Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20965
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 190 7e-49
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 190 7e-49
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 190 7e-49
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 190 7e-49
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 190 7e-49
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 190 7e-49
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 190 7e-49
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 190 7e-49
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 190 7e-49
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 190 7e-49
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 189 2e-48
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 120 8e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 108 3e-24
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 108 3e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 107 8e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 107 8e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 96 3e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 94 8e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 4e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 42 6e-04
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 39 0.004
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 39 0.004
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 38 0.010
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 36 0.029
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.48
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 32 0.48
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 0.83
AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical ... 30 1.5
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 2.5
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 29 3.4
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 29 3.4
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 4.4
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 4.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 5.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 28 5.9
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 28 5.9
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 28 5.9
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 28 5.9
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 7.8
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 28 7.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMY 134
Score = 130 bits (313), Expect = 1e-30
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 688 TERG 699
TERG
Sbjct: 195 TERG 198
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMY 134
Score = 130 bits (314), Expect = 1e-30
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 688 TERG 699
TERG
Sbjct: 195 TERG 198
Score = 107 bits (257), Expect = 8e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMY 134
Score = 130 bits (313), Expect = 1e-30
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 688 TERG 699
TERG
Sbjct: 195 TERG 198
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMY 134
Score = 130 bits (313), Expect = 1e-30
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 688 TERG 699
TERG
Sbjct: 195 TERG 198
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMY 134
Score = 130 bits (313), Expect = 1e-30
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 688 TERG 699
TERG
Sbjct: 195 TERG 198
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMY 134
Score = 130 bits (314), Expect = 1e-30
Identities = 62/64 (96%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 688 TERG 699
TERG
Sbjct: 195 TERG 198
Score = 105 bits (253), Expect = 2e-23
Identities = 45/51 (88%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMY 134
Score = 130 bits (313), Expect = 1e-30
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 688 TERG 699
TERG
Sbjct: 195 TERG 198
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMY 90
Score = 130 bits (313), Expect = 1e-30
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 91 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 150
Query: 688 TERG 699
TERG
Sbjct: 151 TERG 154
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMY 120
Score = 130 bits (313), Expect = 1e-30
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 121 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 180
Query: 688 TERG 699
TERG
Sbjct: 181 TERG 184
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +3
Query: 162 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 190 bits (464), Expect = 7e-49
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPKANREKMTQIMFETFNTPAMY
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMY 134
Score = 130 bits (313), Expect = 1e-30
Identities = 61/64 (95%), Positives = 64/64 (100%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+AIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL
Sbjct: 135 VAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
Query: 688 TERG 699
TERG
Sbjct: 195 TERG 198
