPSLKSD 252
           V E + S++E+ D  N +KD+ +S+   KK+  D           ++  V+E+K +L   
Sbjct: 302 VKEAMPSKKEIPDMRNNLKDLKSSINEVKKQTDDSQNSHASQLSALEKTVDEMKKALNQQ 361

Query: 253 LKTLKCR 273
           LK +  R
Sbjct: 362 LKDVSNR 368


>SB_2637| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 229

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 540 APKFSWKCCKLPGAR*FARYERTIFQYRLTLPGSLDE 430
           AP+  WKC KL G     R ++  F++   L   LDE
Sbjct: 74  APEQFWKCFKLWGQPVNVREQQDAFEFFCNLTDQLDE 110


>SB_2588| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1068

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 540 APKFSWKCCKLPGAR*FARYERTIFQYRLTLPGSLDE 430
           AP+  WKC KL G     R ++  F++   L   LDE
Sbjct: 66  APEQFWKCFKLWGQPVNVREQQDAFEFFCNLTDQLDE 102


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,889,830
Number of Sequences: 59808
Number of extensions: 336923
Number of successful extensions: 1257
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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