Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20969
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens ... 32 2.3
BC146821-1|AAI46822.1| 1176|Homo sapiens Unknown (protein for IM... 30 6.9
AK126804-1|BAC86701.1| 969|Homo sapiens protein ( Homo sapiens ... 30 6.9
AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein. 30 6.9
AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein. 30 6.9
AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein. 30 6.9
AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein. 30 6.9
BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein pr... 30 9.1
BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein pr... 30 9.1
>AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ42547 fis, clone BRACE3004880. ).
Length = 256
Score = 31.9 bits (69), Expect = 2.3
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Frame = -3
Query: 233 LISSTITLTGMSTTSFLFARRLLSMSLIVLAWS---MSSCSLDKFSTTFKGLSSASGTLS 63
L S T++ G+S+T+ LFA RL S+++ + S +S+C L + + + GLSS + +
Sbjct: 118 LSSMTLSACGLSSTT-LFACRLSSVTVSTCSLSSVTLSACGLSRVTLSACGLSSMTPSAC 176
Query: 62 GM 57
G+
Sbjct: 177 GL 178
>BC146821-1|AAI46822.1| 1176|Homo sapiens Unknown (protein for
IMAGE:8860431) protein.
Length = 1176
Score = 30.3 bits (65), Expect = 6.9
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 139 QANTIKDIDNSLRANK-KEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*E 315
QA+ +D D+ + + K+ D PV V+ E+I SLKS + K + L S E
Sbjct: 554 QASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPETPKKKSDPEL-SKSE 612
Query: 316 IPGPRS----IKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLV 483
+ S K ++R++ T K L +K+ TQ + L SR + T+V
Sbjct: 613 MKQSESRLAESKPNENRLVETKSSENK--LETKVE-TQTEELKQNESRTTECKQNESTIV 669
Query: 484 PSKLTSSRQLATFPRKFRRSNTKVE 558
K +R T P +++N + E
Sbjct: 670 EPKQNENRLSDTKPNDNKQNNGRSE 694
>AK126804-1|BAC86701.1| 969|Homo sapiens protein ( Homo sapiens
cDNA FLJ44854 fis, clone BRACE3052410, highly similar
to Homo sapiens IDN3 protein (IDN3). ).
Length = 969
Score = 30.3 bits (65), Expect = 6.9
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 139 QANTIKDIDNSLRANK-KEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*E 315
QA+ +D D+ + + K+ D PV V+ E+I SLKS + K + L S E
Sbjct: 422 QASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPETPKKKSDPEL-SKSE 480
Query: 316 IPGPRS----IKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLV 483
+ S K ++R++ T K L +K+ TQ + L SR + T+V
Sbjct: 481 MKQSESRLAESKPNENRLVETKSSENK--LETKVE-TQTEELKQNESRTTECKQNESTIV 537
Query: 484 PSKLTSSRQLATFPRKFRRSNTKVE 558
K +R T P +++N + E
Sbjct: 538 EPKQNENRLSDTKPNDNKQNNGRSE 562
>AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.
Length = 2697
Score = 30.3 bits (65), Expect = 6.9
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 139 QANTIKDIDNSLRANK-KEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*E 315
QA+ +D D+ + + K+ D PV V+ E+I SLKS + K + L S E
Sbjct: 554 QASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPETPKKKSDPEL-SKSE 612
Query: 316 IPGPRS----IKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLV 483
+ S K ++R++ T K L +K+ TQ + L SR + T+V
Sbjct: 613 MKQSESRLAESKPNENRLVETKSSENK--LETKVE-TQTEELKQNESRTTECKQNESTIV 669
Query: 484 PSKLTSSRQLATFPRKFRRSNTKVE 558
K +R T P +++N + E
Sbjct: 670 EPKQNENRLSDTKPNDNKQNNGRSE 694
>AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.