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 189 bits (460), Expect = 2e-48
Identities = 83/86 (96%), Positives = 86/86 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 430
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 431 APLNPKANREKMTQIMFETFNTPAMY 508
APLNPK+NREKMTQIMFETFNTPAMY
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMY 133
Score = 124 bits (298), Expect = 9e-29
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 514 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 693
IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTE
Sbjct: 136 IQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTE 195
Query: 694 RG 699
RG
Sbjct: 196 RG 197
Score = 102 bits (244), Expect = 3e-22
Identities = 45/49 (91%), Positives = 49/49 (100%)
Frame = +3
Query: 114 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 120 bits (290), Expect = 8e-28
Identities = 49/84 (58%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 436
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 437 LNPKANREKMTQIMFETFNTPAMY 508
LNP NRE+ +I FETFN PA+Y
Sbjct: 114 LNPLKNRERSAEIFFETFNVPALY 137
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/68 (63%), Positives = 55/68 (80%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L
Sbjct: 138 IQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLL 197
Query: 688 TERGLLVH 711
G H
Sbjct: 198 RREGYEFH 205
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 248
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 364
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 364
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 107 bits (257), Expect = 8e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 84.2 bits (199), Expect = 8e-17
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 364
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 107 bits (257), Expect = 8e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 260
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +2
Query: 251 GKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 355
G+KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 95.9 bits (228), Expect = 3e-20
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +2
Query: 236 RDGRYGKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 412
R G KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 413 PVLLTEAPLNPKANREKMTQIMFETFNTPAMY 508
+LLTE PLNP +NREKM Q+MFE + ++Y
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIY 137
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +1
Query: 508 LAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 687
+A+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L
Sbjct: 138 VAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLL 197
Query: 688 TERG 699
+RG
Sbjct: 198 LQRG 201
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 132 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 224
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 94.3 bits (224), Expect = 8e-20
Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 260 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 436
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 437 LNPKANREKMTQIMFETFNTPAMY 508
LN NRE +IMFE+FN P +Y
Sbjct: 124 LNTPENREYTAEIMFESFNVPGLY 147
Score = 61.3 bits (142), Expect = 7e-10
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 8/71 (11%)
Frame = +1
Query: 508 LAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 663
+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I + +AGRD+
Sbjct: 148 IAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDI 207
Query: 664 TDYLMKILTER 696
T ++ +L +R
Sbjct: 208 TYFIQSLLRDR 218
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 108 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 215
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 68.5 bits (160), Expect = 4e-12
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +2
Query: 320 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 499
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 500 AMY 508
A Y
Sbjct: 154 AYY 156
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/65 (35%), Positives = 44/65 (67%)
Frame = +1
Query: 502 HVLAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 681
+ L+ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L +
Sbjct: 155 YYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQ 214
Query: 682 ILTER 696
+L ++
Sbjct: 215 MLDQQ 219
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 117 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 215
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 224 PPSGRDGRYGKKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 397
P S ++ KK +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 398 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYSPS 517
+ LT+ A + ++I+F+ F ++ S
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTS 127
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 559 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGLLV 708
+V+DSG + G + +++R+D+ G+ LT+ L ++ R L V
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYRQLNV 195
