BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20960 (550 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;... 101 1e-20 UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F, puta... 95 7e-19 UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotei... 95 7e-19 UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf prot... 95 1e-18 UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20... 95 1e-18 UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotei... 89 5e-17 UniRef50_Q010Y9 Cluster: Ypt/Rab GTPase activating protein; n=13... 86 6e-16 UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F, puta... 70 4e-11 UniRef50_A6S0C4 Cluster: Predicted protein; n=2; Ascomycota|Rep:... 67 3e-10 UniRef50_Q6BPY4 Cluster: Debaryomyces hansenii chromosome E of s... 66 4e-10 UniRef50_A7EAP1 Cluster: Putative uncharacterized protein; n=2; ... 65 9e-10 UniRef50_Q6CPH1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 60 3e-08 UniRef50_P54999 Cluster: Small nuclear ribonucleoprotein F; n=11... 60 4e-08 UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm... 58 1e-07 UniRef50_A4HNB4 Cluster: Sm-f snRNP core complex protein, putati... 54 3e-06 UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm... 53 5e-06 UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;... 52 9e-06 UniRef50_Q7RMQ6 Cluster: Putative uncharacterized protein PY0212... 52 9e-06 UniRef50_A2EH12 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 49 6e-05 UniRef50_Q758M9 Cluster: AEL274Cp; n=1; Eremothecium gossypii|Re... 49 6e-05 UniRef50_A1CE19 Cluster: LSM domain protein; n=3; Trichocomaceae... 49 6e-05 UniRef50_Q4N728 Cluster: U6 small nuclear ribonucleoprotein, put... 48 1e-04 UniRef50_Q8SS46 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN F; n=1;... 48 1e-04 UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica... 48 2e-04 UniRef50_Q3LWJ8 Cluster: MRNA splicing factor snRNP-F; n=1; Bige... 47 3e-04 UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm... 47 3e-04 UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F, puta... 46 8e-04 UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog... 45 0.001 UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm... 45 0.001 UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4; ... 45 0.001 UniRef50_Q976F2 Cluster: 90aa long hypothetical small nuclear ri... 45 0.001 UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep... 44 0.003 UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 44 0.003 UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1; T... 42 0.012 UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu... 42 0.012 UniRef50_Q00UL7 Cluster: Putative Sm protein F; n=1; Ostreococcu... 41 0.016 UniRef50_A3DP35 Cluster: Like-Sm ribonucleoprotein, core; n=1; S... 41 0.016 UniRef50_UPI00015BACE3 Cluster: Like-Sm ribonucleoprotein, core;... 41 0.022 UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm... 40 0.029 UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2; T... 40 0.029 UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep: A... 40 0.050 UniRef50_Q06406 Cluster: U6 snRNA-associated Sm-like protein LSm... 40 0.050 UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11; E... 39 0.066 UniRef50_Q54KX4 Cluster: LSM (Like-Sm) domain-containing protein... 38 0.15 UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M... 38 0.15 UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A... 38 0.20 UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2; ... 37 0.35 UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;... 37 0.35 UniRef50_Q8ZVU2 Cluster: Small nuclear ribonucleoprotein homolog... 36 0.82 UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog... 35 1.1 UniRef50_A1ZD45 Cluster: Secreted enzyme, contains two amidohydr... 35 1.4 UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1; ... 34 1.9 UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces cere... 34 2.5 UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 34 2.5 UniRef50_P40070 Cluster: U6 snRNA-associated Sm-like protein LSm... 33 3.3 UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole gen... 33 4.4 UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4 UniRef50_Q9LGE6 Cluster: Probable U6 snRNA-associated Sm-like pr... 33 4.4 UniRef50_UPI000156133C Cluster: PREDICTED: similar to LSM4 homol... 