Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20963
(745 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 61 1e-09
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 54 2e-07
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 53 3e-07
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 52 5e-07
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 50 2e-06
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 48 6e-06
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 46 3e-05
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 44 1e-04
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 44 1e-04
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 42 5e-04
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 42 7e-04
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 42 7e-04
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 41 0.001
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 40 0.002
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 40 0.002
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 40 0.002
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 40 0.003
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 39 0.004
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 38 0.009
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 37 0.020
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 36 0.035
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 36 0.035
SB_3091| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 35 0.061
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 34 0.14
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 33 0.18
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 33 0.32
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 32 0.56
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 31 0.75
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 31 0.99
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 30 2.3
SB_41039| Best HMM Match : DUF1508 (HMM E-Value=3.1) 30 2.3
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51651| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 4.0
SB_46833| Best HMM Match : MGS (HMM E-Value=1.5e-19) 29 4.0
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 29 5.3
SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25) 29 5.3
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_50329| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 7.0
SB_51771| Best HMM Match : Gal_Lectin (HMM E-Value=3.1e-23) 28 9.2
SB_51770| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23) 28 9.2
SB_5078| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23) 28 9.2
SB_57428| Best HMM Match : Gal_Lectin (HMM E-Value=1.7e-23) 28 9.2
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_49597| Best HMM Match : Gal_Lectin (HMM E-Value=9e-23) 28 9.2
SB_47571| Best HMM Match : Gal_Lectin (HMM E-Value=1.7e-23) 28 9.2
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_40636| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-22) 28 9.2
SB_34737| Best HMM Match : Gal_Lectin (HMM E-Value=1.7e-23) 28 9.2
SB_30196| Best HMM Match : Gal_Lectin (HMM E-Value=6.1e-24) 28 9.2
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 28 9.2
SB_25911| Best HMM Match : Gal_Lectin (HMM E-Value=8.1e-37) 28 9.2
SB_25910| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23) 28 9.2
SB_25909| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23) 28 9.2
SB_21670| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-17) 28 9.2
SB_21403| Best HMM Match : Gal_Lectin (HMM E-Value=1.6e-20) 28 9.2
SB_21402| Best HMM Match : Gal_Lectin (HMM E-Value=9.2e-24) 28 9.2
SB_18612| Best HMM Match : DUF1186 (HMM E-Value=2.4) 28 9.2
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
++VGN+ + QL+E FS+ GPV S R+VFDR TG KGYGF E+ A A
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSA 82
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
RLYVG+L + + ++ F FG V S ++++D T SKGYGF++F AA A
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +2
Query: 335 LAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSA 475
LA + R L E+FS+ G V R++ DR++ SKG +IEFT SA
