BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20968 (612 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 59 2e-09 At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 59 2e-09 At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 57 1e-08 At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 56 2e-08 At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 56 2e-08 At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 56 2e-08 At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 53 1e-07 At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 50 9e-07 At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 50 9e-07 At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 45 5e-05 At1g53050.1 68414.m06007 protein kinase family protein contains ... 31 0.80 At1g63850.1 68414.m07227 PRLI-interacting factor-related similar... 30 1.1 At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 30 1.4 At5g49680.1 68418.m06151 cell expansion protein, putative simila... 28 4.2 At2g31380.1 68415.m03835 zinc finger (B-box type) family protein... 28 4.2 At1g52640.1 68414.m05944 pentatricopeptide (PPR) repeat-containi... 28 5.6 At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 27 7.4 At1g16270.1 68414.m01948 protein kinase family protein contains ... 27 7.4 At4g14970.1 68417.m02301 hypothetical protein 27 9.8 At1g06040.2 68414.m00633 zinc finger (B-box type) family protein... 27 9.8 At1g06040.1 68414.m00632 zinc finger (B-box type) family protein... 27 9.8 >At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 403 Score = 59.3 bits (137), Expect = 2e-09 Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Frame = +3 Query: 252 GQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSS 431 G V+S++ G R AAL AGIP +N++C SG ++++ +AQ I G D+ Sbjct: 63 GNVLSANL--GQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVV 120 Query: 432 GGSREHVASALRGQKREVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGI 605 G E +++ + E R GS GH + L GL D Y MG AE +F I Sbjct: 121 AGGMESMSNTPK-YLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQI 179 Query: 606 TR 611 TR Sbjct: 180 TR 181 Score = 50.0 bits (114), Expect = 1e-06 Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 5/147 (3%) Frame = +1 Query: 85 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKSS 264 S + + + IVG RTP G F G + AT+L ++A ALK A V PA V +V G + Sbjct: 7 SVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFG-NV 65 Query: 265 LHHKLTESTRHVTR-----RSKLVFLKRSRCSASTDYAALVSNRS*TALRTF*PAHKISV 429 L L ++ + ++ ++ AS A +++ +S + + V Sbjct: 66 LSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQL-----GINDVVV 120 Query: 430 AGGVENMSQAPFAVRNVRFGTALGTNS 510 AGG+E+MS P + R G+ G +S Sbjct: 121 AGGMESMSNTPKYLAEARKGSRFGHDS 147 >At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 398 Score = 59.3 bits (137), Expect = 2e-09 Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Frame = +3 Query: 252 GQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSS 431 G V+S++ G R AAL AGIP +N++C SG ++++ +AQ I G D+ Sbjct: 58 GNVLSANL--GQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVV 115 Query: 432 GGSREHVASALRGQKREVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGI 605 G E +++ + E R GS GH + L GL D Y MG AE +F I Sbjct: 116 AGGMESMSNTPK-YLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQI 174 Query: 606 TR 611 TR Sbjct: 175 TR 176 Score = 49.6 bits (113), Expect = 2e-06 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 5/148 (3%) Frame = +1 Query: 82 MSASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKS 261 M+ + IVG RTP G F G + AT+L ++A ALK A V PA V +V G + Sbjct: 1 MNVDESDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFG-N 59 Query: 262 SLHHKLTESTRHVTR-----RSKLVFLKRSRCSASTDYAALVSNRS*TALRTF*PAHKIS 426 L L ++ + ++ ++ AS A +++ +S + + Sbjct: 60 VLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQL-----GINDVV 114 Query: 427 VAGGVENMSQAPFAVRNVRFGTALGTNS 510 VAGG+E+MS P + R G+ G +S Sbjct: 115 VAGGMESMSNTPKYLAEARKGSRFGHDS 142 >At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 406 Score = 56.8 bits (131), Expect = 1e-08 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 