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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20960
         (550 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;...   101   1e-20
UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F, puta...    95   7e-19
UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotei...    95   7e-19
UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf prot...    95   1e-18
UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20...    95   1e-18
UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotei...    89   5e-17
UniRef50_Q010Y9 Cluster: Ypt/Rab GTPase activating protein; n=13...    86   6e-16
UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F, puta...    70   4e-11
UniRef50_A6S0C4 Cluster: Predicted protein; n=2; Ascomycota|Rep:...    67   3e-10
UniRef50_Q6BPY4 Cluster: Debaryomyces hansenii chromosome E of s...    66   4e-10
UniRef50_A7EAP1 Cluster: Putative uncharacterized protein; n=2; ...    65   9e-10
UniRef50_Q6CPH1 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    60   3e-08
UniRef50_P54999 Cluster: Small nuclear ribonucleoprotein F; n=11...    60   4e-08
UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm...    58   1e-07
UniRef50_A4HNB4 Cluster: Sm-f snRNP core complex protein, putati...    54   3e-06
UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm...    53   5e-06
UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;...    52   9e-06
UniRef50_Q7RMQ6 Cluster: Putative uncharacterized protein PY0212...    52   9e-06
UniRef50_A2EH12 Cluster: Sm protein; n=1; Trichomonas vaginalis ...    49   6e-05
UniRef50_Q758M9 Cluster: AEL274Cp; n=1; Eremothecium gossypii|Re...    49   6e-05
UniRef50_A1CE19 Cluster: LSM domain protein; n=3; Trichocomaceae...    49   6e-05
UniRef50_Q4N728 Cluster: U6 small nuclear ribonucleoprotein, put...    48   1e-04
UniRef50_Q8SS46 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN F; n=1;...    48   1e-04
UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albica...    48   2e-04
UniRef50_Q3LWJ8 Cluster: MRNA splicing factor snRNP-F; n=1; Bige...    47   3e-04
UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm...    47   3e-04
UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F, puta...    46   8e-04
UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog...    45   0.001
UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm...    45   0.001
UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4; ...    45   0.001
UniRef50_Q976F2 Cluster: 90aa long hypothetical small nuclear ri...    45   0.001
UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep...    44   0.003
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th...    44   0.003
UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1; T...    42   0.012
UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu...    42   0.012
UniRef50_Q00UL7 Cluster: Putative Sm protein F; n=1; Ostreococcu...    41   0.016
UniRef50_A3DP35 Cluster: Like-Sm ribonucleoprotein, core; n=1; S...    41   0.016
UniRef50_UPI00015BACE3 Cluster: Like-Sm ribonucleoprotein, core;...    41   0.022
UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm...    40   0.029
UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2; T...    40   0.029
UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep: A...    40   0.050
UniRef50_Q06406 Cluster: U6 snRNA-associated Sm-like protein LSm...    40   0.050
UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11; E...    39   0.066
UniRef50_Q54KX4 Cluster: LSM (Like-Sm) domain-containing protein...    38   0.15 
UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M...    38   0.15 
UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A...    38   0.20 
UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2; ...    37   0.35 
UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;...    37   0.35 
UniRef50_Q8ZVU2 Cluster: Small nuclear ribonucleoprotein homolog...    36   0.82 
UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog...    35   1.1  
UniRef50_A1ZD45 Cluster: Secreted enzyme, contains two amidohydr...    35   1.4  
UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1; ...    34   1.9  
UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces cere...    34   2.5  
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C...    34   2.5  
UniRef50_P40070 Cluster: U6 snRNA-associated Sm-like protein LSm...    33   3.3  
UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole gen...    33   4.4  
UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_Q9LGE6 Cluster: Probable U6 snRNA-associated Sm-like pr...    33   4.4  
UniRef50_UPI000156133C Cluster: PREDICTED: similar to LSM4 homol...    33   5.8  
UniRef50_Q4UBR6 Cluster: U6 snrna-associated sm-like protein lsm...    33   5.8  
UniRef50_Q4MZK0 Cluster: U6 snRNA-associated protein, putative; ...    33   5.8  
UniRef50_Q1E7Q6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)...    33   5.8  
UniRef50_Q9QXA5 Cluster: U6 snRNA-associated Sm-like protein LSm...    33   5.8  
UniRef50_Q9Y4Z0 Cluster: U6 snRNA-associated Sm-like protein LSm...    33   5.8  

