BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20966 (687 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical pr... 73 3e-13 AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical ... 67 1e-11 Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical pr... 63 2e-10 AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 50 1e-06 AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 50 1e-06 Z74038-3|CAA98498.2| 89|Caenorhabditis elegans Hypothetical pr... 44 1e-04 Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical pr... 36 0.036 Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical pr... 36 0.036 Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical pr... 29 2.4 Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 29 2.4 Z67755-8|CAE17847.1| 209|Caenorhabditis elegans Hypothetical pr... 27 9.5 >Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical protein D2023.1b protein. Length = 103 Score = 72.5 bits (170), Expect = 3e-13 Identities = 30/58 (51%), Positives = 42/58 (72%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 DDCWI++ + VYD++ F+D HPGG +I+LE+AG DA+ AF S GHS A L +F + Sbjct: 18 DDCWIIVGNYVYDVTKFVDLHPGGPEILLEFAGGDATDAFESVGHSMCARMMLTKFKI 75 >AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical protein W02D3.1 protein. Length = 141 Score = 67.3 bits (157), Expect = 1e-11 Identities = 25/56 (44%), Positives = 41/56 (73%) Frame = +2 Query: 518 CWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 CWIVI +VYD++ FL+EHPGG +++ + AG+DA+ F GHS+ A++ + +L+ Sbjct: 24 CWIVISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFLDVGHSKDAIEMANEYLI 79 >Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical protein C31E10.7 protein. Length = 134 Score = 63.3 bits (147), Expect = 2e-10 Identities = 26/55 (47%), Positives = 38/55 (69%) Frame = +2 Query: 521 WIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685 W+VI ++V+D++ FLDEHPGG +++LE AG D + AF GHS A D +L+ Sbjct: 22 WLVIGNKVFDVTKFLDEHPGGCEVLLEQAGSDGTEAFEDVGHSTDARHMKDEYLI 76 >AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical protein Y52B11A.3b protein. Length = 516 Score = 50.4 bits (115), Expect = 1e-06 Identities = 20/40 (50%), Positives = 28/40 (70%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAF 631 DDCW+ ++ VYD++ +LD HPGG +L AGRDA+ F Sbjct: 33 DDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLF 72 >AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical protein Y52B11A.3a protein. Length = 552 Score = 50.4 bits (115), Expect = 1e-06 Identities = 20/40 (50%), Positives = 28/40 (70%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAF 631 DDCW+ ++ VYD++ +LD HPGG +L AGRDA+ F Sbjct: 69 DDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLF 108 >Z74038-3|CAA98498.2| 89|Caenorhabditis elegans Hypothetical protein F58B4.2 protein. Length = 89 Score = 44.0 bits (99), Expect = 1e-04 Identities = 17/38 (44%), Positives = 28/38 (73%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDAST 625 DD W++ D+VY+++ + ++HPGG I L YAG+D +T Sbjct: 24 DDLWLLFRDKVYNMTPYFNQHPGGLAI-LRYAGKDVTT 60 >Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical protein H13N06.4b protein. Length = 178 Score = 35.5 bits (78), Expect = 0.036 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEY-AGRDASTAFRSSGHSRMAVKALDRFLV 685 D W+ D VYD++ F+ HPGG I+L A D A S ++ ++ L+ + + Sbjct: 95 DRIWVTYKDGVYDVTDFIAMHPGGDKILLAAGAAVDPFWALYSQHKTKEVLEILEGYRI 153 >Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical protein H13N06.4a protein. Length = 541 Score = 35.5 bits (78), Expect = 0.036 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +2 Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEY-AGRDASTAFRSSGHSRMAVKALDRFLV 685 D W+ D VYD++ F+ HPGG I+L A D A S ++ ++ L+ + + Sbjct: 95 DRIWVTYKDGVYDVTDFIAMHPGGDKILLAAGAAVDPFWALYSQHKTKEVLEILEGYRI 153 >Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical protein C25A1.5 protein. Length = 316 Score = 29.5 bits (63), Expect = 2.4 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%) Frame = +2 Query: 545 YDISTFLDEHPGGGDIMLEYAGRDASTAFRSS--------GHSRMAVKALDRFLV 685 YDI+ F +HPGG ++ AG + R HS A L+R+ V Sbjct: 20 YDIADFAPKHPGGAKVLNRLAGEEIGEFIRGEKRIMGVRHEHSEAAYNMLERYNV 74 >Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical protein T05E11.3 protein. Length = 760 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 126 NINKDNTKPSDRVH*LKEPQVCNRSIVLRPR*ETNKLYKSLRTRSSNINL 275 +I KD+ +P VH E +V RSI+ P+ N ++++ NI L Sbjct: 340 SITKDSEEPLSHVHFSAEGEVSFRSILYVPKKSPNDMFQNYGKVIENIKL 389 >Z67755-8|CAE17847.1| 209|Caenorhabditis elegans Hypothetical protein F54F7.8 protein. Length = 209 Score = 27.5 bits (58), Expect = 9.5 Identities = 17/69 (24%), Positives = 30/69 (43%) Frame = +3 Query: 141 NTKPSDRVH*LKEPQVCNRSIVLRPR*ETNKLYKSLRTRSSNINLKLNAKMTTVHTTNEV 320 +T P+ R H + + + + RPR N + +T S N+ + N HTT++ Sbjct: 133 STPPAQRAHPYQMTKDRSDQDLKRPRQRNNSVRSISQTESYNLQVVENRTTPFHHTTDQP 192 Query: 321 NLSAPTPNQ 347 +P Q Sbjct: 193 GKRFESPGQ 201 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,607,171 Number of Sequences: 27780 Number of extensions: 319184 Number of successful extensions: 863 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 838 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 863 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1571291122 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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