2/107 (1%) Frame = +3 Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQK 476 R AAL AGIP IN++C +G +S++ ++Q I G D+ G E +++ + Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPKYLP 137 Query: 477 REVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611 R GS GH + + GL D Y MG+ E Q+ ITR Sbjct: 138 DASRRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITR 184 Score = 44.4 bits (100), Expect = 6e-05 Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 6/145 (4%) Frame = +1 Query: 85 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKSS 264 S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ + G Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVL 68 Query: 265 LHHKLTESTRHVTRRSKLVF-----LKRSRCSASTDYAALVSNRS*TALRTF*PAHKISV 429 + R + + + C+A L S L + I V Sbjct: 69 TANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGL------NDIVV 122 Query: 430 AGGVENMSQAPFAVRNV-RFGTALG 501 AGG+E+MS P + + R G+ LG Sbjct: 123 AGGMESMSNVPKYLPDASRRGSRLG 147 >At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 405 Score = 55.6 bits (128), Expect = 2e-08 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%) Frame = +3 Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQK 476 R AAL AGIP IN++C +G +S++ ++Q I G D+ G E +++ + Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPK-YL 136 Query: 477 REVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611 + R GS GH + + GL D Y MG+ E Q+ ITR Sbjct: 137 PDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITR 183 Score = 48.8 bits (111), Expect = 3e-06 Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 5/144 (3%) Frame = +1 Query: 85 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKSS 264 S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ + G Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVL 68 Query: 265 LHHKLTESTRHVTRRSKLVF-----LKRSRCSASTDYAALVSNRS*TALRTF*PAHKISV 429 + R + + + C+A L S L + I V Sbjct: 69 TANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGL------NDIVV 122 Query: 430 AGGVENMSQAPFAVRNVRFGTALG 501 AGG+E+MS P + + R G+ LG Sbjct: 123 AGGMESMSNVPKYLPDARRGSRLG 146 >At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 415 Score = 55.6 bits (128), Expect = 2e-08 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%) Frame = +3 Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQK 476 R AAL AGIP IN++C +G +S++ ++Q I G D+ G E +++ + Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPK-YL 136 Query: 477 REVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611 + R GS GH + + GL D Y MG+ E Q+ ITR Sbjct: 137 PDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITR 183 Score = 48.8 bits (111), Expect = 3e-06 Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 5/144 (3%) Frame = +1 Query: 85 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKSS 264 S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ + G Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVL 68 Query: 265 LHHKLTESTRHVTRRSKLVF-----LKRSRCSASTDYAALVSNRS*TALRTF*PAHKISV 429 + R + + + C+A L S L + I V Sbjct: 69 TANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGL------NDIVV 122 Query: 430 AGGVENMSQAPFAVRNVRFGTALG 501 AGG+E+MS P + + R G+ LG Sbjct: 123 AGGMESMSNVPKYLPDARRGSRLG 146 >At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 405 Score = 55.6 bits (128), Expect = 2e-08 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%) Frame = +3 Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQK 476 R AAL AGIP IN++C +G +S++ ++Q I G D+ G E +++ + Sbjct: 78 RQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVPK-YL 136 Query: 477 REVRHGS--GHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611 + R GS GH + + GL D Y MG+ E Q+ ITR Sbjct: 137 PDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITR 183 Score = 48.8 bits (111), Expect = 3e-06 Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 5/144 (3%) Frame = +1 Query: 85 SASVKGIFIVGAKRTPFGTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVGKSS 264 S + + +VG RTP G F G + +AT L +IA ALK A V PA V+ + G Sbjct: 9 SLQPRDVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVL 68 Query: 265 LHHKLTESTRHVTRRSKLVF-----LKRSRCSASTDYAALVSNRS*TALRTF*PAHKISV 