>UniRef50_Q24297 Cluster: Small nuclear ribonucleoprotein F; n=7;
           Fungi/Metazoa group|Rep: Small nuclear ribonucleoprotein
           F - Drosophila melanogaster (Fruit fly)
          Length = 88

 Score =  101 bits (241), Expect = 1e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           INPKPFLN LTGK VLVKLKWG EYKG LVS DGYMN+QLANTEE+++G+ TGNL
Sbjct: 7   INPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLANTEEVIEGSVTGNL 61



 Score = 34.7 bits (76), Expect = 1.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +3

Query: 255 GEVLIRCNNVLYVRGAD 305
           GEVLIRCNNVLY++G +
Sbjct: 62  GEVLIRCNNVLYIKGME 78


>UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F,
           putative, expressed; n=5; Oryza sativa|Rep: Small
           nuclear ribonucleoprotein F, putative, expressed - Oryza
           sativa subsp. japonica (Rice)
          Length = 86

 Score = 95.5 bits (227), Expect = 7e-19
 Identities = 42/55 (76%), Positives = 47/55 (85%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           +NPKPFLN+LTGK V+VKLKWG EYKG LVS D YMNLQLANTEE +DG  +GNL
Sbjct: 6   VNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60



 Score = 34.3 bits (75), Expect = 1.9
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 255 GEVLIRCNNVLYVRG 299
           GE+LIRCNNVLY+RG
Sbjct: 61  GEILIRCNNVLYLRG 75


>UniRef50_Q9SUM2 Cluster: Probable small nuclear ribonucleoprotein
           F; n=7; Magnoliophyta|Rep: Probable small nuclear
           ribonucleoprotein F - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 88

 Score = 95.5 bits (227), Expect = 7e-19
 Identities = 41/55 (74%), Positives = 46/55 (83%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           +NPKPFLN+LTGK+V+VKLKWG EYKG L S D YMNLQL NTEE +DG  TGNL
Sbjct: 6   VNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL 60



 Score = 35.5 bits (78), Expect = 0.82
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +3

Query: 255 GEVLIRCNNVLYVRG 299
           GE+LIRCNNVLYVRG
Sbjct: 61  GEILIRCNNVLYVRG 75


>UniRef50_UPI00015533A8 Cluster: PREDICTED: similar to Snrpf
           protein; n=1; Mus musculus|Rep: PREDICTED: similar to
           Snrpf protein - Mus musculus
          Length = 209

 Score = 95.1 bits (226), Expect = 1e-18
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           +NPKPFLN LTGK V+VKLKWG EYKG LVS DGYMN+QLANTEE +DG  +G+L
Sbjct: 128 LNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHL 182



 Score = 36.3 bits (80), Expect = 0.47
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 255 GEVLIRCNNVLYVRGAD 305
           GEVLIRCNNVLY+RG +
Sbjct: 183 GEVLIRCNNVLYIRGVE 199


>UniRef50_P62306 Cluster: Small nuclear ribonucleoprotein F; n=20;
           Euteleostomi|Rep: Small nuclear ribonucleoprotein F -
           Homo sapiens (Human)
          Length = 86

 Score = 95.1 bits (226), Expect = 1e-18
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           +NPKPFLN LTGK V+VKLKWG EYKG LVS DGYMN+QLANTEE +DG  +G+L
Sbjct: 5   LNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHL 59



 Score = 36.3 bits (80), Expect = 0.47
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 255 GEVLIRCNNVLYVRGAD 305
           GEVLIRCNNVLY+RG +
Sbjct: 60  GEVLIRCNNVLYIRGVE 76


>UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotein
           F; n=13; Eukaryota|Rep: Probable small nuclear
           ribonucleoprotein F - Caenorhabditis elegans
          Length = 85

 Score = 89.4 bits (212), Expect = 5e-17
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           +NPKPFLNSLTGK V+ KLKWG EYKG+LV+ D YMNLQLA+ EE +DG   GNL
Sbjct: 7   VNPKPFLNSLTGKFVVCKLKWGMEYKGVLVAVDSYMNLQLAHAEEYIDGNSQGNL 61



