Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20965
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    24   1.7  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    24   1.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.7  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    22   6.7  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   6.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   8.9  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   8.9  

>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 218 KAPPSGRDGRYGKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 352
           K  P G  G  GKK      E   KRG++  +  ++    T +DD
Sbjct: 180 KRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 203 PLDRGKAPPSGRDGRYGKKDSYVGDEAQSKR 295
           P D  K  P G  G  GKK S+  D+   KR
Sbjct: 81  PEDINKRAPMGFQGMRGKKASF--DDEYYKR 109


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 218 KAPPSGRDGRYGKKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 352
           K  P G  G  GKK      E   KRG++  +  ++    T +DD
Sbjct: 180 KRAPMGFYGTRGKKIILDALEELDKRGVMDFQIGLQRKKDTTFDD 224



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 203 PLDRGKAPPSGRDGRYGKKDSYVGDEAQSKR 295
           P D  K  P G  G  GKK S+  D+   KR
Sbjct: 81  PEDINKRAPMGFQGMRGKKASF--DDEYYKR 109


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 389  LRVAPEEHPVLLTEAPLNPKANREKM 466
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 531 AVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRP 662
           ++  +++HR        C P   +L +I + P HP +  S S P
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPAS-STSLP 104


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 488 FNTPAMYSPSKPC 526
           FNT  ++ P KPC
Sbjct: 223 FNTTTIFVPVKPC 235


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 203 PLDRGKAPPSGRDGRYGKKDSYVGDEAQSKR 295
           P D  K  P G  G  GKK S+  D+   KR
Sbjct: 82  PEDINKRAPMGFQGMRGKKASF--DDEYYKR 110


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 203 PLDRGKAPPSGRDGRYGKKDSYVGDEAQSKR 295
           P D  K  P G  G  GKK S+  D+   KR
Sbjct: 81  PEDINKRAPMGFQGMRGKKASF--DDEYYKR 109


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 62  IKRPAVTANREKQIPIAGR 6
           IK P + ANR K   IAG+
Sbjct: 284 IKLPKLAANRAKLEEIAGK 302


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 153 GMCKAGFAGD 182
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,141
Number of Sequences: 438
Number of extensions: 5796
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)