Sbjct: 153 LARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSA 199
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF-TSPSAAADATN 493
+L+VG + + G LR++F+QFG ++ A V+ DR T SKGYGF+ TS +A N
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKN 70
Query: 494 KQ 499
K+
Sbjct: 71 KR 72
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 52.0 bits (119), Expect = 5e-07
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+++GNL + + LRE F+ G V+S R++ DR TG+ KG+G++ F S A A
Sbjct: 58 VFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFA 113
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ LY+ NL + +LRE FS +G + SA+V+ D G SKG+GF+ F+SP A A
Sbjct: 210 QGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKA 268
Query: 488 TNKQIHTLKVS 520
+ + +S
Sbjct: 269 VTEMNGRILIS 279
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATN 493
+YV N + Q++E ++ G + S +V+ D G SKG+GF+ F +P A +A N
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAVN 167
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/73 (28%), Positives = 40/73 (54%)
Frame = +2
Query: 293 MASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPS 472
M+ + + ++++G L W L++YFSQ+G + V+ R G S+G+GF+ + S
Sbjct: 43 MSESEKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDC-VIMKRD-GRSRGFGFVTYESSD 100
Query: 473 AAADATNKQIHTL 511
+ + K+ H L
Sbjct: 101 SVNEVLKKKDHVL 113
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +2
Query: 233 LQGFDRRSSLHLLEIVSL*VMASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVV 412
+ G +S+H+ +VS V S + +++G L + Q++E S FG +++ +V
Sbjct: 649 IPGMSENASVHVPGVVSTVVPDSPHK---IFIGGLPNYLNEDQVKELLSSFGELRAFNLV 705
Query: 413 FDRSTGLSKGYGFIEF 460
D +TGLSKGY F E+
Sbjct: 706 KDSATGLSKGYAFCEY 721
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/75 (37%), Positives = 39/75 (52%)
Frame = +2
Query: 293 MASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPS 472
+A + A +YVG L V + E F Q GPV + + DR T L +GYGF+EF
Sbjct: 6 IAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLG-E 64
Query: 473 AAADATNKQIHTLKV 517
AD K ++ +KV
Sbjct: 65 EDADYAIKVMNMIKV 79
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
+L+VG L++ L+EYFS++G + + D TG +G+ F++F S A
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEA 83
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQ-FGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAAD 484
R +++VG L ++REYF + + PV+ + + S+ +G+ F+ F S
Sbjct: 101 RVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDK 160
Query: 485 ATNKQIHTLK 514
Q H ++
Sbjct: 161 ICETQFHNIE 170
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAA 481
T + +LYV +L V ++E FS +G V++ + DR+ LS+G+ ++E+ P
Sbjct: 1153 TPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECE 1212
Query: 482 DA 487
A
Sbjct: 1213 KA 1214
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
L+V NL + ++ E FS+ G V+ R+V +R+ G KGYG++E+ S+A+ A
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRA-GKPKGYGYVEYEQESSASTA 227
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
R +LY+GNL + ++ + F +FG V+ ++ D+ +G S+G+GF+ S A A
Sbjct: 7 RGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPA 65
Query: 488 TNK 496
K
Sbjct: 66 IEK 68
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
AA L V NL V + L + FSQFG V+ A VV D G SKG+G +EF+ + A +A
Sbjct: 125 AAALRVKNLDNLVTNELLEQAFSQFGDVERAVVVCD-VRGRSKGHGIVEFSRKNNAHNAM 183
Query: 491 NK 496
K
Sbjct: 184 QK 185
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
L+VGNL + Q + S +G ++ +V TG SKGYGF+E+ + A A +
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 500 IHT 508
++T
Sbjct: 175 LNT 177
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 362 LREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
++E FSQ G V A+V + + G S+G+ F+++ + A
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEA 260
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ A LYV N+ + + R+ F +G + + R++ D+STGL KG GF+ + + A A
Sbjct: 131 KGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAA 190
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
LYV N+ + + F Q G V +++D KG+ F+ + A +A
Sbjct: 277 LYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNA 332
