BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20967 (726 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 84 1e-16 09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 83 3e-16 08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 83 3e-16 02_03_0340 + 17946133-17946136,17946207-17946342,17946428-179465... 54 1e-07 06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086... 42 7e-04 06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 0.93 07_03_1414 - 26403361-26403969 31 1.2 07_03_1422 + 26462871-26463434,26463772-26463897 29 2.8 07_03_1413 - 26396426-26396890 29 2.8 02_01_0228 + 1507314-1507566,1507645-1507913,1508010-1508213,150... 29 3.8 04_04_1159 - 31352922-31353098,31354117-31354267,31354581-313548... 29 5.0 10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 28 6.6 08_02_0431 + 17053928-17054189,17054296-17054564,17054661-170548... 28 6.6 07_01_0794 - 6179424-6179714,6179797-6179844,6180189-6180248,618... 28 6.6 02_02_0061 + 6468190-6471046,6471318-6471736 28 6.6 01_01_1202 - 9681836-9683146 28 8.7 >01_07_0018 - 40488702-40488833,40488928-40489020,40489125-40489253, 40489379-40489500,40490292-40490544,40490636-40490638 Length = 243 Score = 83.8 bits (198), Expect = 1e-16 Identities = 36/53 (67%), Positives = 43/53 (81%) Frame = -1 Query: 189 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF 31 LFEKRPK F IG + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQF Sbjct: 25 LFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQF 77 >09_04_0677 - 19388888-19389019,19389124-19389216,19389317-19389445, 19389559-19389728,19390280-19390481,19390576-19390623, 19390797-19390799 Length = 258 Score = 82.6 bits (195), Expect = 3e-16 Identities = 34/53 (64%), Positives = 43/53 (81%) Frame = -1 Query: 189 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF 31 LFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQF Sbjct: 24 LFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQF 76 >08_02_0211 - 14333553-14333684,14333795-14333887,14334019-14334105, 14334220-14334389,14334985-14335186,14335604-14335606 Length = 228 Score = 82.6 bits (195), Expect = 3e-16 Identities = 34/53 (64%), Positives = 43/53 (81%) Frame = -1 Query: 189 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF 31 LFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQF Sbjct: 8 LFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQF 60 >02_03_0340 + 17946133-17946136,17946207-17946342,17946428-17946584, 17947330-17947458 Length = 141 Score = 54.0 bits (124), Expect = 1e-07 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 18/82 (21%) Frame = +3 Query: 516 VYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKH------------------EAK 641 V QK + LR YK K PLDLR KKTRA+R+ LTKH + Sbjct: 60 VISQKQRAALREAYKKKSLLPLDLRPKKTRAIRRRLTKHQLCYTCIRLLTFSMVAISQLS 119 Query: 642 IKTRKEIRKKSLFPPRVYAVKA 707 +KT +E +++ FP R YA+KA Sbjct: 120 LKTEREKKREKYFPMRKYAIKA 141 Score = 53.2 bits (122), Expect = 2e-07 Identities = 30/77 (38%), Positives = 44/77 (57%) Frame = +1 Query: 340 IGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVTLC 519 + ++K ELR K+ + LRVAKVTGG +KLSKI+VVR +IARV Sbjct: 1 MARIKVDELRGKNKAELQAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 60 Query: 520 ITRR*RSILETTTKTRN 570 I+++ R+ L K ++ Sbjct: 61 ISQKQRAALREAYKKKS 77 >06_03_1515 - 30707600-30707613,30708093-30708167,30708596-30708647, 30708751-30708831,30709145-30709219,30709870-30709977, 30710026-30710032,30710133-30710268,30710361-30710685 Length = 290 Score = 41.5 bits (93), Expect = 7e-04 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%) Frame = +3 Query: 528 KMKVNLRNHYKNKKYK--PLDLRAKKTRAMRKALTKHEAKI 644 K++ LR YK KK PLDLR KKT A+R+ LTKH+ + Sbjct: 155 KVRTALREAYKKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195 Score = 29.9 bits (64), Expect = 2.2 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = +1 Query: 340 IGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRV 486 + ++K LR ++ + LRVA+VTGG +KLS I+V Sbjct: 108 MARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIKV 156 >06_03_0392 + 20318728-20319309,20319596-20319725,20319844-20319895, 20319995-20320061,20320547-20320633,20322526-20322567, 20322635-20322740,20323155-20323219,20323299-20323343, 20323442-20323549,20323636-20323723,20324147-20324193, 20324355-20324363 Length = 475 Score = 31.1 bits (67), Expect = 0.93 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -3 Query: 97 PHPAPEGCTSASSESAPSDQP 35 P PAPE +A+ E+APSD P Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73 >07_03_1414 - 26403361-26403969 Length = 202 Score = 30.7 bits (66), Expect = 1.2 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = +1 Query: 85 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 225 AL A + P + G++ + + +T G+ L P LEE + GL L+D Sbjct: 76 ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122 >07_03_1422 + 26462871-26463434,26463772-26463897 Length = 229 Score = 29.5 bits (63), Expect = 2.