Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20968
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 115 2e-26
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 68 5e-12
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 48 4e-06
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 29 2.6
AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP ... 29 2.6
AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical... 28 6.0
U41012-3|AAA82295.1| 277|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 115 bits (277), Expect = 2e-26
Identities = 60/122 (49%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Frame = +3
Query: 252 GQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSS 431
G V++SS+ DGIY RH LK+G+PQ L +NRLCGSGFQ++VN+AQ I G ++
Sbjct: 56 GNVVASSR-DGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVL 114
Query: 432 GGSREHVASALRGQKREVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGI 605
G E++ S + R++R G+ G + FED LW LSD Y L MG TAEKLGAQ+ +
Sbjct: 115 AGGTENM-SMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKV 173
Query: 606 TR 611
TR
Sbjct: 174 TR 175
Score = 83.0 bits (196), Expect = 2e-16
Identities = 59/141 (41%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Frame = +1
Query: 97 KGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGK--SSLH 270
K +FIVGAKRT FGTFGG + SAT+L +A+ ALK A V VD ++ G +S
Sbjct: 4 KCVFIVGAKRTAFGTFGGKLKGLSATDLGVVASQAALKHANVGADAVDHVIFGNVVASSR 63
Query: 271 HKLTESTRHVTRRS----KLVFLKRSRCSASTDYAALVSNRS*TALRTF*PAHKISVAGG 438
+ S RH+ +S + L +R S + A+V+ L I +AGG
Sbjct: 64 DGIYLS-RHIGLKSGVPQNVGALTVNRLCGS-GFQAVVNAAQAIKL----GESNIVLAGG 117
Query: 439 VENMSQAPFAVRNVRFGTALG 501
ENMS PFAVR++RFGTALG
Sbjct: 118 TENMSMVPFAVRDIRFGTALG 138
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 68.1 bits (159), Expect = 5e-12
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Frame = +3
Query: 207 EGGRSVPGSGRQHGRGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIV 386
E G P S ++ GQV ++ G R AAL AG+ V +N++C SG ++I+
Sbjct: 59 ERGAVKPSSIQEVFLGQVCQANA--GQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAII 116
Query: 387 NSAQDILTGAQDLSSGGSREHVASA-LRGQKREVRHGSGHQLAFEDTLWAGLSDSYCGLP 563
+AQ I TG QD + GG E ++ Q+ E+ +G G Q+ + + GL+D+Y +
Sbjct: 117 LAAQQIQTGHQDFAIGGGMESMSQVPFYVQRGEIPYG-GFQV-IDGIVKDGLTDAYDKVH 174
Query: 564 MGMTAEKLGAQFGITR 611
MG EK + GITR
Sbjct: 175 MGNCGEKTSKEMGITR 190
Score = 50.8 bits (116), Expect = 7e-07
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Frame = +1
Query: 91 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKSSLH 270
S K FIVGA RTP G+F + +A EL ++A AL+ V P+ + + +G+
Sbjct: 20 SNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQVCQA 79
Query: 271 HKLTESTRHVTRRSKL-----VFLKRSRCSASTDYAALVSNRS*TALRTF*PAHKISVAG 435
+ R + L V CS+ L + + T + F ++ G
Sbjct: 80 NAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDF------AIGG 133
Query: 436 GVENMSQAPFAVR 474
G+E+MSQ PF V+
Sbjct: 134 GMESMSQVPFYVQ 146
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 53.2 bits (122), Expect = 1e-07
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Frame = +1
Query: 91 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKSSLH 270
S K +FI+ RTP G + G F N A EL T+A A++ +GV+P +++ V+G L
Sbjct: 2 SDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEE-VIGGCVLP 60
Query: 271 HKLTES-TRHVTRRSKLVFLKRS---RCSASTDYAALVSNRS*TALRTF*PAHKISVAGG 438
L ++ TR ++ + L ++ S+ ALV+ A+ + + G
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVT----AAVEIKAGYYDTILVVG 116
Query: 439 VENMSQAPFAV--RNVRFGTALGTNSPSK 519
ENMSQ PF V + FG T+ SK
Sbjct: 117 TENMSQVPFYVPRGEIPFGGIQMTDGISK 145
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +3
Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASA-LRGQ 473
R +L AG+P + +N++C S +++V +A +I G D E+++
Sbjct: 69 RQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMSQVPFYVP 128