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
A+L+VG L + LREYF +G + V+ D +T S+G+G++ F
Sbjct: 14 AKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
LY+ L L ++G + S + + D+ T L KGYGF++F SP +A A
Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKA 157
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFI 454
R Y+GNL+++V + L E F V RV+ DR TG +G+GF+
Sbjct: 83 RCYIGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFV 127
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
++VG LA L++YF QFG V+S R++ G S+ YGF+ F + + K
Sbjct: 82 VFVGGLASGTDEEGLKDYFEQFGEVESVRIM-RTFLGYSRNYGFVLFKDDGPSKEVLKKS 140
Query: 500 IHTLKVST 523
H + T
Sbjct: 141 -HVINGKT 147
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
R L+V NL+ + YF +G V ++ DR TG SKG G ++ P
Sbjct: 317 RERTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKI 376
Query: 488 TNKQIHTL 511
+ +H +
Sbjct: 377 LEEPVHVI 384
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIE 457
+YVG L + +RE+F +FG +++ + + + S G G E
Sbjct: 159 IYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTGXXXXE 204
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATN 493
+Y+G++ +++++F QFG V R+ + + SKGY F+EF A A +
Sbjct: 100 IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAAD 157
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPS 472
R++ G+L V L F+++ A++V D+ + SKGYGF+ F P+
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPN 269
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 305 ARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
A R+YVG++ + + +R F FGP+ + +D KG+ F+E+ P AA
Sbjct: 99 ALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAA 156
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
AR+Y+ ++ + ++ F FG V + + TG KGYGFIE+ + +A DA
Sbjct: 199 ARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDA 256
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
R++V +LR +F ++G V+ +++V D+ G+SKGY FI F S A
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVA 61
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 323 YVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF---TSPSAAADATN 493
YVG LA V + L F FG + ++ D +T +G+GF+EF +AA D N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 494 K 496
+
Sbjct: 68 E 68
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 362 LREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQIHTLK 514
LR F FG ++ ++V D T +KGYG+++F S AA A +LK
Sbjct: 69 LRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALENCDKSLK 119
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKG 442
+++VGN+ + V R+L+++F FG V A+++ DR SKG
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+YVGNL +++ + L + F ++G V ++ D+ T S+G FI F +A +A
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNA 67
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
L V L + +++EYF++FG + V D +T S+G+GF+ F
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRF 163
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT-- 490
+L+VG L + + L EYF+QFG V + + +GF+ F S +
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYI-----PKPFRHFGFVTFASVANCVSIAFE 254
Query: 491 NKQIHTLKVST 523
N I KV T
Sbjct: 255 NMNIERTKVCT 265
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +2
Query: 269 LEIVSL*VMASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYG 448
L ++S + S + R+YVGNL V + L + F ++G + A V G +
Sbjct: 246 LSLMSSNMNRSNSNDCRVYVGNLPQDVREKDLHDIFYKYGHI--ADVDLKNRRGAGPPFA 303
Query: 449 FIEFTSPSAAADA 487
F+EF P A DA
Sbjct: 304 FVEFEDPRDAEDA 316
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 359 QLREYFSQFGPVQSARVVFDRSTGLSKG 442
+L +FS FGPV R+V DR TGL+KG
Sbjct: 1081 ELETFFSNFGPVADVRIVCDRRTGLNKG 1108
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +2
Query: 344 TVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK------QIH 505
++ +++ F G V S +++ DR+TG S GY F+ + +P A A + Q
Sbjct: 37 SMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNK 96
Query: 506 TLKVS 520
TLKVS
Sbjct: 97 TLKVS 101
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATN 493
+++G L+ V L E F++FGPV+ ++ D S G S+ GF+ F S S A+A N
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRDES-GKSRQSGFVHFWS-SDVAEAAN 581
