Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20963
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 56 2e-08
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 56 4e-08
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 56 4e-08
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 56 4e-08
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 52 4e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 52 6e-07
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 52 6e-07
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 52 6e-07
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 50 2e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 50 2e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 50 2e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 48 9e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 48 9e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 48 9e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 48 9e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 45 5e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 45 5e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 45 5e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 44 2e-04
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 44 2e-04
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 44 2e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 42 3e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 42 6e-04
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 42 6e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 40 0.002
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 40 0.002
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 40 0.002
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 40 0.002
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.004
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 39 0.004
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 39 0.004
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.006
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 38 0.008
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 38 0.010
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.010
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.010
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.010
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.010
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 37 0.017
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 37 0.017
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.023
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 36 0.023
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 36 0.023
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.040
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.040
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 35 0.070
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 35 0.070
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 35 0.070
Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 32 0.49
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 32 0.49
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 32 0.49
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 32 0.49
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.65
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 31 0.65
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 31 1.1
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 29 4.6
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 29 4.6
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 29 4.6
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 4.6
Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 28 8.0
U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna syn... 28 8.0
AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear recep... 28 8.0
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 8.0
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
++++G L+W LR+YF +FG V V+ D +T ++G+GFI F PS+ N
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 497 QIHTL 511
+ H L
Sbjct: 106 REHEL 110
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/78 (26%), Positives = 44/78 (56%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ ++++G L+ T +++YF +G V+ A ++FD++T +G+GF+ F S A
Sbjct: 132 KTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKV 191
Query: 488 TNKQIHTLKVST*VFNCK 541
+IH +++ + CK
Sbjct: 192 C--EIHFHEINGKMVECK 207
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
++++G L+W LR+YF +FG V V+ D +T ++G+GFI F PS+ N
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 497 QIHTL 511
+ H L
Sbjct: 106 REHEL 110
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/78 (26%), Positives = 44/78 (56%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ ++++G L+ T +++YF +G V+ A ++FD++T +G+GF+ F S A
Sbjct: 132 KTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKV 191
Query: 488 TNKQIHTLKVST*VFNCK 541
+IH +++ + CK
Sbjct: 192 C--EIHFHEINGKMVECK 207
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S + +L++G L+ QL YFSQ+GPV A V+ D +T S+G+GF+ F S +A
Sbjct: 44 SPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSA 103
Query: 479 ADATNKQIHTL 511
A N + H L
Sbjct: 104 ESAMNDRPHKL 114
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S + +L++G L+ QL YFSQ+GPV A V+ D +T S+G+GF+ F S +A