33 5.8 UniRef50_Q4UBR6 Cluster: U6 snrna-associated sm-like protein lsm... 33 5.8 UniRef50_Q4MZK0 Cluster: U6 snRNA-associated protein, putative; ... 33 5.8 UniRef50_Q1E7Q6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8 UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 33 5.8 UniRef50_Q9QXA5 Cluster: U6 snRNA-associated Sm-like protein LSm... 33 5.8 UniRef50_Q9Y4Z0 Cluster: U6 snRNA-associated Sm-like protein LSm... 33 5.8 >UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7; Fungi/Metazoa group|Rep: Small nuclear ribonucleoprotein F - Drosophila melanogaster (Fruit fly) Length = 88 Score = 101 bits (241), Expect = 1e-20 Identities = 44/55 (80%), Positives = 49/55 (89%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 INPKPFLN LTGK VLVKLKWG EYKG LVS DGYMN+QLANTEE+++G+ TGNL Sbjct: 7 INPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNL 61 Score = 34.7 bits (76), Expect = 1.4 Identities = 13/17 (76%), Positives = 16/17 (94%) Frame = +3 Query: 255 GEVLIRCNNVLYVRGAD 305 GEVLIRCNNVLY++G + Sbjct: 62 GEVLIRCNNVLYIKGME 78 >UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F, putative, expressed; n=5; Oryza sativa|Rep: Small nuclear ribonucleoprotein F, putative, expressed - Oryza sativa subsp. japonica (Rice) Length = 86 Score = 95.5 bits (227), Expect = 7e-19 Identities = 42/55 (76%), Positives = 47/55 (85%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 +NPKPFLN+LTGK V+VKLKWG EYKG LVS D YMNLQLANTEE +DG +GNL Sbjct: 6 VNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60 Score = 34.3 bits (75), Expect = 1.9 Identities = 13/15 (86%), Positives = 15/15 (100%) Frame = +3 Query: 255 GEVLIRCNNVLYVRG 299 GE+LIRCNNVLY+RG Sbjct: 61 GEILIRCNNVLYLRG 75 >UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotein F; n=7; Magnoliophyta|Rep: Probable small nuclear ribonucleoprotein F - Arabidopsis thaliana (Mouse-ear cress) Length = 88 Score = 95.5 bits (227), Expect = 7e-19 Identities = 41/55 (74%), Positives = 46/55 (83%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 +NPKPFLN+LTGK+V+VKLKWG EYKG L S D YMNLQL NTEE +DG TGNL Sbjct: 6 VNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL 60 Score = 35.5 bits (78), Expect = 0.82 Identities = 14/15 (93%), Positives = 15/15 (100%) Frame = +3 Query: 255 GEVLIRCNNVLYVRG 299 GE+LIRCNNVLYVRG Sbjct: 61 GEILIRCNNVLYVRG 75 >UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf protein; n=1; Mus musculus|Rep: PREDICTED: similar to Snrpf protein - Mus musculus Length = 209 Score = 95.1 bits (226), Expect = 1e-18 Identities = 41/55 (74%), Positives = 47/55 (85%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 +NPKPFLN LTGK V+VKLKWG EYKG LVS DGYMN+QLANTEE +DG +G+L Sbjct: 128 LNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHL 182 Score = 36.3 bits (80), Expect = 0.47 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +3 Query: 255 GEVLIRCNNVLYVRGAD 305 GEVLIRCNNVLY+RG + Sbjct: 183 GEVLIRCNNVLYIRGVE 199 >UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20; Euteleostomi|Rep: Small nuclear ribonucleoprotein F - Homo sapiens (Human) Length = 86 Score = 95.1 bits (226), Expect = 1e-18 Identities = 41/55 (74%), Positives = 47/55 (85%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 +NPKPFLN LTGK V+VKLKWG EYKG LVS DGYMN+QLANTEE +DG +G+L Sbjct: 5 LNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHL 59 Score = 36.3 bits (80), Expect = 0.47 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = +3 Query: 255 GEVLIRCNNVLYVRGAD 305 GEVLIRCNNVLY+RG + Sbjct: 60 GEVLIRCNNVLYIRGVE 76 >UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotein F; n=13; Eukaryota|Rep: Probable small nuclear ribonucleoprotein F - Caenorhabditis elegans Length = 85 Score = 89.4 bits (212), Expect = 5e-17 Identities = 39/55 (70%), Positives = 45/55 (81%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 +NPKPFLNSLTGK V+ KLKWG EYKG+LV+ D YMNLQLA+ EE +DG GNL Sbjct: 7 VNPKPFLNSLTGKFVVCKLKWGMEYKGVLVAVDSYMNLQLAHAEEYIDGNSQGNL 