BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20966 (687 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0065 + 461182-461271,462222-462288,462408-462664 68 6e-12 12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529 67 1e-11 01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592 64 8e-11 02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478 64 1e-10 08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 51 1e-06 08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295... 51 1e-06 09_02_0530 + 10285844-10287217 50 2e-06 02_05_0889 - 32532495-32533832,32533919-32534151,32534321-325344... 48 9e-06 07_01_0887 + 7380332-7380370,7381286-7381640,7382752-7382886,738... 44 1e-04 03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,117... 31 0.65 09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 31 0.86 01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 31 1.1 02_04_0395 + 22590097-22590343,22590566-22590921 30 2.0 08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 29 2.6 >05_01_0065 + 461182-461271,462222-462288,462408-462664 Length = 137 Score = 68.1 bits (159), Expect = 6e-12 Identities = 26/58 (44%), Positives = 39/58 (67%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 DDCW++I +VY++S FL++HPGG D++L G+DA+ F GHS A +D + V Sbjct: 21 DDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYV 78 >12_01_0743 + 6676906-6677007,6677160-6677226,6678246-6678529 Length = 150 Score = 66.9 bits (156), Expect = 1e-11 Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%) Frame = +2 Query: 515 DCWIVIYDRVYDISTFLDEHPGGGDIMLE-YAGRDASTAFRSSGHSRMAVKALDRFLV 685 DCW+VI+ +VYD++ FL++HPGG D++L A DA+ AF GHS A+ ++ +L+ Sbjct: 26 DCWVVIHGKVYDVTKFLEDHPGGEDVLLHASASGDATEAFEDVGHSTSAISMMNNYLI 83 >01_07_0340 + 42851330-42851413,42852179-42852245,42852336-42852592 Length = 135 Score = 64.5 bits (150), Expect = 8e-11 Identities = 24/58 (41%), Positives = 38/58 (65%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 DDCW++I +VY+++ FL++HPGG D++L +DA+ F GHS A +D + V Sbjct: 19 DDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHSTTARAMMDEYYV 76 >02_05_0137 - 26181793-26182055,26182172-26182238,26182392-26182478 Length = 138 Score = 64.1 bits (149), Expect = 1e-10 Identities = 22/57 (38%), Positives = 39/57 (68%) Frame = +2 Query: 515 DCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 DCW++I +VYD+S F++EHPGG +++L G+DA+ F GH+ A + + ++ + Sbjct: 21 DCWLIIAGKVYDVSPFMEEHPGGDEVLLACTGKDATADFNDIGHTATAKELMPQYCI 77 >08_02_0958 - 23044708-23046045,23046131-23046363,23047059-23047199, 23047296-23048334 Length = 916 Score = 50.8 bits (116), Expect = 1e-06 Identities = 24/58 (41%), Positives = 33/58 (56%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 D WIV++ VYD + FL +HPGG D +L AG D + F + HS A LD + + Sbjct: 556 DSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEF-DAIHSDKAKALLDTYRI 612 >08_02_0956 + 23026108-23027146,23027255-23027395,23029334-23029566, 23029652-23030989 Length = 916 Score = 50.8 bits (116), Expect = 1e-06 Identities = 24/58 (41%), Positives = 33/58 (56%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 D WIV++ VYD + FL +HPGG D +L AG D + F + HS A LD + + Sbjct: 556 DSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEF-DAIHSDKAKALLDTYRI 612 >09_02_0530 + 10285844-10287217 Length = 457 Score = 49.6 bits (113), Expect = 2e-06 Identities = 26/58 (44%), Positives = 35/58 (60%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 DD