Sbjct: 64 SPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSA 123
Query: 479 ADATNKQIHTL 511
A N + H L
Sbjct: 124 ESAMNDRPHKL 134
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S + +L++G L+ QL YFSQ+GPV A V+ D +T S+G+GF+ F S +A
Sbjct: 65 SPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSA 124
Query: 479 ADATNKQIHTL 511
A N + H L
Sbjct: 125 ESAMNDRPHKL 135
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+YVGN + L YFSQ G V + R+V DR TG +G+ F+EFT +AA A ++
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
+T + LY+ L LRE S++G + S + + D++T KGYGF++F SP AA
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 479 ADATN 493
A A +
Sbjct: 162 AAAVD 166
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
+Y+ ++ W G QL YF ++G +QS + +D TGL +G+ I F S A A ++
Sbjct: 27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQR 86
Query: 500 IHTL 511
H +
Sbjct: 87 PHVI 90
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
++VGN+++ V +R FS+ G V S ++V DR TG KGYGFIEF
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+++VG L + + L EYF QFG ++ A V+ DR+T S+GYGF+ ++A A
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERA 92
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAA 481
T R ++VG+L+ V +++LRE F FG V A+V+ D +T SKGYGF+ + A
Sbjct: 18 TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 77
Query: 482 DA 487
A
Sbjct: 78 RA 79
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+YVGN+A ++ ++R+ F+ FG + R+ +GY F++F + AAA A
Sbjct: 130 VYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKA 178
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAA 481
T R ++VG+L+ V +++LRE F FG V A+V+ D +T SKGYGF+ + A
Sbjct: 28 TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 87
Query: 482 DA 487
A
Sbjct: 88 RA 89
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+YVGN+A ++ ++R+ F+ FG + R+ +GY F++F + AAA A
Sbjct: 140 VYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKA 188
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAA 481
T R ++VG+L+ V +++LRE F FG V A+V+ D +T SKGYGF+ + A
Sbjct: 131 TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 190
Query: 482 DA 487
A
Sbjct: 191 RA 192
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
LYVGNL TV + F+Q G V +V+FD G + Y F+EF+ A+ A
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQA 100
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+YVGN+A ++ ++R+ F+ FG + R+ +GY F++F + AAA A
Sbjct: 243 VYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKA 291
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAA 481
T R ++VG+L+ V +++LRE F FG V A+V+ D +T SKGYGF+ + A
Sbjct: 99 TTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAE 158
Query: 482 DA 487
A
Sbjct: 159 RA 160
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+YVGN+A ++ ++R+ F+ FG + R+ +GY F++F + AAA A
Sbjct: 211 VYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKA 259
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFD 418
LYVGNL TV + F+Q G V +V+FD
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/66 (33%), Positives = 40/66 (60%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+++VG ++ V + L +F+Q+G V A+V +DR+ G S+G+ F+EFT+ A
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 497 QIHTLK 514
+ T+K
Sbjct: 90 REQTIK 95
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +2
Query: 296 ASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSA 475
A + +++VG L + LR +F QFG V FD+ T + + FI F +
Sbjct: 104 AKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEES 163
Query: 476 AADATNKQIHT 508
A A+++ T
Sbjct: 164 ADKASSQTKQT 174
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/66 (33%), Positives = 40/66 (60%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+++VG ++ V + L +F+Q+G V A+V +DR+ G S+G+ F+EFT+ A
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 497 QIHTLK 514
+ T+K
Sbjct: 90 REQTIK 95
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = +2
Query: 296 ASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSA 475
A + +++VG L + LR +F QFG V FD+ T + + FI F +
Sbjct: 104 AKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEES 163
Query: 476 AADATNKQIHT 508
A A+++ T
Sbjct: 164 ADKASSQTKQT 174
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
+ LY+ L LRE S++G + S + + D++T KGYGF++F SP AAA A
Sbjct: 80 STNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAV 139
Query: 491 N 493
+
Sbjct: 140 D 140
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+YVGN+ + ++ YF+ G V + R+V+DR TG +G+ F+EF+ + A A +
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+YVGN + +L +FS G + + R+V DR TG +G+ FIEF +A A +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
+R+YVG++++ + LR F FGP++S + +D +TG K + F+E+ P AA
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAA 156
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
R+YV ++ + L+ F FG + ++ + +G+G++EF + ++ ++A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
+R+YVG++++ + LR F FGP++S + +D +TG K + F+E+ P AA
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAA 156
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
R+YV ++ + L+ F FG + ++ + +G+G++EF + ++ ++A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
+R+YVG++++ + LR F FGP++S + +D +TG K + F+E+ P AA
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAA 156
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