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 85 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 225 AL + P Y G+V + + +T G+ L P LEE GL L D Sbjct: 74 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120 >07_03_1413 - 26396426-26396890 Length = 154 Score = 29.5 bits (63), Expect = 2.8 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 85 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 225 AL + P Y G+V + + +T G+ L P LEE GL L D Sbjct: 28 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74 >02_01_0228 + 1507314-1507566,1507645-1507913,1508010-1508213, 1508323-1508415,1508509-1508604,1508688-1509032, 1509123-1509191,1509284-1509367,1509455-1509520, 1509735-1509800,1509934-1509999,1510097-1510162, 1510280-1510327,1510406-1510468,1510554-1510619, 1510782-1510841,1511185-1511232,1511315-1511605 Length = 750 Score = 29.1 bits (62), Expect = 3.8 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = +3 Query: 537 VNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAK--IKTRKEIRKKSLFPPRVYAVKA 707 + L NH+ N+K K + + KK +KA+ K +TR+E+R+K P + Y +A Sbjct: 230 IALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQKD--PAKKYPHRA 286 >04_04_1159 - 31352922-31353098,31354117-31354267,31354581-31354812, 31354902-31355112,31355791-31355909,31355994-31356176, 31356283-31356481,31356636-31357015,31357127-31357191, 31357925-31357990,31358427-31358501,31358781-31358852, 31359318-31359386,31359476-31359547,31359658-31359729, 31360126-31360230,31360282-31360353,31361053-31361230, 31361707-31361791 Length = 860 Score = 28.7 bits (61), Expect = 5.0 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 76 SLLALDADILGPSYKSGQVPSWLNALTNGKVLWPL---LEERIHDLLG-LNLFDHQWGGG 243 SL L+ + + SG++PS L+ LT K+LW +I D +G NL D ++ G Sbjct: 164 SLFKLEELFIDSAGLSGELPSSLSKLTRMKILWASDNNFTGQIPDYIGSWNLTDLRFQGN 223 Query: 244 YF 249 F Sbjct: 224 SF 225 >10_08_0936 - 21679002-21679800,21679893-21680116,21681174-21681361, 21681505-21682597 Length = 767 Score = 28.3 bits (60), Expect = 6.6 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -3 Query: 97 PHPAPEGCTSASSESAPSDQPILPRH 20 P P P +S +S S P P+LP+H Sbjct: 82 PTPTPPPPSSTASSSLPPPTPLLPKH 107 >08_02_0431 + 17053928-17054189,17054296-17054564,17054661-17054864, 17054974-17055066,17055160-17055255,17055339-17055683, 17055935-17056018,17056106-17056171,17056268-17056333, 17056436-17056501,17056635-17056700,17056798-17056863, 17056981-17057028,17057107-17057169,17057255-17057320, 17057483-17057542,17057888-17057935,17058019-17058255, 17058346-17058366 Length = 741 Score = 28.3 bits (60), Expect = 6.6 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +3 Query: 537 VNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAK--IKTRKEIRKK 671 + L NH+ N+K K + + KK +KA+ K +TR+E+R+K Sbjct: 233 IALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQK 279 >07_01_0794 - 6179424-6179714,6179797-6179844,6180189-6180248, 6180411-6180476,6180562-6180624,6180703-6180750, 6180868-6180933,6181031-6181096,6181230-6181295, 6181510-6181575,6181663-6181746,6181839-6181907, 6181998-6182342,6182426-6182521,6182615-6182707, 6182817-6183020,6183117-6183385,6183492-6183753 Length = 753 Score = 28.3 bits (60), Expect = 6.6 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +3 Query: 537 VNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAK--IKTRKEIRKK 671 + L NH+ N+K K + + KK +KA+ K +TR+E+R+K Sbjct: 233 IALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQK 279 >02_02_0061 + 6468190-6471046,6471318-6471736 Length = 1091 Score = 28.3 bits (60), Expect = 6.6 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = +1 Query: 13 LSSVWVKLVDRRGHFQTTLKYSLLALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEE 189 + ++W+ +G + SL L A +LG + +G +PS++ +L N K L +LEE Sbjct: 91 MENIWLYSNKLQGQIPSEFG-SLQNLQALVLGENRLTGSIPSFIGSLANLKFL--ILEE 146 >01_01_1202 - 9681836-9683146 Length = 436 Score = 27.9 bits (59), Expect = 8.7 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = -3 Query: 199 RESSLREEAKELCHWSGHSANSGLVQICKMAQVYPHPAPEGCTSASSESAPSDQP 35 RE +L EA SGHS+N G + Q+ H E S+ SA + P Sbjct: 272 RERNLEREAPMAVSVSGHSSNQGGSSQHAVIQIEQHEEGETVPLVSAASANNAAP 326 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,217,984 Number of Sequences: 37544 Number of extensions: 322609 Number of successful extensions: 1166 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1166 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1898162308 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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