429 + R + + + C+A L S L + I V Sbjct: 69 TANLGQAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGL------NDIVV 122 Query: 430 AGGVENMSQAPFAVRNVRFGTALG 501 AGG+E+MS P + + R G+ LG Sbjct: 123 AGGMESMSNVPKYLPDARRGSRLG 146 >At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative similar to 3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from [Arabidopsis thaliana] GI:2981616, [Cucumis sativus] GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621; contains InterPro accession IPR002155: Thiolase Length = 443 Score = 53.2 bits (122), Expect = 1e-07 Identities = 34/105 (32%), Positives = 51/105 (48%) Frame = +3 Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQK 476 R AA AG P+ P+ +NR C SG Q++ + A I G D+ G E + + RG K Sbjct: 109 RMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPRGWK 168 Query: 477 REVRHGSGHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611 V + + FE C LPMG+T+E + +F ++R Sbjct: 169 GSV---NPNVKKFEQA-------HNCLLPMGITSENVAHRFNVSR 203 Score = 27.1 bits (57), Expect = 9.8 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 103 IFIVGAKRTPF-GTFGGVFRNTSATELQTIATVGALKEAGVSPAQVDSMVVG 255 + IV A+RT G F++T EL +++ V+P++V +VVG Sbjct: 44 VVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVG 95 >At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-ketoacyl-CoA thiolase 1 (PKT1) identical to 3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana] GI:3169568 Length = 457 Score = 50.4 bits (115), Expect = 9e-07 Identities = 34/105 (32%), Positives = 49/105 (46%) Frame = +3 Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQK 476 R AA AG P PV +NR C SG Q++ + A I G D+ G E +++ Sbjct: 116 RVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMST------ 169 Query: 477 REVRHGSGHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611 + G H + D C LPMG+T+E + +FG+TR Sbjct: 170 DHIPGGGFHGSNPRAQDFPKARD--CLLPMGITSENVAERFGVTR 212 >At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-ketoacyl-CoA thiolase 1 (PKT1) identical to 3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana] GI:3169568 Length = 414 Score = 50.4 bits (115), Expect = 9e-07 Identities = 34/105 (32%), Positives = 49/105 (46%) Frame = +3 Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQK 476 R AA AG P PV +NR C SG Q++ + A I G D+ G E +++ Sbjct: 73 RVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMST------ 126 Query: 477 REVRHGSGHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611 + G H + D C LPMG+T+E + +FG+TR Sbjct: 127 DHIPGGGFHGSNPRAQDFPKARD--CLLPMGITSENVAERFGVTR 169 >At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative similar to 3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from [Arabidopsis thaliana] GI:2981616, [Cucumis sativus] GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621; contains InterPro accession IPR002155: Thiolase Length = 462 Score = 44.8 bits (101), Expect = 5e-05 Identities = 32/105 (30%), Positives = 48/105 (45%) Frame = +3 Query: 297 RHAALKAGIPQEKPVLGINRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQK 476 R AA AG P+ V +NR C SG Q++ + A I G D+ G E + + + Sbjct: 117 RMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWE 176 Query: 477 REVRHGSGHQLAFEDTLWAGLSDSYCGLPMGMTAEKLGAQFGITR 611 V A + A C LPMG+T+E + +FG++R Sbjct: 177 GSVNP------AVKKFAQA----QNCLLPMGVTSENVAQRFGVSR 211 >At1g53050.1 68414.m06007 protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain Length = 694 Score = 30.7 bits (66), Expect = 0.80 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +3 Query: 216 RSVPGSGRQHGRGQVISSSQTDGIYTPRHAALKAGIPQEKPVLGINRLCGS 368 RS GR++ + SS D P AA + G PQ++ G+ RL GS Sbjct: 549 RSASAKGRRNYQDSQKVSSIADYSAMPGFAATRTGAPQQETCRGMTRLPGS 599 >At1g63850.1 68414.m07227 PRLI-interacting factor-related similar to PRLI-interacting factor G (GI:11139264) [Arabidopsis thaliana]; contains Prosite PS00037: Myb DNA-binding domain repeat signature 1 Length = 548 Score = 30.3 bits (65), Expect = 1.1 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -2 Query: 206 SAPTVAIVCSSVADVLRKTPPKVPNGVLLAPTMKIPLTEADMIQNYTYPVN 54 S+PT+ + +S AD + K P ++ NGVL +P+ + A T VN Sbjct: 55 