Query: 474 KREVRHGSGHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611
+ E+ G G Q+ + GL D PMG+ AEK +GITR
Sbjct: 129 RGEIPFG-GIQMT-DGISKDGLEDIKEKGPMGLCAEKTVKDYGITR 172
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 48.4 bits (110), Expect = 4e-06
Identities = 35/117 (29%), Positives = 58/117 (49%)
Frame = +3
Query: 252 GQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSS 431
GQV ++ G + R AAL AG+ V +N+ SG ++I+ +AQ I TG QDL+
Sbjct: 154 GQVCHANA--GQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAI 211
Query: 432 GGSREHVASALRGQKREVRHGSGHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFG 602
GG E ++ R + + +Q+ E T+ G+SD + + + E+ G
Sbjct: 212 GGGMESMSQVPFFLARVEQSSNKYQV--EQTVQDGISDFFDKQELCINGERTNGNIG 266
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +1
Query: 91 SVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKSSL- 267
S K FIVGA RTP G+F + +A EL ++A AL+ V P+ + V +
Sbjct: 98 SNKDAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFLGQVC 157
Query: 268 HHKLTESTRHVTRRSKLVFLKRSRCSASTDYAALVSNRS*TALRTF*PAHKISVAGGVEN 447
H +++ + L + + + +++ + A + +++ GG+E+
Sbjct: 158 HANAGQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGGGMES 217
Query: 448 MSQAPFAVRNV 480
MSQ PF + V
Sbjct: 218 MSQVPFFLARV 228
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 41.1 bits (92), Expect = 6e-04
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Frame = +1
Query: 79 IMSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGK 258
+ ++ I +V A RTPF G VF++ A +LQ A +++ + Q+D ++ G
Sbjct: 18 VAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGT 77
Query: 259 SSLHHKLTESTRHVTRRSKLVFLKRSRCSAST-DYAALVSNRS*T---ALRTF*PAHKIS 426
K T ++ R + L+ + A T A + SN + T + A+ I
Sbjct: 78 VIQECK----TSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAI- 132
Query: 427 VAGGVENMSQAPFAV-RNVRFGTALGTNSPSKTPS 528
+AGGVE +S P RN R LG N PS
Sbjct: 133 IAGGVELLSDVPIRYNRNAR-KAMLGMNKAKDVPS 166
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
protein F54D1.5 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +3
Query: 258 VISSSQTDGIYTPR----HAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDL 425
V+ + D +Y R L+ G+ K L INRL +NSA + ++
Sbjct: 500 VLEKAMNDALYWDRVDFVECLLENGVSM-KNFLSINRLENLYNMDDINSAHSVRNWMENF 558
Query: 426 SSGGSREHVASALRGQKREVRHGSGHQLAFEDTLWAGLSDSY 551
S ++ + GQ E G+ QL + + G D Y
Sbjct: 559 DSMDPHTYLTIPMIGQVVEKLMGNAFQLYYTSRSFKGKYDRY 600
>AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1122
Score = 29.1 bits (62), Expect = 2.6
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Frame = +3
Query: 258 VISSSQTDGIYTPR----HAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDL 425
V+ + D +Y R L+ G+ K L INRL +NSA + ++
Sbjct: 216 VLEKAMNDALYWDRVDFVECLLENGVSM-KNFLSINRLENLYNMDDINSAHSVRNWMENF 274
Query: 426 SSGGSREHVASALRGQKREVRHGSGHQLAFEDTLWAGLSDSY 551
S ++ + GQ E G+ QL + + G D Y
Sbjct: 275 DSMDPHTYLTIPMIGQVVEKLMGNAFQLYYTSRSFKGKYDRY 316
>AL161712-14|CAC35895.1| 286|Caenorhabditis elegans Hypothetical
protein Y66D12A.18 protein.
Length = 286
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 411 GAQDLSSGGSREHVASALRGQKREVRHGSGHQLAFEDT 524
GA+ +SSGG R + L K V H + +FE T
Sbjct: 49 GARFVSSGGDRRPTMAVLPTVKEHVAHSVSKEKSFEKT 86
>U41012-3|AAA82295.1| 277|Caenorhabditis elegans Hypothetical
protein C06A6.3 protein.
Length = 277
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -2
Query: 221 TPASFSAPTVAIVCSSVADVLRKTPPKVPNGVLLAPTMKIPLTEADMIQNYTYPVNVELK 42
T FSA A V A + K P G L + TEAD+ ++ + +N +++
Sbjct: 2 TELEFSADNAAPVIPITAICIVADKNKAPRGFLPIIKCQDDQTEADLWRDGFFTINRQVR 61
Query: 41 YI 36
YI
Sbjct: 62 YI 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,314,883
Number of Sequences: 27780
Number of extensions: 312962
Number of successful extensions: 984
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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