R+YV ++ + L+ F FG + ++ + +G+G++EF + ++ ++A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAA 481
T++ ++VG+L+ V + L+ F++FG V A+V+ D T SKGYGF+ F + A
Sbjct: 131 TSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAE 190
Query: 482 DA 487
+A
Sbjct: 191 NA 192
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
T+R ++VG+L + +LRE F +FG V A+++ D +T KGYGF+ +
Sbjct: 128 TSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +2
Query: 239 GFDRRSSLHLLEIVSL*VMASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFD 418
GF+ R + E + + + L+V NL + L F+Q G V A+++F+
Sbjct: 15 GFNPRVHARIAEREGFQLASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE 74
Query: 419 RSTGLSKGYGFIEFTSPSAA 478
GL+ Y F+EF+ + A
Sbjct: 75 ---GLNDPYAFVEFSDHNQA 91
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFS-QFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
++VGNL + + L +FS Q GPV++ R+V D+ TG KG+ F+ F S+ + A +
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSM 307
Query: 497 Q 499
+
Sbjct: 308 E 308
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 296 ASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARV 409
++ A ++VGN+ T+ + +R FS FG + S R+
Sbjct: 137 SAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ LYV N+ + LR++FS FG + SA+V+ D + G SKG+GF+ F P A A
Sbjct: 341 QGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEATAA 399
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
+T A LY+G+L V L E FS GPV S RV D ++ LS GY ++ F P+ A
Sbjct: 52 ATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADA 111
Query: 479 ADA 487
A
Sbjct: 112 ERA 114
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +2
Query: 296 ASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSA 475
A A +++ NL + ++ + + FS FG + S +V D G SKGYGF+ F + +
Sbjct: 139 ARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHS 197
Query: 476 AADATNK 496
A A K
Sbjct: 198 AQTAIEK 204
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S + ++V N + +L FS+FG + SA V+ D + G KG+GF+ F AA
Sbjct: 233 SGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAA 291
Query: 479 ADATNK 496
A K
Sbjct: 292 GQAVEK 297
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ LYV N+ + LR++FS FG + SA+V+ D + G SKG+GF+ F P A A
Sbjct: 341 QGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEEATAA 399
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
+T A LY+G+L V L E FS GPV S RV D ++ LS GY ++ F P+ A
Sbjct: 52 ATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADA 111
Query: 479 ADA 487
A
Sbjct: 112 ERA 114
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +2
Query: 296 ASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSA 475
A A +++ NL + ++ + + FS FG + S +V D G SKGYGF+ F + +
Sbjct: 139 ARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEHS 197
Query: 476 AADATNK 496
A A K
Sbjct: 198 AQTAIEK 204
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S + ++V N + +L FS+FG + SA V+ D + G KG+GF+ F AA
Sbjct: 233 SGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAA 291
Query: 479 ADATNK 496
A K
Sbjct: 292 GQAVEK 297
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/63 (44%), Positives = 34/63 (53%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S+ A LYVG+L V L E FS GPV S RV D +T LS GY ++ F P+ A
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 479 ADA 487
A
Sbjct: 87 ERA 89
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++ NL + ++ + + FS FG + S +V D G SKGYGF+ F + AA +A
Sbjct: 119 AGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAI 177
Query: 491 NK 496
K
Sbjct: 178 QK 179
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ LYV NL TV L++ F +G + SA+V+ D + G SKG+GF+ F P A A
Sbjct: 315 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSA 373
Query: 488 TNK 496
+
Sbjct: 374 VTE 376
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 293 MASTARA-ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSP 469
+ TA+ +YV N L + F++FG + S V+ G SKG+GF+ F +P
Sbjct: 205 LGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVM--TVEGKSKGFGFVAFANP 262
Query: 470 SAAADA 487
A A
Sbjct: 263 EEAETA 268
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/63 (44%), Positives = 34/63 (53%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S+ A LYVG+L V L E FS GPV S RV D +T LS GY ++ F P+ A
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 479 ADA 487
A
Sbjct: 87 ERA 89
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ LYV NL TV L++ F +G + SA+V+ D + G SKG+GF+ F P A A
Sbjct: 255 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSA 313
Query: 488 TNK 496
+
Sbjct: 314 VTE 316
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 293 MASTARA-ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSP 469
+ TA+ +YV N L + F++FG + S V+ G SKG+GF+ F +P
Sbjct: 145 LGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANP 202
Query: 470 SAAADA 487
A A
Sbjct: 203 EEAETA 208
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++ NL + ++ + + FS FG + S +V D G SKGYGF+ F + AA +A
Sbjct: 56 AGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAI 114
Query: 491 NK 496
K
Sbjct: 115 QK 116
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ LYV NL TV L++ F +G + SA+V+ D + G SKG+GF+ F P A A
Sbjct: 252 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSA 310
Query: 488 TNK 496
+
Sbjct: 311 VTE 313
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 293 MASTARA-ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSP 469