61 Score = 35.1 bits (77), Expect = 1.1 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +3 Query: 255 GEVLIRCNNVLYVRGAD 305 GE+LIRCNNVLYV G D Sbjct: 62 GEILIRCNNVLYVGGVD 78 >UniRef50_Q010Y9 Cluster: Ypt/Rab GTPase activating protein; n=13; Eukaryota|Rep: Ypt/Rab GTPase activating protein - Ostreococcus tauri Length = 836 Score = 85.8 bits (203), Expect = 6e-16 Identities = 39/55 (70%), Positives = 44/55 (80%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 INPKPFL +LTGK V V+LKWG EY+G LVSTD YMNLQLA+TEE +DG G L Sbjct: 762 INPKPFLAALTGKRVAVRLKWGMEYRGFLVSTDAYMNLQLASTEEYIDGELQGAL 816 Score = 34.7 bits (76), Expect = 1.4 Identities = 13/17 (76%), Positives = 16/17 (94%) Frame = +3 Query: 255 GEVLIRCNNVLYVRGAD 305 GEVLIRCNNV+Y+RG + Sbjct: 817 GEVLIRCNNVMYLRGVE 833 >UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F, putative; n=1; Babesia bovis|Rep: Small nuclear ribonucleoprotein F, putative - Babesia bovis Length = 94 Score = 69.7 bits (163), Expect = 4e-11 Identities = 31/55 (56%), Positives = 37/55 (67%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 +NPKPFL L G++V V LKWG EYKG L S D YMN++L N EE +G G L Sbjct: 22 LNPKPFLAKLVGQNVFVTLKWGMEYKGFLKSFDSYMNIELENAEEWENGVMKGTL 76 >UniRef50_A6S0C4 Cluster: Predicted protein; n=2; Ascomycota|Rep: Predicted protein - Botryotinia fuckeliana B05.10 Length = 91 Score = 66.9 bits (156), Expect = 3e-10 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGH--EYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 INP+PFL +L + V+++LKWG EYKG LVS D YMN+QL+ EE +D T L Sbjct: 6 INPRPFLQNLVNEEVIIRLKWGGQTEYKGKLVSIDSYMNIQLSGAEEWIDSEMTSTL 62 >UniRef50_Q6BPY4 Cluster: Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii; n=1; Debaryomyces hansenii|Rep: Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) Length = 101 Score = 66.5 bits (155), Expect = 4e-10 Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 1/48 (2%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELV 231 INPKPFL +L GK V+V+LKW EYKG L+S D YMNLQL T E++ Sbjct: 7 INPKPFLKTLIGKQVIVRLKWNKTEYKGTLISIDNYMNLQLDKTSEVI 54 >UniRef50_A7EAP1 Cluster: Putative uncharacterized protein; n=2; Sclerotiniaceae|Rep: Putative uncharacterized protein - Sclerotinia sclerotiorum 1980 Length = 223 Score = 65.3 bits (152), Expect = 9e-10 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGH--EYKGLLVSTDGYMNLQLANTEELVDGTCT 246 INP+PFL +L + V+++LKWG EYKG LVS D YMN+QL+ EE +D T Sbjct: 151 INPRPFLQNLVNEEVIIRLKWGGQTEYKGKLVSIDSYMNIQLSGAEEWIDSEMT 204 >UniRef50_Q6CPH1 Cluster: Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y- 1140 of Kluyveromyces lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y- 1140 of Kluyveromyces lactis - Kluyveromyces lactis (Yeast) (Candida sphaerica) Length = 112 Score = 60.1 bits (139), Expect = 3e-08 Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 INPKPFL+ L K VLV LK+ +YKG LVS D Y NLQL + EE+++ +G + Sbjct: 9 INPKPFLHQLIDKDVLVTLKFNKIQYKGRLVSVDTYFNLQLTDAEEIINDVSSGKV 64 >UniRef50_P54999 Cluster: Small nuclear ribonucleoprotein F; n=11; Eukaryota|Rep: Small nuclear ribonucleoprotein F - Saccharomyces cerevisiae (Baker's yeast) Length = 86 Score = 59.7 bits (138), Expect = 4e-08 Identities = 31/56 (55%), Positives = 34/56 (60%), Gaps = 1/56 (1%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 +NPKPFL L V VKLK+ EY+G LVSTD Y NLQL EE V G G L Sbjct: 13 VNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTL 68 >UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm6; n=33; Eukaryota|Rep: U6 snRNA-associated Sm-like protein LSm6 - Schizosaccharomyces pombe (Fission yeast) Length = 75 Score = 58.4 bits (135), Expect = 1e-07 Identities = 27/51 (52%), Positives = 34/51 (66%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCT 246 +P FLN + GK VL++L G +YKG+L DGYMNL L TEE V+G T Sbjct: 4 SPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKT 54 >UniRef50_A4HNB4 Cluster: Sm-f snRNP core complex protein, putative; n=5; Trypanosomatidae|Rep: Sm-f snRNP core complex protein, putative - Leishmania braziliensis Length = 77 Score = 53.6 bits (123), Expect = 3e-06 Identities = 26/43 (60%), Positives = 30/43 (69%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225 