BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20966 (687 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 27 0.11 AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 27 0.11 AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 27 0.11 AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 23 2.3 AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 23 2.3 EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 22 5.4 >AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain transcription factor Labialprotein. Length = 353 Score = 27.5 bits (58), Expect = 0.11 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 155 RSSALIKRTTSLQ*INCAETALRNEQALQITE-DEEFEY 268 RSS L T+S+ +NC T N Q+TE ++EF + Sbjct: 236 RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 274 >AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein protein. Length = 142 Score = 27.5 bits (58), Expect = 0.11 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 155 RSSALIKRTTSLQ*INCAETALRNEQALQITE-DEEFEY 268 RSS L T+S+ +NC T N Q+TE ++EF + Sbjct: 25 RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 63 >AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein protein. Length = 142 Score = 27.5 bits (58), Expect = 0.11 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 155 RSSALIKRTTSLQ*INCAETALRNEQALQITE-DEEFEY 268 RSS L T+S+ +NC T N Q+TE ++EF + Sbjct: 25 RSSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 63 >AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor candidate 44 protein. Length = 313 Score = 23.0 bits (47), Expect = 2.3 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -3 Query: 541 TIINNYPTII-GVSWWATSAKVIV 473 TI+NNY TI+ G +W + S +V Sbjct: 184 TILNNYLTIVLGETWTSLSVYHLV 207 >AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor candidate 4 protein. Length = 309 Score = 23.0 bits (47), Expect = 2.3 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%) Frame = -3 Query: 541 TIINNYPTII-GVSWWATSAKVIV 473 TI+NNY TI+ G +W + S +V Sbjct: 180 TILNNYLTIVLGETWTSLSVYHLV 203 >EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B protein. Length = 279 Score = 21.8 bits (44), Expect = 5.4 Identities = 7/18 (38%), Positives = 13/18 (72%) Frame = -1 Query: 648 ECPELLKAVLASRPAYSN 595 ECP++ + V A+ P Y++ Sbjct: 171 ECPKVNETVAATHPRYAD 188 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 159,563 Number of Sequences: 336 Number of extensions: 3320 Number of successful extensions: 7 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 18010165 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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