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 37.9 bits (84), Expect = 0.009
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +2
Query: 377 SQFGPVQSARVVFDRSTGLSKGYGFIEFTSP 469
S GP+++ R+ D++TG + +GF+EF+SP
Sbjct: 478 SNAGPLENVRIPTDKNTGQQRSFGFVEFSSP 508
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 305 ARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSK--GYGFIEFTSPSAA 478
++ +RL + NLA+ L+E FS FG V A V + ++ G+GF++FT+ A
Sbjct: 244 SKKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDA 303
Query: 479 ADA 487
A A
Sbjct: 304 AKA 306
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTS 466
+++ NL++ + + F QFG + +VV D T SKG F+++ S
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRS 466
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 35.9 bits (79), Expect = 0.035
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A + V NL+ L+E F GP+ + D+ T SKG+ FI F AA A
Sbjct: 181 ATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARA 238
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 35.9 bits (79), Expect = 0.035
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 362 LREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSA 475
LR++F +FG ++ V+ D T S+G+GF+ F P A
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKA 161
Score = 28.7 bits (61), Expect = 5.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPV 394
++++G L+ +++YFSQFG V
Sbjct: 184 KIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_3091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 35.5 bits (78), Expect = 0.046
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 629 QSPLDSLFNKAADHLRKITNKLDNGQLLELYGLFKQGTE 745
Q + LF +A D++R + N D +LL YGLFKQ TE
Sbjct: 10 QECVQDLFAQATDYVRSLKNLRDEQKLL-FYGLFKQATE 47
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 35.1 bits (77), Expect = 0.061
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
L+V L L FS+FG + S V+ D+ TG S Y FIEF
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEF 168
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 34.7 bits (76), Expect = 0.080
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
L V NL + L++ F ++G + + DR+T S+G+ F+ F A DA
Sbjct: 18 LKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDA 73
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
LYVG L V + LR++F QFG ++S +V + F+ FTS +AA A ++
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELRSISMV------PRQNCAFVCFTSRAAAEAAADRS 359
Query: 500 IHTL 511
+ L
Sbjct: 360 FNKL 363
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
++ + N+ ++G Q+ E+FS G + S + + T KG+ + F S + A + K
Sbjct: 122 KVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKK 181
Query: 497 QIH 505
+ H
Sbjct: 182 RKH 184
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATN 493
+++++G + +L F + G + R++ D +GL+KG+ F F++ A +A
Sbjct: 152 SQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVK 211
Query: 494 K 496
K
Sbjct: 212 K 212
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSAR 406
++VGNL T+ + L++YFS++G V+S R
Sbjct: 23 VFVGNLPLTLKKKALKKYFSKYGEVESVR 51
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTS 466
+++GNL++ L +F + G + RV+ G S+G+G+ +FTS
Sbjct: 182 VFLGNLSFDADEETLAAFFEEKGLSATCRVI--TQEGRSRGFGYADFTS 228
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 383 FGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
F +A+V+FDR +G S+G+GF+++ A
Sbjct: 309 FEGCSNAKVIFDRESGESRGFGFVDYDDVETA 340
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
R ++VG + + +L F GP+ R++ D G ++GY F+ +TS A
Sbjct: 72 RGCEVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDA 127
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+++G + +L + G ++ R+ D +TGL+KG+ F FT ++A A
Sbjct: 155 VFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQA 210
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIE----FTSPSAAADA 487
+YVGNL V +L++ FSQ+G + +V D+ G TS +
Sbjct: 617 VYVGNLPPDVKDYELQQMFSQYGSILETKVFADKGYAFINARGEKRRQRCLTSSRRHGNN 676
Query: 488 TNKQIHTLKVST 523
+N +HTL +T
Sbjct: 677 SNTTLHTLAPTT 688
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 407 VVFDRSTGLSKGYGFIEFTSPSAAADATNKQIHTL 511
++FD++T +G+GF+ F S ++A A + Q H +