P FL+SL GK VLVK KWG Y+G LVS D +MNLQL + E Sbjct: 6 PGAFLHSLVGKKVLVKSKWGPVYEGNLVSCDTFMNLQLRDAVE 48 >UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm6; n=22; Eukaryota|Rep: U6 snRNA-associated Sm-like protein LSm6 - Homo sapiens (Human) Length = 80 Score = 52.8 bits (121), Expect = 5e-06 Identities = 23/47 (48%), Positives = 31/47 (65%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 P FL + G+ V+VKL G +Y+G+L DGYMN+ L TEE V+G Sbjct: 8 PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNG 54 >UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1; Guillardia theta|Rep: Small nuclear ribonucleoprotein F - Guillardia theta (Cryptomonas phi) Length = 73 Score = 52.0 bits (119), Expect = 9e-06 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELV 231 +NPK LN+ K+V VKLKWG Y G+ + +D YMN+ L + E++ Sbjct: 1 MNPKNILNNNYNKNVFVKLKWGSSYTGIFIGSDNYMNIILDSCSEVI 47 >UniRef50_Q7RMQ6 Cluster: Putative uncharacterized protein PY02122; n=1; Plasmodium yoelii yoelii|Rep: Putative uncharacterized protein PY02122 - Plasmodium yoelii yoelii Length = 81 Score = 52.0 bits (119), Expect = 9e-06 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGL 174 +NPKPFLNSL G V++KLKWG EYKG+ Sbjct: 52 LNPKPFLNSLVGNRVIIKLKWGMEYKGI 79 >UniRef50_A2EH12 Cluster: Sm protein; n=1; Trichomonas vaginalis G3|Rep: Sm protein - Trichomonas vaginalis G3 Length = 98 Score = 49.2 bits (112), Expect = 6e-05 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELVDGTCTG 249 P+ F+ SL K +++KLKW + EY G L+S D MN+ L+ T E V G G Sbjct: 9 PQKFMESLLNKQIVIKLKWENIEYVGTLISFDERMNIHLSETSEYVGGKTEG 60 >UniRef50_Q758M9 Cluster: AEL274Cp; n=1; Eremothecium gossypii|Rep: AEL274Cp - Ashbya gossypii (Yeast) (Eremothecium gossypii) Length = 86 Score = 49.2 bits (112), Expect = 6e-05 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELVDGTCTG 249 NPKPFL L + ++V LK+ + Y+G L+STD Y N++L EE + G Sbjct: 8 NPKPFLRQLVDQYIVVTLKFNNTRYRGKLMSTDNYFNIRLTEAEEFIGDVSKG 60 >UniRef50_A1CE19 Cluster: LSM domain protein; n=3; Trichocomaceae|Rep: LSM domain protein - Aspergillus clavatus Length = 108 Score = 49.2 bits (112), Expect = 6e-05 Identities = 23/48 (47%), Positives = 30/48 (62%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 +P FL+ + G V VKL G YKG L S DGYMN+ L ++E +DG Sbjct: 10 DPSAFLSEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEQSKEFMDG 57 >UniRef50_Q4N728 Cluster: U6 small nuclear ribonucleoprotein, putative; n=3; Aconoidasida|Rep: U6 small nuclear ribonucleoprotein, putative - Theileria parva Length = 77 Score = 48.4 bits (110), Expect = 1e-04 Identities = 23/47 (48%), Positives = 30/47 (63%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 P ++ S+T K VLVKL G ++KG L S D MNL + NT E +DG Sbjct: 6 PSAYITSITRKPVLVKLNNGSDFKGTLASLDERMNLAMENTCEFLDG 52 >UniRef50_Q8SS46 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN F; n=1; Encephalitozoon cuniculi|Rep: SMALL NUCLEAR RIBONUCLEOPROTEIN F - Encephalitozoon cuniculi Length = 81 Score = 48.0 bits (109), Expect = 1e-04 Identities = 21/44 (47%), Positives = 27/44 (61%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225 NPK FL + +SV V LKWG Y+G LV++D Y N+ L E Sbjct: 13 NPKQFLQRMKNRSVRVALKWGQVYEGTLVASDNYFNILLDECTE 56 >UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6 Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) Length = 84 Score = 47.6 bits (108), Expect = 2e-04 Identities = 24/47 (51%), Positives = 29/47 (61%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 P FL+ + G SV V+L G EY G L S DGYMN+ L T+E V G Sbjct: 17 PSVFLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGG 63 >UniRef50_Q3LWJ8 Cluster: MRNA splicing factor snRNP-F; n=1; Bigelowiella natans|Rep: MRNA splicing factor snRNP-F - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 78 Score = 47.2 bits (107), Expect = 3e-04 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVK-LKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTG 249 NPKPFL +L G+ + + + + + G+LVS D +MN+Q+ NT E + G G Sbjct: 6 NPKPFLKNLVGEKITIYVILKDYSFNGILVSFDSWMNIQMFNTNESIKGMNIG 58 >UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm6; n=2; Pezizomycotina|Rep: U6 snRNA-associated Sm-like protein