WI I VYD++ ++ HPGG +L AG+DA+ AF ++ H A L RFLV Sbjct: 31 DDLWISISGDVYDVTAWVPHHPGGDIPLLTLAGQDATDAF-AAYHPPSARPLLGRFLV 87 >02_05_0889 - 32532495-32533832,32533919-32534151,32534321-32534461, 32534564-32535521 Length = 889 Score = 47.6 bits (108), Expect = 9e-06 Identities = 21/59 (35%), Positives = 34/59 (57%) Frame = +2 Query: 509 PDDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 P+ WI+++ VYD + FL +HPGG D ++ AG D + F + HS A L+ + + Sbjct: 527 PESAWIIVHGHVYDCTGFLKDHPGGADSIMINAGTDCTEEF-DAIHSDKARGLLEMYRI 584 >07_01_0887 + 7380332-7380370,7381286-7381640,7382752-7382886, 7383029-7383138 Length = 212 Score = 44.0 bits (99), Expect = 1e-04 Identities = 16/40 (40%), Positives = 28/40 (70%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAF 631 D W V+ RVY+I+ ++ HPGG D++++ AG+D++ F Sbjct: 154 DSIWTVLKGRVYNIAPYMKFHPGGVDMLMKAAGKDSTALF 193 >03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539, 1178179-1178378,1178505-1178605,1178747-1179369, 1179451-1179546,1179637-1179798,1179889-1180068, 1180173-1180323,1180408-1180641,1180753-1180913, 1181041-1181163,1181261-1181421,1181655-1181877, 1181952-1182346,1182461-1182671,1183536-1184522 Length = 1883 Score = 31.5 bits (68), Expect = 0.65 Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Frame = +3 Query: 276 KLNAKMTTVHTTNEVNLSAPTPNQXXXXXXXXXXXXXXRFVNPWSVNTEQKQWTEVVPGS 455 K A+M T T N++ L P RFV VNT + WT+ G Sbjct: 1791 KNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVNTSDRGWTDECIGE 1850 Query: 456 P-----EAKD-RTITLAEVAHHDTP 512 P +AKD + L E+ + D P Sbjct: 1851 PMPSVKKAKDSAAVLLLELLNRDFP 1875 >09_02_0511 - 10079180-10079355,10079656-10079722,10080144-10080181, 10080255-10080336 Length = 120 Score = 31.1 bits (67), Expect = 0.86 Identities = 9/18 (50%), Positives = 17/18 (94%) Frame = +2 Query: 542 VYDISTFLDEHPGGGDIM 595 VYD++++++EHPGG +I+ Sbjct: 41 VYDVTSYVEEHPGGDEIL 58 >01_02_0022 + 10290033-10290407,10290497-10290848,10290923-10291070, 10291145-10291225,10291651-10291822,10292120-10292158, 10292384-10292543,10292676-10292779,10292979-10293278 Length = 576 Score = 30.7 bits (66), Expect = 1.1 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +2 Query: 506 HPDDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFL 682 HP + +Y S F + P G ++L Y G +T S S + V+A+DR L Sbjct: 433 HPRSQGVETLGTIYSSSLFPNRAPAGRVLLLNYIGGSTNTGIVSKTESEL-VEAVDRDL 490 >02_04_0395 + 22590097-22590343,22590566-22590921 Length = 200 Score = 29.9 bits (64), Expect = 2.0 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 9/45 (20%) Frame = +1 Query: 565 RRASWRW---------RYNVGVRRPRRKHGFQEFWALSHGC*GSR 672 RR SWRW R +R RR HG E WAL+ G R Sbjct: 30 RRGSWRWIRRHHHRIWRARSWIRSRRRGHGVGEAWALAAATGGGR 74 >08_02_1171 + 24880363-24881355,24882553-24882702,24883505-24884210, 24885012-24885404,24885759-24885805,24886088-24886111 Length = 770 Score = 29.5 bits (63), Expect = 2.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 587 RHRQDARLRMSIYHRHDHK*LSNNHR 510 R R+ A + + YH H H SNNHR Sbjct: 82 RRRRKAMMPVRTYHHHHHHNNSNNHR 107 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,495,756 Number of Sequences: 37544 Number of extensions: 373455 Number of successful extensions: 1066 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1029 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1064 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1744894544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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