+ TA+ +YV N L + F++FG + S V+ G SKG+GF+ F +P
Sbjct: 142 LGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANP 199
Query: 470 SAAADA 487
A A
Sbjct: 200 EEAETA 205
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/63 (44%), Positives = 34/63 (53%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S+ A LYVG+L V L E FS GPV S RV D +T LS GY ++ F P+ A
Sbjct: 27 SSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADA 86
Query: 479 ADA 487
A
Sbjct: 87 ERA 89
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++ NL + ++ + + FS FG + S +V D G SKGYGF+ F + AA +A
Sbjct: 119 AGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAI 177
Query: 491 NK 496
K
Sbjct: 178 QK 179
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+ LYV NL TV L++ F +G + SA+V+ D + G SKG+GF+ F P A A
Sbjct: 315 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKPEEATSA 373
Query: 488 TNK 496
+
Sbjct: 374 VTE 376
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 293 MASTARA-ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSP 469
+ TA+ +YV N L + F++FG + S V+ G SKG+GF+ F +P
Sbjct: 205 LGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANP 262
Query: 470 SAAADA 487
A A
Sbjct: 263 EEAETA 268
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
RL++ NL + L+ F ++G V +VV D+ TG KG+ +EF P AA A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAA 336
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLS-KGYGFIEFTSPSAAADATN 493
+L V NL + +++ F FG V++ R+ +G+GF++F S A A +
Sbjct: 749 KLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRAFD 808
Query: 494 KQIHT 508
+H+
Sbjct: 809 SLVHS 813
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
L V NL+ + LR+ F +FG + +V+DR +G S+G+GFI F A A +K
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKL 137
Query: 500 IHT 508
+T
Sbjct: 138 CNT 140
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+L++G L+ LRE F++FG ++ V+ D+ G S+G F+ FT+ S A AT +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 497 QIHT 508
H+
Sbjct: 202 MHHS 205
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A L++ +L G L F+ FG + SA+V D+ T LSK +GF+ + + +A +A
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 556
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++VG + R F ++G V S ++ D+ST SKG F+ F A +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 491 NKQIHTLKV 517
+H +KV
Sbjct: 114 G-ALHNIKV 121
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+L++G L+ LRE F++FG ++ V+ D+ G S+G F+ FT+ S A AT +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 497 QIHT 508
H+
Sbjct: 202 MHHS 205
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A L++ +L G L F+ FG + SA+V D+ T LSK +GF+ + + +A +A
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 556
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++VG + R F ++G V S ++ D+ST SKG F+ F A +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 491 NKQIHTLKV 517
+H +KV
Sbjct: 114 G-ALHNIKV 121
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+L++G L+ LRE F++FG ++ V+ D+ G S+G F+ FT+ S A AT +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 497 QIHT 508
H+
Sbjct: 202 MHHS 205
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A L++ +L G L F+ FG + SA+V D+ T LSK +GF+ + + +A +A
Sbjct: 428 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 485
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++VG + R F ++G V S ++ D+ST SKG F+ F A +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 491 NKQIHTLKV 517
+H +KV
Sbjct: 114 G-ALHNIKV 121
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+L++G L+ LRE F++FG ++ V+ D+ G S+G F+ FT+ S A AT +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 497 QIHT 508
H+
Sbjct: 202 MHHS 205
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++VG + R F ++G V S ++ D+ST SKG F+ F A +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 491 NKQIHTLKV 517
+H +KV
Sbjct: 114 G-ALHNIKV 121
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+L++G L+ LRE F++FG ++ V+ D+ G S+G F+ FT+ S A AT +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 497 QIHT 508
H+
Sbjct: 202 MHHS 205
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++VG + R F ++G V S ++ D+ST SKG F+ F A +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 491 NKQIHTLKV 517
+H +KV
Sbjct: 114 G-ALHNIKV 121
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+L++G L+ LRE F++FG ++ V+ D+ G S+G F+ FT+ S A AT +
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 497 QIHT 508
H+
Sbjct: 202 MHHS 205
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A L++ +L G L F+ FG + SA+V D+ T LSK +GF+ + + +A +A
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 556
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++VG + R F ++G V S ++ D+ST SKG F+ F A +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 491 NKQIHTLKV 517
+H +KV
Sbjct: 114 G-ALHNIKV 121
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+++VG L +RE++SQFG + V+ D +T S+G+GF+ F S DA K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF-SGKTEVDAAMK 82
Query: 497 Q 499
Q
Sbjct: 83 Q 83
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S RLYV + L EYF+++G V + ++ D++T +G+GF+ F +
Sbjct: 109 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Query: 479 ADATNKQIH 505
++ H
Sbjct: 169 DQCVLQKSH 177