LSm6 - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea) Length = 83 Score = 46.8 bits (106), Expect = 3e-04 Identities = 24/48 (50%), Positives = 27/48 (56%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 +P FL + G V VKL G YKG L S DGYMN+ L EE V G Sbjct: 13 DPTSFLGEIIGNMVTVKLNSGVIYKGELQSVDGYMNIALEKAEEWVAG 60 >UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F, putative; n=1; Babesia bovis|Rep: Small nuclear ribonucleoprotein F, putative - Babesia bovis Length = 83 Score = 45.6 bits (103), Expect = 8e-04 Identities = 21/47 (44%), Positives = 30/47 (63%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 P ++ ++T K V+VKL G ++GLL S D MNL + NT+E DG Sbjct: 6 PSSYIANITRKPVIVKLNNGTRFRGLLSSLDDRMNLAMENTKEYCDG 52 >UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog; n=5; Thermoproteaceae|Rep: Small nuclear ribonucleoprotein homolog - Pyrobaculum aerophilum Length = 80 Score = 45.2 bits (102), Expect = 0.001 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = +1 Query: 109 LNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 L GK VLVKL+ HE +G+L S D ++NL L + EE++DG Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDG 58 >UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm6, putative; n=1; Filobasidiella neoformans|Rep: U6 snRNA-associated sm-like protein lsm6, putative - Cryptococcus neoformans (Filobasidiella neoformans) Length = 88 Score = 44.8 bits (101), Expect = 0.001 Identities = 20/44 (45%), Positives = 27/44 (61%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225 +P FL ++ GK V V++ G +Y GLL DGYMN+ L EE Sbjct: 16 SPSEFLRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEE 59 >UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4; Pezizomycotina|Rep: Putative uncharacterized protein - Sclerotinia sclerotiorum 1980 Length = 95 Score = 44.8 bits (101), Expect = 0.001 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 +P FL+ + G V+VKL +KG L S DGYMN+ L EE V G Sbjct: 13 DPSSFLSDIIGSRVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHG 60 >UniRef50_Q976F2 Cluster: 90aa long hypothetical small nuclear ribonucleoprotein; n=2; Thermoprotei|Rep: 90aa long hypothetical small nuclear ribonucleoprotein - Sulfolobus tokodaii Length = 90 Score = 44.8 bits (101), Expect = 0.001 Identities = 25/49 (51%), Positives = 29/49 (59%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGT 240 NP L + T K VLVKLK G EY G L +DG MNL L + E +GT Sbjct: 12 NPLKSLKTATNKIVLVKLKDGSEYVGRLEQSDGTMNLVLRDCIETREGT 60 >UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep: Sm-like protein - Sulfolobus acidocaldarius Length = 87 Score = 43.6 bits (98), Expect = 0.003 Identities = 24/49 (48%), Positives = 28/49 (57%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGT 240 NP L + K VLVKLK G EY G L +DG MNL L + E +GT Sbjct: 7 NPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGT 55 >UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Thermoplasmatales|Rep: Putative snRNP Sm-like protein - Thermoplasma acidophilum Length = 83 Score = 43.6 bits (98), Expect = 0.003 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTG 249 + P L S ++VL+ +K EY G+L D YMN+ L N E+++G G Sbjct: 8 VKPMDVLKSALSRNVLIDVKGNREYSGILEGYDVYMNIVLQNASEIINGENKG 60 >UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1; Thermofilum pendens Hrk 5|Rep: Like-Sm ribonucleoprotein, core - Thermofilum pendens (strain Hrk 5) Length = 100 Score = 41.5 bits (93), Expect = 0.012 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVD 234 + P L + +GK V VKLK G EY G L TD MNL L + +EL + Sbjct: 1 MQPIEHLRNQSGKGVFVKLKDGSEYMGKLRMTDAAMNLVLDDAKELTE 48 >UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Euryarchaeota|Rep: Putative snRNP Sm-like protein - Methanobacterium thermoautotrophicum Length = 81 Score = 41.5 bits (93), Expect = 0.012 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255 P L + V++KLK E++G+L S D +MNL L + EEL DG T L Sbjct: 14 PLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRL 66 >UniRef50_Q00UL7 Cluster: Putative Sm protein F; n=1; Ostreococcus tauri|Rep: Putative Sm protein F - Ostreococcus tauri Length = 173 Score = 41.1 bits (92), Expect = 0.016 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 