Sbjct: 2 LMFDKATQRHRGFGFVTFESENSADKACDTQYHLI 36
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 335 LAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
L + H L++ FS+FG V + + G KG+ FIEF S A
Sbjct: 95 LPFHADHDWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQA 142
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
R+Y+G L + ++++F +G + ++ L GYGF+EF A DA
Sbjct: 4 RVYLGRLPYGTREDDVKKFFYTYGRFKIREII------LKDGYGFVEFDYSDDAEDA 54
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
R+Y+G L + +R +F +G + R L YGF+EF A DA
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRL--------RDINLKNNYGFVEFEDDRDADDA 52
>SB_41039| Best HMM Match : DUF1508 (HMM E-Value=3.1)
Length = 137
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 593 PDYPDSDFSDEDQSPLDSLFNKAADHLRKITNKLDNGQLLELYGLFK 733
P P SD S +DS+ + + D L KLD +++ELY +K
Sbjct: 45 PCKPRSDLGSYSSSIVDSVSSYSIDELVVWERKLDAEEVIELYDYYK 91
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 362 LREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAAD 484
L+E ++ + R+V ++ G ++G+GF+EF +P AA +
Sbjct: 348 LQELYAAEVAFRDVRIVRNK-IGYTRGFGFVEFDTPEAAKE 387
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGY 445
+A ++++G LA+ L+EYFS +G V+ + + SK +
Sbjct: 198 SANDGKVFIGGLAFGTTEEDLKEYFSTYGMVEVKKAEYRERGQQSKDH 245
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 413 FDRSTGLSKGYGFIEFTSPSAAADATNKQIHTLKVST 523
F+R + KG+GF+ F P+ K+ H L T
Sbjct: 134 FERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKT 170
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 407 VVFDRSTGLSKGYGFIEFTSPSAAADA 487
VV+DR T S+ +G++ F AADA
Sbjct: 7 VVYDRETRRSRNFGYVTFRDEQDAADA 33
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATN 493
+R+Y+GN+ R++ F FGP++ V + G+ F F A DA
Sbjct: 2 SRVYIGNIGDNASKREIEREFETFGPLRDVWVARN-----PPGFAFCVFEDRRDAEDAVR 56
Query: 494 K 496
+
Sbjct: 57 E 57
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
L+VGNL + + LR F +FG V + + G Y F++F AA A
Sbjct: 239 LFVGNLETGISCQDLRLSFEKFGVVLDVDIK-RPARGQGNTYAFVKFADLDVAAKA 293
>SB_51651| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 431
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 247 SAKLLTPVGNSIIIGYGQYGKSSPPVCRQPCLDSWPSTTTRIFLT 381
S+ +L+P NS +S P QPCL W +FLT
Sbjct: 27 SSTVLSPWPNSTYNSTSPLSTNSTPARVQPCLTEWLGIWALVFLT 71
>SB_46833| Best HMM Match : MGS (HMM E-Value=1.5e-19)
Length = 648
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/104 (26%), Positives = 45/104 (43%)
Frame = +2
Query: 368 EYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQIHTLKVST*VFNCKII 547
++ S FG ARVVF T L FIE + +A+ T K HT ++ + K +
Sbjct: 224 DFHSYFGCTVHARVVFTTLTSLDGLAKFIEPSQLTASLGGTLKYDHTDWLNMRLALEKFL 283
Query: 548 RYSEF*LVFKMAEALPDYPDSDFSDEDQSPLDSLFNKAADHLRK 679
Y L+ K+ E +F++ D + K H++K
Sbjct: 284 -YEAMALLSKLDEIQDGLSKDEFAETQDGLKDQI--KKNHHVKK 324
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 362 LREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+R+ FS+FG + + ++ L++GY F+EF++ S A A
Sbjct: 94 IRKVFSKFGQIVTEHYPMEKD--LTRGYIFLEFSNASDAVRA 133
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVF---DRSTGLSKGYGFIEFTSPSAAADA 487
+L++GNL + + + QFG ++ + +F + G +GY F+EF A A
Sbjct: 388 KLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKA 447
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/56 (21%), Positives = 28/56 (50%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+Y+ + + L F +G ++ ++ + TG SKG+G++ + + +A A
Sbjct: 65 IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIRTQ-TGKSKGFGYVTYENAESAQRA 119
>SB_20574| Best HMM Match : Extensin_2 (HMM E-Value=0.25)
Length = 1508
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 584 EALPDYPDSDFSDEDQSPLDS-LFNKAADHLRKITNK 691
+ALP P SD SDED +PL+S L K + + +I NK
Sbjct: 127 DALPGSPISDLSDED-TPLNSRLSTKNSTNPGRIMNK 162
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 305 ARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAAD 484
+R+ R+Y G L R L ++ +G V R + GYGF+EF A D
Sbjct: 2 SRSTRVYFGRLPRDCRERDLEKFVRGYGRV--------REISMKLGYGFVEFDDYRDADD 53
>SB_50329| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 334
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 196 WTWTRSVKALVLTTGL*SAKLLTPVGNSIIIGYGQYGKSSPPVC-RQP 336