 Score = 35.1 bits (77), Expect = 1.1
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 255 GEVLIRCNNVLYVRGAD 305
           GE+LIRCNNVLYV G D
Sbjct: 62  GEILIRCNNVLYVGGVD 78


>UniRef50_Q010Y9 Cluster: Ypt/Rab GTPase activating protein; n=13;
           Eukaryota|Rep: Ypt/Rab GTPase activating protein -
           Ostreococcus tauri
          Length = 836

 Score = 85.8 bits (203), Expect = 6e-16
 Identities = 39/55 (70%), Positives = 44/55 (80%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           INPKPFL +LTGK V V+LKWG EY+G LVSTD YMNLQLA+TEE +DG   G L
Sbjct: 762 INPKPFLAALTGKRVAVRLKWGMEYRGFLVSTDAYMNLQLASTEEYIDGELQGAL 816



 Score = 34.7 bits (76), Expect = 1.4
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +3

Query: 255 GEVLIRCNNVLYVRGAD 305
           GEVLIRCNNV+Y+RG +
Sbjct: 817 GEVLIRCNNVMYLRGVE 833


>UniRef50_A7AQW8 Cluster: Small nuclear ribonucleoprotein F,
           putative; n=1; Babesia bovis|Rep: Small nuclear
           ribonucleoprotein F, putative - Babesia bovis
          Length = 94

 Score = 69.7 bits (163), Expect = 4e-11
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           +NPKPFL  L G++V V LKWG EYKG L S D YMN++L N EE  +G   G L
Sbjct: 22  LNPKPFLAKLVGQNVFVTLKWGMEYKGFLKSFDSYMNIELENAEEWENGVMKGTL 76


>UniRef50_A6S0C4 Cluster: Predicted protein; n=2; Ascomycota|Rep:
           Predicted protein - Botryotinia fuckeliana B05.10
          Length = 91

 Score = 66.9 bits (156), Expect = 3e-10
 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGH--EYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           INP+PFL +L  + V+++LKWG   EYKG LVS D YMN+QL+  EE +D   T  L
Sbjct: 6   INPRPFLQNLVNEEVIIRLKWGGQTEYKGKLVSIDSYMNIQLSGAEEWIDSEMTSTL 62


>UniRef50_Q6BPY4 Cluster: Debaryomyces hansenii chromosome E of
           strain CBS767 of Debaryomyces hansenii; n=1;
           Debaryomyces hansenii|Rep: Debaryomyces hansenii
           chromosome E of strain CBS767 of Debaryomyces hansenii -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 101

 Score = 66.5 bits (155), Expect = 4e-10
 Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELV 231
           INPKPFL +L GK V+V+LKW   EYKG L+S D YMNLQL  T E++
Sbjct: 7   INPKPFLKTLIGKQVIVRLKWNKTEYKGTLISIDNYMNLQLDKTSEVI 54


>UniRef50_A7EAP1 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Sclerotinia sclerotiorum 1980
          Length = 223

 Score = 65.3 bits (152), Expect = 9e-10
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGH--EYKGLLVSTDGYMNLQLANTEELVDGTCT 246
           INP+PFL +L  + V+++LKWG   EYKG LVS D YMN+QL+  EE +D   T
Sbjct: 151 INPRPFLQNLVNEEVIIRLKWGGQTEYKGKLVSIDSYMNIQLSGAEEWIDSEMT 204


>UniRef50_Q6CPH1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome E of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 112

 Score = 60.1 bits (139), Expect = 3e-08
 Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           INPKPFL+ L  K VLV LK+   +YKG LVS D Y NLQL + EE+++   +G +
Sbjct: 9   INPKPFLHQLIDKDVLVTLKFNKIQYKGRLVSVDTYFNLQLTDAEEIINDVSSGKV 64


>UniRef50_P54999 Cluster: Small nuclear ribonucleoprotein F; n=11;
           Eukaryota|Rep: Small nuclear ribonucleoprotein F -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 86

 Score = 59.7 bits (138), Expect = 4e-08
 Identities = 31/56 (55%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           +NPKPFL  L    V VKLK+   EY+G LVSTD Y NLQL   EE V G   G L
Sbjct: 13  VNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTL 68


>UniRef50_Q9UUI1 Cluster: U6 snRNA-associated Sm-like protein LSm6;
           n=33; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
           LSm6 - Schizosaccharomyces pombe (Fission yeast)
          Length = 75