8/53 (15%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYK--------GLLVSTDGYMNLQLANTEE 225 ++P FL ++ GK+VLV+L G +Y+ G+L DGYMN+ + TE+ Sbjct: 53 VSPSDFLRAIEGKTVLVRLNSGADYRGARSRRSIGVLACLDGYMNIAMEQTED 105 >UniRef50_A3DP35 Cluster: Like-Sm ribonucleoprotein, core; n=1; Staphylothermus marinus F1|Rep: Like-Sm ribonucleoprotein, core - Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) Length = 91 Score = 41.1 bits (92), Expect = 0.016 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVD 234 P +L S + VLVK+K GHEY G L D MN+ L+N +E D Sbjct: 11 PLKYLKSAVNQIVLVKIKDGHEYIGTLNMVDHTMNVVLSNCQEYGD 56 >UniRef50_UPI00015BACE3 Cluster: Like-Sm ribonucleoprotein, core; n=1; Ignicoccus hospitalis KIN4/I|Rep: Like-Sm ribonucleoprotein, core - Ignicoccus hospitalis KIN4/I Length = 91 Score = 40.7 bits (91), Expect = 0.022 Identities = 22/45 (48%), Positives = 27/45 (60%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEEL 228 NP +L + VLV+LK G+EY G LV TD MNL L + EL Sbjct: 14 NPLKYLRAAVDNVVLVRLKDGNEYVGKLVFTDNTMNLILDDCTEL 58 >UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm; n=1; Aeropyrum pernix|Rep: Putative small nucleolar RNP protein Sm - Aeropyrum pernix Length = 94 Score = 40.3 bits (90), Expect = 0.029 Identities = 21/48 (43%), Positives = 27/48 (56%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVD 234 +NP +L + VKLK G EY G LV+TD MNL L + E+ D Sbjct: 10 VNPFKYLKEHLNSQIYVKLKDGSEYVGKLVATDTTMNLILDDAIEVAD 57 >UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2; Thermoprotei|Rep: Small nuclear ribonucleoprotein - Cenarchaeum symbiosum Length = 106 Score = 40.3 bits (90), Expect = 0.029 Identities = 21/52 (40%), Positives = 27/52 (51%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGN 252 P L T K+V V+LK EYKG + + D YMNL + + EE D N Sbjct: 35 PLTALQKSTKKAVTVRLKNETEYKGKMENVDSYMNLIMTDAEEFHDSKVVAN 86 >UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep: ACR204Cp - Ashbya gossypii (Yeast) (Eremothecium gossypii) Length = 85 Score = 39.5 bits (88), Expect = 0.050 Identities = 19/40 (47%), Positives = 26/40 (65%) Frame = +1 Query: 106 FLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225 FL+++ GK V VKL G Y+G L S DG+MN+ L + E Sbjct: 16 FLSNIIGKPVNVKLHSGMLYQGTLESIDGFMNVALVDASE 55 >UniRef50_Q06406 Cluster: U6 snRNA-associated Sm-like protein LSm6; n=4; Saccharomycetaceae|Rep: U6 snRNA-associated Sm-like protein LSm6 - Saccharomyces cerevisiae (Baker's yeast) Length = 123 Score = 39.5 bits (88), Expect = 0.050 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = +1 Query: 106 FLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNLVKF 264 FL+ + GK+V VKL G Y G L S DG+MN+ L++ E + L KF Sbjct: 52 FLSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHYESNNNKLLNKF 104 >UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11; Euryarchaeota|Rep: Putative snRNP Sm-like protein - Pyrococcus furiosus Length = 76 Score = 39.1 bits (87), Expect = 0.066 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 P ++ K VLV LK G E++G L+ D ++N+ LAN E L DG Sbjct: 5 PLDVIHKSLDKDVLVILKKGFEFRGKLIGYDIHLNVVLANAELLQDG 51 >UniRef50_Q54KX4 Cluster: LSM (Like-Sm) domain-containing protein; n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm) domain-containing protein - Dictyostelium discoideum AX4 Length = 177 Score = 37.9 bits (84), Expect = 0.15 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216 P L + G ++V+LK G Y GLLV+ D +MN+ L N Sbjct: 3 PLSLLRTGQGHQIMVELKNGETYNGLLVNCDNWMNINLKN 42 >UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core - Methanospirillum hungatei (strain JF-1 / DSM 864) Length = 80 Score = 37.9 bits (84), Expect = 0.15 Identities = 19/40 (47%), Positives = 24/40 (60%) Frame = +1 Query: 118 LTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 L + VL+ LK G E KG+L D +MNL L EE+V G Sbjct: 18 LNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKAEEIVQG 57 >UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; Archaea|Rep: Putative snRNP Sm-like protein - Archaeoglobus fulgidus Length = 77 Score = 37.5 bits (83), Expect = 0.20 Identities = 19/47 (40%), Positives = 27/47 (57%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237 