W +R ++ V L A ++TPV + +G S PVC R+P
Sbjct: 179 WRHSRQIRLEVQAVNLREASVVTPVDHDTAVGKVSAAAVSGPVCLRKP 226
>SB_51771| Best HMM Match : Gal_Lectin (HMM E-Value=3.1e-23)
Length = 100
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 21 LRCPKGKVIVVAYANYGRTAKGVCR 45
>SB_51770| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23)
Length = 216
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 137 LRCPKGKVIVVAYANYGRTAKGVCR 161
>SB_5078| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23)
Length = 216
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 137 LRCPKGKVIVVAYANYGRTAKGVCR 161
>SB_57428| Best HMM Match : Gal_Lectin (HMM E-Value=1.7e-23)
Length = 100
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 21 LRCPKGKVIVVAYANYGRTAKGVCR 45
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +2
Query: 305 ARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAAD 484
+R +L+VG L+ R L F +G + L YGFIE+ P A +
Sbjct: 3 SRGTQLFVGRLSKETKLRDLENVFYLYGKLLRC--------DLKTAYGFIEYEDPRDAEE 54
Query: 485 ATNKQ 499
A ++
Sbjct: 55 AMRRE 59
>SB_49597| Best HMM Match : Gal_Lectin (HMM E-Value=9e-23)
Length = 122
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 43 LRCPKGKVIVVAYANYGRTAKGVCR 67
>SB_47571| Best HMM Match : Gal_Lectin (HMM E-Value=1.7e-23)
Length = 100
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 21 LRCPKGKVIVVAYANYGRTAKGVCR 45
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 344 TVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGF 451
TV ++ EY S G A ++ D+ TG++ GF
Sbjct: 37 TVALKKADEYLSVHGDKADASIIHDKETGITTKIGF 72
>SB_40636| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-22)
Length = 124
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 45 LRCPKGKVIVVAYANYGRTAKGVCR 69
>SB_34737| Best HMM Match : Gal_Lectin (HMM E-Value=1.7e-23)
Length = 100
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 21 LRCPKGKVIVVAYANYGRTAKGVCR 45
>SB_30196| Best HMM Match : Gal_Lectin (HMM E-Value=6.1e-24)
Length = 100
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 21 LRCPKGKVIVVAYANYGRTAKGVCR 45
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFD 418
L V L+ R LR F ++GPV++ ++V+D
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYD 215
>SB_25911| Best HMM Match : Gal_Lectin (HMM E-Value=8.1e-37)
Length = 413
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 187 LRCPKGKVIVVAYANYGRTAKGVCR 211
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 334 LRCPKGKVIVVAYANYGRTAKGVCR 358
>SB_25910| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23)
Length = 216
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 137 LRCPKGKVIVVAYANYGRTAKGVCR 161
>SB_25909| Best HMM Match : Gal_Lectin (HMM E-Value=6.8e-23)
Length = 216
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 137 LRCPKGKVIVVAYANYGRTAKGVCR 161
>SB_21670| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-17)
Length = 237
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 21 LRCPKGKVIVVAYANYGRTAKGVCR 45
>SB_21403| Best HMM Match : Gal_Lectin (HMM E-Value=1.6e-20)
Length = 244
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 165 LRCPKGKVIVVAYANYGRTAKGVCR 189
>SB_21402| Best HMM Match : Gal_Lectin (HMM E-Value=9.2e-24)
Length = 194
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 256 LLTPVGNSIIIGYGQYGKSSPPVCR 330
L P G I++ Y YG+++ VCR
Sbjct: 115 LRCPKGKVIVVAYANYGRTAKGVCR 139
>SB_18612| Best HMM Match : DUF1186 (HMM E-Value=2.4)
Length = 692
Score = 27.9 bits (59), Expect = 9.2
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +2
Query: 362 LREYFSQFGP--VQSARVVFDRSTGLSKGYGFI-EFTSPSAAADATNKQIHTLKVST*VF 532
L + SQ P + S +VF TGL + Y + D + + + K+ + +
Sbjct: 359 LPQVISQVSPRILPSILLVF---TGLKRAYDARGDDEDDEEVEDGEDNEGKSFKIFSSTY 415
Query: 533 NCKIIRYSEF*LVFKMAEALPDYPDSDFSDEDQSPLDSLFNKAADH 670
C + ++ +V + E D + +F+++D +++L KAADH
Sbjct: 416 ECHLQIPNDLHVVTFVEELASD--EDEFNEDDVEYIENLAKKAADH 459
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,533,312
Number of Sequences: 59808
Number of extensions: 415113
Number of successful extensions: 1052
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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