Length = 2804
Score = 30.3 bits (65), Expect = 6.9
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 139 QANTIKDIDNSLRANK-KEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*E 315
QA+ +D D+ + + K+ D PV V+ E+I SLKS + K + L S E
Sbjct: 554 QASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPETPKKKSDPEL-SKSE 612
Query: 316 IPGPRS----IKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLV 483
+ S K ++R++ T K L +K+ TQ + L SR + T+V
Sbjct: 613 MKQSESRLAESKPNENRLVETKSSENK--LETKVE-TQTEELKQNESRTTECKQNESTIV 669
Query: 484 PSKLTSSRQLATFPRKFRRSNTKVE 558
K +R T P +++N + E
Sbjct: 670 EPKQNENRLSDTKPNDNKQNNGRSE 694
>AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.
Length = 2158
Score = 30.3 bits (65), Expect = 6.9
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 139 QANTIKDIDNSLRANK-KEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*E 315
QA+ +D D+ + + K+ D PV V+ E+I SLKS + K + L S E
Sbjct: 15 QASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPETPKKKSDPEL-SKSE 73
Query: 316 IPGPRS----IKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLV 483
+ S K ++R++ T K L +K+ TQ + L SR + T+V
Sbjct: 74 MKQSESRLAESKPNENRLVETKSSENK--LETKVE-TQTEELKQNESRTTECKQNESTIV 130
Query: 484 PSKLTSSRQLATFPRKFRRSNTKVE 558
K +R T P +++N + E
Sbjct: 131 EPKQNENRLSDTKPNDNKQNNGRSE 155
>AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.
Length = 2265
Score = 30.3 bits (65), Expect = 6.9
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 139 QANTIKDIDNSLRANK-KEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*E 315
QA+ +D D+ + + K+ D PV V+ E+I SLKS + K + L S E
Sbjct: 15 QASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPETPKKKSDPEL-SKSE 73
Query: 316 IPGPRS----IKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLV 483
+ S K ++R++ T K L +K+ TQ + L SR + T+V
Sbjct: 74 MKQSESRLAESKPNENRLVETKSSENK--LETKVE-TQTEELKQNESRTTECKQNESTIV 130
Query: 484 PSKLTSSRQLATFPRKFRRSNTKVE 558
K +R T P +++N + E
Sbjct: 131 EPKQNENRLSDTKPNDNKQNNGRSE 155
>BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein
protein.
Length = 1175
Score = 29.9 bits (64), Expect = 9.1
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 139 QANTIKDIDNSLRANK-KEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*E 315
QA+ +D D+ + + K+ D PV V+ E+I SLKS + K + L S E
Sbjct: 554 QASITQDSDSIKKPEEIKQCSDAPVSVLQEDIVGSLKSTPENHPETPKKKSDPEL-SKSE 612
Query: 316 IPGPRS----IKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLV 483
+ S K ++R++ T K L +K+ TQ + L SR + T+V
Sbjct: 613 MKQSESRLAESKPNENRLVETKSSENK--LETKVE-TQIEELKQNESRTTECKQNESTIV 669
Query: 484 PSKLTSSRQLATFPRKFRRSNTKVE 558
K +R T P +++N + E
Sbjct: 670 EPKQNENRLSDTKPNDNKQNNGRSE 694
>BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein
protein.
Length = 1175
Score = 29.9 bits (64), Expect = 9.1
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +1
Query: 139 QANTIKDIDNSLRANK-KEVVDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*E 315
QA+ +D D+ + + K+ D PV V+ E+I SLKS + K + L S E
Sbjct: 554 QASITQDSDSIKKPEEIKQCSDAPVSVLQEDIVGSLKSTPENHPETPKKKSDPEL-SKSE 612
Query: 316 IPGPRS----IKSTKHRILNTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLV 483
+ S K ++R++ T K L +K+ TQ + L SR + T+V
Sbjct: 613 MKQSESRLAESKPNENRLVETKSSENK--LETKVE-TQIEELKQNESRTTECKQNESTIV 669
Query: 484 PSKLTSSRQLATFPRKFRRSNTKVE 558
K +R T P +++N + E
Sbjct: 670 EPKQNENRLSDTKPNDNKQNNGRSE 694
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,664,726
Number of Sequences: 237096
Number of extensions: 1629130
Number of successful extensions: 4983
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4977
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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