Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20966
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    27   0.11 
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    27   0.11 
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    27   0.11 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.4  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 155 RSSALIKRTTSLQ*INCAETALRNEQALQITE-DEEFEY 268
           RSS L   T+S+  +NC  T   N    Q+TE ++EF +
Sbjct: 236 RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 274


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 155 RSSALIKRTTSLQ*INCAETALRNEQALQITE-DEEFEY 268
           RSS L   T+S+  +NC  T   N    Q+TE ++EF +
Sbjct: 25  RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 63


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 155 RSSALIKRTTSLQ*INCAETALRNEQALQITE-DEEFEY 268
           RSS L   T+S+  +NC  T   N    Q+TE ++EF +
Sbjct: 25  RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 63


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 541 TIINNYPTII-GVSWWATSAKVIV 473
           TI+NNY TI+ G +W + S   +V
Sbjct: 184 TILNNYLTIVLGETWTSLSVYHLV 207


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -3

Query: 541 TIINNYPTII-GVSWWATSAKVIV 473
           TI+NNY TI+ G +W + S   +V
Sbjct: 180 TILNNYLTIVLGETWTSLSVYHLV 203


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 648 ECPELLKAVLASRPAYSN 595
           ECP++ + V A+ P Y++
Sbjct: 171 ECPKVNETVAATHPRYAD 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,563
Number of Sequences: 336
Number of extensions: 3320
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)