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 224 PPSGRDGRYGKKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 397
P S ++ KK +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 398 APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYSPS 517
+ LT+ A + ++I+F+ F ++ S
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTS 127
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 559 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGLLV 708
+V+DSG + G + +++R+D+ G+ LT+ L ++ R L V
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYRQLNV 195
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = +2
Query: 401 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPAT 580
P P + +P P T + T +T A +P P S T P VPPV+ TP T
Sbjct: 629 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 688
Query: 581 VSPTPCPSTKDT 616
+ T +T T
Sbjct: 689 TTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = +2
Query: 401 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPAT 580
P P + +P P T + T +T A +P P S T P VPPV+ TP T
Sbjct: 685 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 744
Query: 581 VSPTPCPSTKDT 616
+ T +T T
Sbjct: 745 TTSTTTTTTTTT 756
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 517 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 690
Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLS 366
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 485 TFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDT 616
T +T A +P P S T P VPPV+ TP T + T +T T
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 485 TFNTPAMYSPSKPCSRCTRPVVPPVSCWT--PATVSPTPCPSTKDTHSPTPSC 637
T +P+ P+ P P VPP T P TVS P PS PT SC
Sbjct: 351 TIPSPSKVVPNPPQKSLITPTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Frame = +2
Query: 425 TEAPLNPKANREKMTQIMFETFNTPAMYSPSK----PCSRCTRPVVPPVSCWTPATVSPT 592
T P E T ET TP +P+ P + T P + T T +PT
Sbjct: 96 TTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPT 155
Query: 593 PCPSTKDTHSPTPSCVWT*P 652
+T T + TP+ T P
Sbjct: 156 TTTTTPTTTTTTPTTTTTTP 175
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +2
Query: 437 LNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDT 616
++PK + T T +T +P+ P + T P TP T + TP +T+ T
Sbjct: 53 ISPKWVKADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTT---TPTTTTTTPTTTTETT 109
Query: 617 HSPTPSCVWT 646
+PT T
Sbjct: 110 TTPTTETTTT 119
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = +2
Query: 413 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVSPT 592
P T AP T T P + + P + T P + TP T + T
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTT-TTTTPTTTTTTTTTPTTTTTTPTTTT-T 246
Query: 593 PCPSTKDTHSPTPS 634
P +T +T + TP+
Sbjct: 247 PATTTSETTTTTPT 260
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Frame = +2
Query: 425 TEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVS--PTPC 598
T P T ET TP + + T P + TP T + PT
Sbjct: 119 TPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTT 178
Query: 599 PSTKDTHSPTPSCVWT*P 652
+T T + TP+ T P
Sbjct: 179 TTTPTTTTTTPTTTTTAP 196
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 443 PKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKD--T 616
P N E ++Q+ +T + +SP P PP P T +PTP TKD
Sbjct: 337 PVENNETLSQV--KTVSKALSHSPKSPKKNSQEKSAPPSPKLPPKTTAPTP---TKDGGN 391
Query: 617 HSP 625
HSP
Sbjct: 392 HSP 394
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +2
Query: 503 MYSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 634
M+ P R P TP+ +P+P T +PTP+
Sbjct: 291 MFRNLNPFDRTPTPTTKKTQSVTPSNSTPSPAKPATPTKTPTPT 334
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 509 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 625
SP P + P +PP + T T + PCP T++P
Sbjct: 123 SPPAPVDQKPPPCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/67 (34%), Positives = 29/67 (43%)
Frame = +2
Query: 446 KANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 625
K+ +E T I F T P + S S T +VP S T T + TP P T T P
Sbjct: 428 KSTKEPKTTI-FTTTPVPCPTTTSTTTSATT--LVPTTSSSTTTTTTTTPVPVTSTTTEP 484
Query: 626 TPSCVWT 646
T + T
Sbjct: 485 TTTTYTT 491
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.83
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 485 TFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVS--PTPCPSTKDTHSPTPSCVWT*P 652
TFN S KP + T P + TP T + PT +T T + TP+ T P
Sbjct: 73 TFNAVCDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 130
>AC006630-3|AAK68325.1| 257|Caenorhabditis elegans Hypothetical
protein F14H12.3 protein.
Length = 257
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 497 PAMYSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 637
P + PC+ C +P P +C T V TP P T T P+C
Sbjct: 182 PCPQQAACPCTTCNQPPPPCNTCNTQPVVIVTPAPCT--TCYQPPAC 226
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 425 TEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 604
T AP P+ + T + T + P SP+ P R T P+ T A + P+P P
Sbjct: 285 TAAPTTPRLTTARATTPLATT-SRPTTPSPTTP--RATTPLATTPLATTRAPLPPSPPPR 341
Query: 605 TKD---THSPT 628
T T +PT
Sbjct: 342 TSKRPVTQAPT 352
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 416 VLLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPP 556
V++TE P++ +F++FN + PSK ++ +PV PP
