Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20966
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81052-7|CAJ58492.1|  103|Caenorhabditis elegans Hypothetical pr...    73   3e-13
AF003141-8|AAK21480.1|  141|Caenorhabditis elegans Hypothetical ...    67   1e-11
Z78539-6|CAB01732.2|  134|Caenorhabditis elegans Hypothetical pr...    63   2e-10
AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical ...    50   1e-06
AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical ...    50   1e-06
Z74038-3|CAA98498.2|   89|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z99942-5|CAI79198.1|  178|Caenorhabditis elegans Hypothetical pr...    36   0.036
Z99942-4|CAB17069.1|  541|Caenorhabditis elegans Hypothetical pr...    36   0.036
Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z67755-8|CAE17847.1|  209|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z81052-7|CAJ58492.1|  103|Caenorhabditis elegans Hypothetical
           protein D2023.1b protein.
          Length = 103

 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 30/58 (51%), Positives = 42/58 (72%)
 Frame = +2

Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685
           DDCWI++ + VYD++ F+D HPGG +I+LE+AG DA+ AF S GHS  A   L +F +
Sbjct: 18  DDCWIIVGNYVYDVTKFVDLHPGGPEILLEFAGGDATDAFESVGHSMCARMMLTKFKI 75


>AF003141-8|AAK21480.1|  141|Caenorhabditis elegans Hypothetical
           protein W02D3.1 protein.
          Length = 141

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 25/56 (44%), Positives = 41/56 (73%)
 Frame = +2

Query: 518 CWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685
           CWIVI  +VYD++ FL+EHPGG +++ + AG+DA+  F   GHS+ A++  + +L+
Sbjct: 24  CWIVISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFLDVGHSKDAIEMANEYLI 79


>Z78539-6|CAB01732.2|  134|Caenorhabditis elegans Hypothetical
           protein C31E10.7 protein.
          Length = 134

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 26/55 (47%), Positives = 38/55 (69%)
 Frame = +2

Query: 521 WIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAFRSSGHSRMAVKALDRFLV 685
           W+VI ++V+D++ FLDEHPGG +++LE AG D + AF   GHS  A    D +L+
Sbjct: 22  WLVIGNKVFDVTKFLDEHPGGCEVLLEQAGSDGTEAFEDVGHSTDARHMKDEYLI 76


>AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3b protein.
          Length = 516

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +2

Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAF 631
           DDCW+ ++  VYD++ +LD HPGG   +L  AGRDA+  F
Sbjct: 33  DDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLF 72


>AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3a protein.
          Length = 552

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +2

Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDASTAF 631
           DDCW+ ++  VYD++ +LD HPGG   +L  AGRDA+  F
Sbjct: 69  DDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLF 108


>Z74038-3|CAA98498.2|   89|Caenorhabditis elegans Hypothetical
           protein F58B4.2 protein.
          Length = 89

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 17/38 (44%), Positives = 28/38 (73%)
 Frame = +2

Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEYAGRDAST 625
           DD W++  D+VY+++ + ++HPGG  I L YAG+D +T
Sbjct: 24  DDLWLLFRDKVYNMTPYFNQHPGGLAI-LRYAGKDVTT 60


>Z99942-5|CAI79198.1|  178|Caenorhabditis elegans Hypothetical
           protein H13N06.4b protein.
          Length = 178

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEY-AGRDASTAFRSSGHSRMAVKALDRFLV 685
           D  W+   D VYD++ F+  HPGG  I+L   A  D   A  S   ++  ++ L+ + +
Sbjct: 95  DRIWVTYKDGVYDVTDFIAMHPGGDKILLAAGAAVDPFWALYSQHKTKEVLEILEGYRI 153


>Z99942-4|CAB17069.1|  541|Caenorhabditis elegans Hypothetical
           protein H13N06.4a protein.
          Length = 541

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 512 DDCWIVIYDRVYDISTFLDEHPGGGDIMLEY-AGRDASTAFRSSGHSRMAVKALDRFLV 685
           D  W+   D VYD++ F+  HPGG  I+L   A  D   A  S   ++  ++ L+ + +
Sbjct: 95  DRIWVTYKDGVYDVTDFIAMHPGGDKILLAAGAAVDPFWALYSQHKTKEVLEILEGYRI 153


>Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical
           protein C25A1.5 protein.
          Length = 316

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
 Frame = +2

Query: 545 YDISTFLDEHPGGGDIMLEYAGRDASTAFRSS--------GHSRMAVKALDRFLV 685
           YDI+ F  +HPGG  ++   AG +     R           HS  A   L+R+ V
Sbjct: 20  YDIADFAPKHPGGAKVLNRLAGEEIGEFIRGEKRIMGVRHEHSEAAYNMLERYNV 74


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 126 NINKDNTKPSDRVH*LKEPQVCNRSIVLRPR*ETNKLYKSLRTRSSNINL 275
           +I KD+ +P   VH   E +V  RSI+  P+   N ++++      NI L
Sbjct: 340 SITKDSEEPLSHVHFSAEGEVSFRSILYVPKKSPNDMFQNYGKVIENIKL 389


>Z67755-8|CAE17847.1|  209|Caenorhabditis elegans Hypothetical
           protein F54F7.8 protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 17/69 (24%), Positives = 30/69 (43%)
 Frame = +3

Query: 141 NTKPSDRVH*LKEPQVCNRSIVLRPR*ETNKLYKSLRTRSSNINLKLNAKMTTVHTTNEV 320
           +T P+ R H  +  +  +   + RPR   N +    +T S N+ +  N      HTT++ 
Sbjct: 133 STPPAQRAHPYQMTKDRSDQDLKRPRQRNNSVRSISQTESYNLQVVENRTTPFHHTTDQP 192

Query: 321 NLSAPTPNQ 347
                +P Q
Sbjct: 193 GKRFESPGQ 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,607,171
Number of Sequences: 27780
Number of extensions: 319184
Number of successful extensions: 863
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)