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+++VG L +RE++SQFG + V+ D +T S+G+GF+ F S DA K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF-SGKTEVDAAMK 82
Query: 497 Q 499
Q
Sbjct: 83 Q 83
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S RLYV + L EYF+++G V + ++ D++T +G+GF+ F +
Sbjct: 109 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Query: 479 ADATNKQIH 505
++ H
Sbjct: 169 DQCVLQKSH 177
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
+++VG L +RE++SQFG + V+ D +T S+G+GF+ F S DA K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF-SGKTEVDAAMK 82
Query: 497 Q 499
Q
Sbjct: 83 Q 83
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S RLYV + L EYF+++G V + ++ D++T +G+GF+ F +
Sbjct: 109 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 168
Query: 479 ADATNKQIH 505
++ H
Sbjct: 169 DQCVLQKSH 177
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
+ + LYV + ++ +L F FG + ++R++ D TGLSKG GF+ F A
Sbjct: 126 KGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEA 182
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A L++ +L G L F+ FG + SA+V D+ T LSK +GF+ + + +A +A
Sbjct: 335 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNA 392
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFI 454
+A +Y+G L++ + + FSQ+G V + ++ D+ TG SKG+ F+
Sbjct: 37 SAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFL 84
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S RLYV + L EYF+++G V + ++ D++T +G+GF+ F +
Sbjct: 71 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 130
Query: 479 ADATNKQIH 505
++ H
Sbjct: 131 DQCVLQKSH 139
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 362 LREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
+RE++SQFG + V+ D +T S+G+GF+ F S DA KQ
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF-SGKTEVDAAMKQ 45
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 299 STARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
S RLYV + L EYF+++G V + ++ D++T +G+GF+ F +
Sbjct: 71 SNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSV 130
Query: 479 ADATNKQIH 505
++ H
Sbjct: 131 DQCVLQKSH 139
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 362 LREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
+RE++SQFG + V+ D +T S+G+GF+ F S DA KQ
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF-SGKTEVDAAMKQ 45
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
A +L+VG + + + LR F QFG + ++ D+ TG+ KG F+ + +A
Sbjct: 28 AIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSA 83
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFT---SPSAAADAT 490
L++ +L G +L + F+ FG + SA+V DR+T SK +GF+ + S AA A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 491 N 493
N
Sbjct: 491 N 491
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/68 (36%), Positives = 34/68 (50%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATN 493
A +YVG L V L E Q GPV S + DR T +G+GF+EF AD
Sbjct: 13 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMG-EEDADYAI 71
Query: 494 KQIHTLKV 517
K ++ +K+
Sbjct: 72 KILNMIKL 79
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/68 (36%), Positives = 34/68 (50%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATN 493
A +YVG L V L E Q GPV S + DR T +G+GF+EF AD
Sbjct: 23 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMG-EEDADYAI 81
Query: 494 KQIHTLKV 517
K ++ +K+
Sbjct: 82 KILNMIKL 89
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
A +L+VG + + + LR F QFG + ++ D+ TG+ KG F+ + +A
Sbjct: 28 AIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSA 83
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFT---SPSAAADAT 490
L++ +L G +L + F+ FG + SA+V DR+T SK +GF+ + S AA A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 491 N 493
N
Sbjct: 491 N 491
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
A +YVGN+ W ++ E+F+ G V + D+ TG K + F+EF
Sbjct: 45 ARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEF 94
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 305 ARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAAD 484
A A +YVGN+ + ++ ++F G V + DR +G KG+ ++EFT +
Sbjct: 75 ADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQN 134
Query: 485 A 487
A
Sbjct: 135 A 135
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAAD 484
R++VG + +LRE+F +F V+ ++V G SKGYGFI F + A +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAEE 121
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAAD 484
R++VG + +LRE+F +F V+ ++V G SKGYGFI F + A +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAEE 122
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +2
Query: 308 RAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
R LYVG V + L F FG V + + D +G +G+GF+EF AA A
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
L + +A R L E+FS G V+ R++ D TG SKG ++EF
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
L + +A R L E+FS G V+ R++ D TG SKG ++EF
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
A +++VG + R F ++G V S ++ D+ST SKG F+ F A +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 491 NKQIHTLKV 517
+H +KV
Sbjct: 114 G-ALHNIKV 121
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKG 442
+L++G L+ LRE F++FG ++ V+ D+ G S+G
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
R++ G+L V L + F ++ Q A+VV + T SKGYGF+ F
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 326 VGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
V NL + +LR+ F + G V + D+ TGL KG+ F+ F S AA A
