Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20967
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   105   5e-23
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   105   5e-23
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   105   5e-23
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   105   5e-23
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   105   5e-23
AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...    97   2e-20
AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...    97   2e-20
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...    97   2e-20
BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p pro...    31   2.1  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  105 bits (253), Expect = 5e-23
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -1

Query: 189 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF 31
           LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQF 88


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  105 bits (253), Expect = 5e-23
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -1

Query: 189 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF 31
           LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQF 88


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  105 bits (253), Expect = 5e-23
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -1

Query: 189 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF 31
           LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQF 88


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  105 bits (253), Expect = 5e-23
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -1

Query: 189 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF 31
           LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQF 88


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  105 bits (253), Expect = 5e-23
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -1

Query: 189 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQF 31
           LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQF 88


>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 47/73 (64%), Positives = 56/73 (76%)
 Frame = +3

Query: 489 KKSYRTCYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 668
           +K+    YIV HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 51  RKAIARVYIVMHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110

Query: 669 KSLFPPRVYAVKA 707
           +S+FP R +AVKA
Sbjct: 111 RSVFPQRKFAVKA 123



 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 37/74 (50%), Positives = 44/74 (59%)
 Frame = +1

Query: 346 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVTLCIT 525
           KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARV + + 
Sbjct: 3   KVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIVMH 62

Query: 526 RR*RSILETTTKTR 567
           ++ +  L    K +
Sbjct: 63  QKQKENLRKVFKNK 76


>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 47/73 (64%), Positives = 56/73 (76%)
 Frame = +3

Query: 489 KKSYRTCYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 668
           +K+    YIV HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 51  RKAIARVYIVMHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110

Query: 669 KSLFPPRVYAVKA 707
           +S+FP R +AVKA
Sbjct: 111 RSVFPQRKFAVKA 123



 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 37/74 (50%), Positives = 44/74 (59%)
 Frame = +1

Query: 346 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVTLCIT 525
           KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARV + + 
Sbjct: 3   KVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMH 62

Query: 526 RR*RSILETTTKTR 567
           ++ +  L    K +
Sbjct: 63  QKQKENLRKVFKNK 76


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 47/73 (64%), Positives = 56/73 (76%)
 Frame = +3

Query: 489 KKSYRTCYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 668
           +K+    YIV HQK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK
Sbjct: 51  RKAIARVYIVMHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRK 110

Query: 669 KSLFPPRVYAVKA 707
           +S+FP R +AVKA
Sbjct: 111 RSVFPQRKFAVKA 123



 Score = 65.3 bits (152), Expect = 8e-11
 Identities = 37/74 (50%), Positives = 44/74 (59%)
 Frame = +1

Query: 346 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVTLCIT 525
           KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARV + + 
Sbjct: 3   KVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMH 62

Query: 526 RR*RSILETTTKTR 567
           ++ +  L    K +
Sbjct: 63  QKQKENLRKVFKNK 76


>BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p
           protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 713 YSSFNGIDSRWEERFLSDLFPRLDLCFV 630
           Y++F   + +W +  + D+F RL LCFV
Sbjct: 46  YTTFFDDNIQWSQMVIKDIFQRLQLCFV 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,351,443
Number of Sequences: 53049
Number of extensions: 527335
Number of successful extensions: 1992
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)