P LN V+V+LK G E++G L D +MNL L + EE+ +G Sbjct: 5 PLDVLNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEEIQNG 51 >UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2; Cryptosporidium|Rep: Putative uncharacterized protein - Cryptosporidium parvum Iowa II Length = 67 Score = 36.7 bits (81), Expect = 0.35 Identities = 18/33 (54%), Positives = 21/33 (63%) Frame = +1 Query: 163 YKGLLVSTDGYMNLQLANTEELVDGTCTGNLVK 261 YKG LVS D YMN+ L + EE +D T G L K Sbjct: 3 YKGTLVSFDEYMNILLNDCEEWIDNTKKGTLGK 35 >UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1; Encephalitozoon cuniculi|Rep: SMALL NUCLEAR RIBONUCLEOPROTEIN G - Encephalitozoon cuniculi Length = 78 Score = 36.7 bits (81), Expect = 0.35 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 103 PFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225 P L SL K ++V++ GH KGLL D +MN+ L+ E Sbjct: 7 PNLASLLHKRIVVRIGGGHTLKGLLTGYDAFMNIVLSEVTE 47 >UniRef50_Q8ZVU2 Cluster: Small nuclear ribonucleoprotein homolog; n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein homolog - Pyrobaculum aerophilum Length = 144 Score = 35.5 bits (78), Expect = 0.82 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +1 Query: 109 LNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216 LN+L G+ V V L G YKG+L + D +N+ LAN Sbjct: 16 LNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLAN 51 >UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog; n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein homolog - Pyrobaculum aerophilum Length = 85 Score = 35.1 bits (77), Expect = 1.1 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +1 Query: 94 NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEEL 228 +P L + K ++ +LK G KG+L + DG MNL L + EL Sbjct: 11 SPIKVLTKMLNKEIIARLKGGVAVKGVLTAYDGCMNLVLNDAAEL 55 >UniRef50_A1ZD45 Cluster: Secreted enzyme, contains two amidohydrolase related domains; n=1; Microscilla marina ATCC 23134|Rep: Secreted enzyme, contains two amidohydrolase related domains - Microscilla marina ATCC 23134 Length = 1022 Score = 34.7 bits (76), Expect = 1.4 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +1 Query: 112 NSLTGKSVLVKLKWGHEYKGLLV-STDGYMNLQL 210 N + G+S L+KLKWG + LL+ TDGY+ L Sbjct: 682 NPVGGQSALIKLKWGEAPEKLLIPGTDGYIKFAL 715 >UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1; Phaeosphaeria nodorum|Rep: Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum) Length = 187 Score = 34.3 bits (75), Expect = 1.9 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +1 Query: 109 LNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210 L + TG +LV+LK G GLLV+ D +MNL L Sbjct: 67 LTAATGHPMLVELKSGETLNGLLVNCDTWMNLTL 100 >UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces cerevisiae YER146w LSM5 Sm-like; n=1; Debaryomyces hansenii|Rep: Similar to sp|P40089 Saccharomyces cerevisiae YER146w LSM5 Sm-like - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) Length = 93 Score = 33.9 bits (74), Expect = 2.5 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNLVK 261 I P ++ G + V + E+KG L+ D Y+N+ L N EE + G ++K Sbjct: 21 ILPLEIIDKSIGHKIQVLMTNDKEFKGTLIGFDDYVNMVLENVEEFDNEGPKGKVIK 77 >UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; Caldivirga maquilingensis IC-167|Rep: Like-Sm ribonucleoprotein, core - Caldivirga maquilingensis IC-167 Length = 86 Score = 33.9 bits (74), Expect = 2.5 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEEL 228 + P L + KSV+VKLK G G L D MN+ L + EEL Sbjct: 10 VQPLRALGMMVNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEEL 55 >UniRef50_P40070 Cluster: U6 snRNA-associated Sm-like protein LSm4; n=3; Saccharomycetales|Rep: U6 snRNA-associated Sm-like protein LSm4 - Saccharomyces cerevisiae (Baker's yeast) Length = 187 Score = 33.5 bits (73), Expect = 3.3 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225 P L + G+ + ++LK G +G+L + D +MNL L+N E Sbjct: 3 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTE 45 >UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape) Length = 281 Score = 33.1 bits (72), Expect = 4.4 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210 P L + G +LV+LK G Y G LV+ D +MN+ L Sbjct: 89 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHL 126 >UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1; Vanderwaltozyma polyspora DSM 70294|Rep: Putative uncharacterized protein - Vanderwaltozyma polyspora DSM 70294 Length = 193 Score = 33.1 bits (72), Expect = 4.4 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216 P L + G+ + ++LK G KG+L + D +MNL L++ Sbjct: 3 PLYLLTNAKGQKITIELKNGETIKGVLTNVDNWMNLTLSD 42 >UniRef50_Q9LGE6 Cluster: Probable U6 snRNA-associated Sm-like protein LSm4; n=5; Eukaryota|Rep: Probable U6 snRNA-associated Sm-like protein LSm4 - Oryza sativa subsp. japonica (Rice) Length = 147 Score = 33.1 bits (72), Expect = 4.4 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210 P L + G +LV+LK G Y G LV+ D +MN+ L Sbjct: 3 PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHL 40 >UniRef50_UPI000156133C Cluster: PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae); n=1; Equus caballus|Rep: PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) - Equus caballus Length = 196 Score = 32.7 bits (71), Expect = 5.8 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210 P L + +LV+LK G Y G LVS D +MN+ L Sbjct: 48 PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 85 >UniRef50_Q4UBR6 Cluster: U6 snrna-associated sm-like protein lsm4, putative; n=1; Theileria annulata|Rep: U6 snrna-associated sm-like protein lsm4, putative - Theileria annulata Length = 105 Score = 32.7 bits (71), Expect = 5.8 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216 P L + + L++LK G Y G+L S D +MN+ + N Sbjct: 4 PLTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVN 43 >UniRef50_Q4MZK0 Cluster: U6 snRNA-associated protein, putative; n=1; Theileria parva|Rep: U6 snRNA-associated protein, putative - Theileria parva Length = 141 Score = 32.7 bits (71), Expect = 5.8 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216 P L + + L++LK G Y G+L S D +MN+ + N Sbjct: 4 PLTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVN 43 >UniRef50_Q1E7Q6 Cluster: Putative uncharacterized protein; n=1; Coccidioides immitis|Rep: Putative uncharacterized protein - Coccidioides immitis Length = 178 Score = 32.7 bits (71), Expect = 5.8 Identities = 14/39 (35%), Positives = 25/39 (64%) Frame = +1 Query: 106 FLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTE 222 F +LT +V+++LK +G+L S D Y+N++L + E Sbjct: 86 FFKTLTNHTVIIELKNDIRIRGILKSVDQYLNIKLDDIE 124 >UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP) homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear ribonucleoprotein (SnRNP) homolog - Methanopyrus kandleri Length = 73 Score = 32.7 bits (71), Expect = 5.8 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +1 Query: 91 INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEEL 228 + P L V+V+LK G +G LVS DG++NL L + E+ Sbjct: 1 MRPHDCLRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVEI 46 >UniRef50_Q9QXA5 Cluster: U6 snRNA-associated Sm-like protein LSm4; n=128; Eukaryota|Rep: U6 snRNA-associated Sm-like protein LSm4 - Mus musculus (Mouse) Length = 137 Score = 32.7 bits (71), Expect = 5.8 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210 P L + +LV+LK G Y G LVS D +MN+ L Sbjct: 3 PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 40 >UniRef50_Q9Y4Z0 Cluster: U6 snRNA-associated Sm-like protein LSm4; n=5; Coelomata|Rep: U6 snRNA-associated Sm-like protein LSm4 - Homo sapiens (Human) Length = 139 Score = 32.7 bits (71), Expect = 5.8 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +1 Query: 97 PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210 P L + +LV+LK G Y G LVS D +MN+ L Sbjct: 3 PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 40 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 426,496,331 Number of Sequences: 1657284 Number of extensions: 7040034 Number of successful extensions: 13102 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 12727 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13092 length of database: 575,637,011 effective HSP length: 96 effective length of database: 416,537,747 effective search space used: 35822246242 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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