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARA 233
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
++V N+ + + FS++G +++ + DR TG KGY +E+ + A +A ++
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 500 IHT 508
T
Sbjct: 117 NDT 119
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A ++++G L + Q++E FGP+++ + D S G SKGY F E+ P+ A
Sbjct: 290 ANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQA 347
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQ----FGPVQS-ARVVFDRSTGLSKGYGFIEFTS 466
T ++ RLYVGN+ + + ++F+Q G Q+ + L K + FIEF S
Sbjct: 180 TCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRS 239
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A ++++G L + Q++E FGP+++ + D S G SKGY F E+ P+ A
Sbjct: 290 ANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQA 347
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQ----FGPVQS-ARVVFDRSTGLSKGYGFIEFTS 466
T ++ RLYVGN+ + + ++F+Q G Q+ + L K + FIEF S
Sbjct: 180 TCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRS 239
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A ++++G L + Q++E FGP+++ + D S G SKGY F E+ P+ A
Sbjct: 265 ANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQA 322
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQ----FGPVQS-ARVVFDRSTGLSKGYGFIEFTS 466
T ++ RLYVGN+ + + ++F+Q G Q+ + L K + FIEF S
Sbjct: 155 TCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRS 214
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A ++++G L + Q++E FGP+++ + D S G SKGY F E+ P+ A
Sbjct: 268 ANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQA 325
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 TARAARLYVGNLAWTVGHRQLREYFSQ----FGPVQS-ARVVFDRSTGLSKGYGFIEFTS 466
T ++ RLYVGN+ + + ++F+Q G Q+ + L K + FIEF S
Sbjct: 158 TCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRS 217
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +2
Query: 320 LYVGNL----AWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
LY+GNL A V + L ++F Q+G ++ RV+ + KG FIEFT+ AA A
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAERA 290
Query: 488 TNKQIH 505
+ +
Sbjct: 291 AERSFN 296
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 296 ASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSA 475
+ST RL+V N+ + L F + GPV ++F+ SKG+GF+ +P
Sbjct: 94 SSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDD 151
Query: 476 A 478
A
Sbjct: 152 A 152
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 296 ASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSA 475
+ST RL+V N+ + L F + GPV ++F+ SKG+GF+ +P
Sbjct: 94 SSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDD 151
Query: 476 A 478
A
Sbjct: 152 A 152
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
AAR+Y+G L V + + +F +G + R L G+GF+EF A DA
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQI--------RDVLLKNGFGFVEFDDKRDAEDAV 53
Query: 491 N 493
+
Sbjct: 54 H 54
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
AAR+Y+G L V + + +F +G + R L G+GF+EF A DA
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQI--------RDVLLKNGFGFVEFDDKRDAEDAV 53
Query: 491 N 493
+
Sbjct: 54 H 54
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 36.3 bits (80), Expect = 0.023
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADAT 490
AAR+Y+G L V + + +F +G + R L G+GF+EF A DA
Sbjct: 2 AARIYIGRLTSRVSEKDIEHFFRGYGQI--------RDVLLKNGFGFVEFDDKRDAEDAV 53
Query: 491 N 493
+
Sbjct: 54 H 54
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
RL+V N+ + L+ F +FG V ++F+ SKG+GF+ P A+ +
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQ-DAERARQ 210
Query: 497 QIH 505
++H
Sbjct: 211 ELH 213
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
RL+V N+ + L+ F +FG V ++F+ SKG+GF+ P A+ +
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQ-DAERARQ 210
Query: 497 QIH 505
++H
Sbjct: 211 ELH 213
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
L+V L L FS+FG + + +V DR +G S Y FIEF + + A K
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 500 IHTL 511
+ L
Sbjct: 303 DNVL 306
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
L+V L L FS+FG + + +V DR +G S Y FIEF + + A K
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 500 IHTL 511
+ L
Sbjct: 303 DNVL 306
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQ 499
L+V L L FS+FG + + +V DR +G S Y FIEF + + A K
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 500 IHTL 511
+ L
Sbjct: 234 DNVL 237
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAAD 484
+++ NL++ ++E S+FG + A + + +G SKG F+ F++P A++
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASN 319
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.040
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
+YVG++ V L F + G + R++ D +G S+GY F+ + + AA A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAA 257
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 356 RQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
++L YF QFG V RV +R TG KG+ ++ F + + A
Sbjct: 46 KELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVA 86
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
L + NL++ LR F ++G + + D+ + SKG+GF+ F A A ++
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNK 496
L + NL++ LR F ++G + + D+ + SKG+GF+ F A A ++
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
>Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical
protein T12D8.3 protein.