Sbjct: 31 VIITECPIDFPEYEFSKNPALFKSFNDNPEFKPSKKKNK-PKPVFPP 76
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 567 GLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRAR 698
G+ RR R R+PPR + SR+R R P R R
Sbjct: 394 GMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRR 437
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 416 VLLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPP 556
V++TE P++ +F++FN + PSK ++ +PV PP
Sbjct: 31 VIITECPIDFPEYEFSKNPALFKSFNDNPEFKPSKKKNK-PKPVFPP 76
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 416 VLLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPP 556
V++TE P++ +F++FN + PSK ++ +PV PP
Sbjct: 31 VIITECPIDFPEYEFSKNPALFKSFNDNPEFKPSKKKNK-PKPVFPP 76
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +2
Query: 512 PSKPCSRCTRPVVPPVSCWTPATVSPTPC--PSTKDTHSPTPSC 637
P P S C P P C P PC P T SP C
Sbjct: 92 PPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCC 135
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 542 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 631
P++PP PA V T P+T++T P P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVP 124
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +2
Query: 434 PLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKD 613
P A+ +T + +PA Y P+ SR P V P P + P+ P
Sbjct: 420 PSPSPASNVPVTITLSAPAKSPATYGPAPEPSRPAVPPVAPAPSVIPTSSQPSQ-PKQTQ 478
Query: 614 THSPTPS 634
PTPS
Sbjct: 479 PAQPTPS 485
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Frame = +2
Query: 425 TEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVV------PPVSCWTPATVS 586
TE P + + + T ET +T S + P T PP S TP +
Sbjct: 178 TEPPSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTT 237
Query: 587 PTPCPSTKDTHSPTPS 634
T P T T SP+ S
Sbjct: 238 TTTAPETTSTESPSSS 253
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 536 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 634
T PP S TP + T P T T SP+ S
Sbjct: 497 TTSTEPPSSSTTPVQTTTTTAPETTSTESPSSS 529
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 518 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 628
KP + T P P S T T +P P ST + S T
Sbjct: 596 KPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTT 632
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 518 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 628
KP + T P P S T T +P P ST + S T
Sbjct: 596 KPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTT 632
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 497 PAMYSPSKPCSR-CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 631
PA+ SP+ P S C+ P S A P P P T P P
Sbjct: 34 PAVGSPAIPSSSSCSEPSTSQASTVVSAPTLPPPSPLTSLPQKPAP 79
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 497 PAMYSPSKPCSR-CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 631
PA+ SP+ P S C+ P S A P P P T P P
Sbjct: 108 PAVGSPAIPSSSSCSEPSTSQASTVVSAPTLPPPSPLTSLPQKPAP 153
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 413 PVLLTEAPLNPKAN---REKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATV 583
P L P+ P N R K ++ F T T +PS P T PV+ P + A
Sbjct: 610 PTDLPPPPVWPAPNFDRRRKSSETSFTTNTTTNTLTPSTPV---TPPVLRPAFSESKAPQ 666
Query: 584 SPTPCPSTKDTHSP 625
P+ TK+ + P
Sbjct: 667 EPSKPVETKENNKP 680
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 413 PVLLTEAPLNPKAN---REKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTPATV 583
P L P+ P N R K ++ F T T +PS P T PV+ P + A
Sbjct: 512 PTDLPPPPVWPAPNFDRRRKSSETSFTTNTTTNTLTPSTPV---TPPVLRPAFSESKAPQ 568
Query: 584 SPTPCPSTKDTHSP 625
P+ TK+ + P
Sbjct: 569 EPSKPVETKENNKP 582
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +2
Query: 395 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWTP 574
VAP PV + P+ P + + + Q P + P P + +PVVP VS TP
Sbjct: 1474 VAPVAQPVQPIQ-PVQPVQSVQSLPQ----PAEIPRVVVPQSPGT--PQPVVPQVSIVTP 1526
Query: 575 ATVSPTPCPSTKDTHSPTP 631
PT ++ T P
Sbjct: 1527 QAPQPTAAATSASTGPIAP 1545
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 27.9 bits (59), Expect = 7.8
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Frame = +2
Query: 242 GRYGKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPV 418
G YG+K Y + + K + +H + T + H + L+ + P P
Sbjct: 301 GDYGQKVQYNKEHWRQKTSSGEFVFTTQHPLFTTTEYGATPRRHKVIDILKSLIPPNLPS 360
Query: 419 LLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVV-PPVSCWTPATVSPTP 595
LT A L ++E + +++NTPA+ +P ++ V P + P T P
Sbjct: 361 QLT-ALLENSYDKEIFAET--QSYNTPAVATPMSNIYATSQAVYQPEIVTIAPKTTMIPP 417
Query: 596 CPSTKDTHSPT 628
P K T+ P+
Sbjct: 418 QP-VKITYRPS 427
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 407 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYSPSKPCSRCTRPVVPPVSCWT 571
E + EA LN + M QI E P PS+PC C + + C T
Sbjct: 297 EEAMRAREATLNTTP-QSSMAQIKQEPSYIPPPIDPSRPCDSCEKTGGEMICCAT 350
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 162 KAGFAGDDAPRAVFPSIVGRPRHQG 236
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,768,551
Number of Sequences: 27780
Number of extensions: 468594
Number of successful extensions: 2222
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2185
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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