SSPTLFEMMASEADTIGKVPVQIHNGVLPSPSSSSSSSSAAATAARTTNVN 105 >At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) family protein contains Pfam domain, PF00097: Zinc finger, C3HC4 type (RING finger) Length = 396 Score = 29.9 bits (64), Expect = 1.4 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = +3 Query: 417 QDLSSGGSREHVASALRGQKREVRHGSGHQLAF 515 ++ S+G E+V +A RG++ EVR G+G + +F Sbjct: 327 RETSNGNVVENVGNADRGREDEVRSGNGRRFSF 359 >At5g49680.1 68418.m06151 cell expansion protein, putative similar to SABRE [Arabidopsis thaliana] GI:719291 Length = 1378 Score = 28.3 bits (60), Expect = 4.2 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +3 Query: 405 LTGAQDLSSGGSREHV-ASALRGQKREVRHGSGHQLAFEDTL 527 L A DL G + + +S +RG RE+R S ++E+T+ Sbjct: 1057 LLAASDLGQGSKNQSLKSSTIRGSGRELRRTSSFDRSWEETV 1098 >At2g31380.1 68415.m03835 zinc finger (B-box type) family protein / salt tolerance-like protein (STH) contains Pfam profile PF00643: B-box zinc finger; identical to cDNA B-box zinc finger protein STH GI:12698721, SP|Q9SID1 Salt tolerance-like protein (Arabidopsis thaliana) Length = 238 Score = 28.3 bits (60), Expect = 4.2 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -2 Query: 455 CDMFSTPPATEILCAGQNVLSAVHDRLETRAA*SVDAEH-RLLLRNTS 315 CD+ PAT I CA + L A D +E AA + ++H RL L + S Sbjct: 5 CDVCEKAPATLICCADEAALCAKCD-VEVHAANKLASKHQRLFLDSLS 51 >At1g52640.1 68414.m05944 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 523 Score = 27.9 bits (59), Expect = 5.6 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = +3 Query: 351 NRLCGSGFQSIVNSAQDILTGAQDLSSGGSREHVASALRGQKREV 485 NRL G G +V D+L G + SS S + +A +RG++R + Sbjct: 462 NRLVGWGQMDVV----DVLAGKMERSSSCSVQDMAVEMRGKRRRL 502 >At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein contains Pfam domain PF00096: Zinc finger, C2H2 type Length = 367 Score = 27.5 bits (58), Expect = 7.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 604 IPNWAPSFSAVMPMGSPQYESESPA 530 IP+ AP FSA +P+G Q S + A Sbjct: 240 IPSQAPPFSAPLPVGGAQQPSHADA 264 >At1g16270.1 68414.m01948 protein kinase family protein contains PF|00069 Eukaryotic protein kinase domain. ESTs gb|H37741, gb|T43005 and gb|AI100340 come from this gene Length = 1147 Score = 27.5 bits (58), Expect = 7.4 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = +1 Query: 187 IATVGALKEA-GVSPAQVDSMVVGKSSLHHKLTESTRHVTRRSKLV 321 +A G +K+ G + A V +V SL H L RH+ RR +L+ Sbjct: 927 VAFYGVVKDGPGATLATVTEYMVD-GSLRHVLVRKDRHLDRRKRLI 971 >At4g14970.1 68417.m02301 hypothetical protein Length = 1286 Score = 27.1 bits (57), Expect = 9.8 Identities = 10/28 (35%), Positives = 17/28 (60%) Frame = -2 Query: 158 RKTPPKVPNGVLLAPTMKIPLTEADMIQ 75 RK PP P+ AP++KIP + + ++ Sbjct: 6 RKKPPPPPSSSSAAPSLKIPQPQKESVE 33 >At1g06040.2 68414.m00633 zinc finger (B-box type) family protein / salt-tolerance protein (STO) identical to SP|Q96288 Salt-tolerance protein [Arabidopsis thaliana]; contains Pfam profile PF00643: B-box zinc finger Length = 177 Score = 27.1 bits (57), Expect = 9.8 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -2 Query: 455 CDMFSTPPATEILCAGQNVLSAVHDRLETRAA*SVDAEHRLLLRNT 318 CD+ PAT I CA + L D +E AA + ++H+ L N+ Sbjct: 5 CDVCEKAPATVICCADEAALCPQCD-IEIHAANKLASKHQRLHLNS 49 >At1g06040.1 68414.m00632 zinc finger (B-box type) family protein / salt-tolerance protein (STO) identical to SP|Q96288 Salt-tolerance protein [Arabidopsis thaliana]; contains Pfam profile PF00643: B-box zinc finger Length = 248 Score = 27.1 bits (57), Expect = 9.8 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -2 Query: 455 CDMFSTPPATEILCAGQNVLSAVHDRLETRAA*SVDAEHRLLLRNT 318 CD+ PAT I CA + L D +E AA + ++H+ L N+ Sbjct: 5 CDVCEKAPATVICCADEAALCPQCD-IEIHAANKLASKHQRLHLNS 49 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,625,758 Number of Sequences: 28952 Number of extensions: 297729 Number of successful extensions: 941 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 877 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 928 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1226538000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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