Length = 274
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +2
Query: 596 DYPDSDFSDEDQSPLDSL----FNKAADHLRKITNKLDNGQLLELYGLFKQGTE 745
D+P ++ ++++ P+D+L F+ A L K+D +L+ YGL+KQ E
Sbjct: 12 DHPKNE--NQEEEPIDTLLEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVE 63
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 650 FNKAADHLRKITNKLDNGQLLELYGLFKQGT 742
F KA +L+ + + DN L+LYGLFKQ T
Sbjct: 29 FEKAQKNLKTLKEEPDNDVKLQLYGLFKQAT 59
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
LYVGNL++ Q+ E F + G V+ + DR G+ F+E+
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEY 85
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A +++GN+ + ++ E+F G + + D+ T K + +IEF S+ +A
Sbjct: 54 AKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
++YVGNL V +++ + F ++G ++ D +G + F+EF A DA
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIK----YVDIKSGRGPAFAFVEFEDHRDAEDA 62
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 317 RLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
++YVGNL V +++ + F ++G ++ D +G + F+EF A DA
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIK----YVDIKSGRGPAFAFVEFEDHRDAEDA 62
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFD 418
LYVGNL TV + F+Q G V +V+FD
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 650 FNKAADHLRKITNKLDNGQLLELYGLFKQGT 742
F+ AA ++ + N +LL+LY LFKQGT
Sbjct: 5 FDDAAATVKTLKTSPSNDELLKLYALFKQGT 35
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 311 AARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A +++GN+ + ++ E+F G + + D+ T K + +IEF S+ +A
Sbjct: 60 AKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 348 TVQARLPTYRRAALAVLAITYNDTISNRCKELRRSKPCSQHQSFH 214
T+ RLP +RR + + Y+ + ++ KE+ RS +Q +SF+
Sbjct: 289 TIVTRLPRFRRRYGNITVVPYDPDVRSK-KEVLRSLKAAQSESFN 332
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A++YVG L ++L E F +FG ++ V G+ F+E+ A DA
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDA 55
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A++YVG L ++L E F +FG ++ V G+ F+E+ A DA
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDA 55
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 314 ARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADA 487
A++YVG L ++L E F +FG ++ V G+ F+E+ A DA
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDA 55
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 320 LYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEF 460
LY+ NL + + ++ E F +FG V+ RV +T ++G F+ +
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRV---GNTAETRGTAFVVY 64
>Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical
protein T23H4.2 protein.
Length = 373
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 311 LLPYWP*PIMILFPTGVRSFADQSPVVNTR-AFTERVQVQKCTFKS 177
L+ Y ++ F VR DQSPV N R AF +Q ++CT K+
Sbjct: 244 LIEYVALKAILFFNPVVREINDQSPVENARYAFLRSLQ-RRCTDKA 288
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 374 FSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAA 478
F + GPV ++F+ SKG+GF+ +P A
Sbjct: 2 FEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDA 34
>U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna
synthetase protein 2 protein.
Length = 968
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 620 DEDQSPLDSLFNKAADHLRKITNKLDNG 703
DED+ +D + ADH+R +T L +G
Sbjct: 285 DEDKDGVDMAYRVVADHVRTLTIALSDG 312
>AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear receptor
NHR-69 protein.
Length = 373
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -3
Query: 311 LLPYWP*PIMILFPTGVRSFADQSPVVNTR-AFTERVQVQKCTFKS 177
L+ Y ++ F VR DQSPV N R AF +Q ++CT K+
Sbjct: 244 LIEYVALKAILFFNPVVREINDQSPVENARYAFLRSLQ-RRCTDKA 288
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = +2
Query: 32 HLIYYAMSDGRPVSGQLKKFVFRARSSTNG------DTRGTQHRLVYRSSTKEVG 178
H I YA+S P G K ++ S TNG + G Q + +Y ++K G
Sbjct: 275 HGIVYAVSSINPSGGTQSKAIYNLTSRTNGIFCSTDPSGGNQSKTIYNLTSKTNG 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,040,456
Number of Sequences: 27780
Number of extensions: 318631
Number of successful extensions: 972
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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