 Score = 58.4 bits (135), Expect = 1e-07
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCT 246
           +P  FLN + GK VL++L  G +YKG+L   DGYMNL L  TEE V+G  T
Sbjct: 4   SPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKT 54


>UniRef50_A4HNB4 Cluster: Sm-f snRNP core complex protein, putative;
           n=5; Trypanosomatidae|Rep: Sm-f snRNP core complex
           protein, putative - Leishmania braziliensis
          Length = 77

 Score = 53.6 bits (123), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 30/43 (69%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225
           P  FL+SL GK VLVK KWG  Y+G LVS D +MNLQL +  E
Sbjct: 6   PGAFLHSLVGKKVLVKSKWGPVYEGNLVSCDTFMNLQLRDAVE 48


>UniRef50_P62312 Cluster: U6 snRNA-associated Sm-like protein LSm6;
           n=22; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
           LSm6 - Homo sapiens (Human)
          Length = 80

 Score = 52.8 bits (121), Expect = 5e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           P  FL  + G+ V+VKL  G +Y+G+L   DGYMN+ L  TEE V+G
Sbjct: 8   PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNG 54


>UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;
           Guillardia theta|Rep: Small nuclear ribonucleoprotein F
           - Guillardia theta (Cryptomonas phi)
          Length = 73

 Score = 52.0 bits (119), Expect = 9e-06
 Identities = 21/47 (44%), Positives = 31/47 (65%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELV 231
           +NPK  LN+   K+V VKLKWG  Y G+ + +D YMN+ L +  E++
Sbjct: 1   MNPKNILNNNYNKNVFVKLKWGSSYTGIFIGSDNYMNIILDSCSEVI 47


>UniRef50_Q7RMQ6 Cluster: Putative uncharacterized protein PY02122;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY02122 - Plasmodium yoelii
           yoelii
          Length = 81

 Score = 52.0 bits (119), Expect = 9e-06
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGL 174
           +NPKPFLNSL G  V++KLKWG EYKG+
Sbjct: 52  LNPKPFLNSLVGNRVIIKLKWGMEYKGI 79


>UniRef50_A2EH12 Cluster: Sm protein; n=1; Trichomonas vaginalis
           G3|Rep: Sm protein - Trichomonas vaginalis G3
          Length = 98

 Score = 49.2 bits (112), Expect = 6e-05
 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELVDGTCTG 249
           P+ F+ SL  K +++KLKW + EY G L+S D  MN+ L+ T E V G   G
Sbjct: 9   PQKFMESLLNKQIVIKLKWENIEYVGTLISFDERMNIHLSETSEYVGGKTEG 60


>UniRef50_Q758M9 Cluster: AEL274Cp; n=1; Eremothecium gossypii|Rep:
           AEL274Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 86

 Score = 49.2 bits (112), Expect = 6e-05
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGH-EYKGLLVSTDGYMNLQLANTEELVDGTCTG 249
           NPKPFL  L  + ++V LK+ +  Y+G L+STD Y N++L   EE +     G
Sbjct: 8   NPKPFLRQLVDQYIVVTLKFNNTRYRGKLMSTDNYFNIRLTEAEEFIGDVSKG 60


>UniRef50_A1CE19 Cluster: LSM domain protein; n=3;
           Trichocomaceae|Rep: LSM domain protein - Aspergillus
           clavatus
          Length = 108

 Score = 49.2 bits (112), Expect = 6e-05
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           +P  FL+ + G  V VKL  G  YKG L S DGYMN+ L  ++E +DG
Sbjct: 10  DPSAFLSEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEQSKEFMDG 57


>UniRef50_Q4N728 Cluster: U6 small nuclear ribonucleoprotein,
           putative; n=3; Aconoidasida|Rep: U6 small nuclear
           ribonucleoprotein, putative - Theileria parva
          Length = 77

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           P  ++ S+T K VLVKL  G ++KG L S D  MNL + NT E +DG
Sbjct: 6   PSAYITSITRKPVLVKLNNGSDFKGTLASLDERMNLAMENTCEFLDG 52


>UniRef50_Q8SS46 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN F; n=1;
           Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
           RIBONUCLEOPROTEIN F - Encephalitozoon cuniculi
          Length = 81

 Score = 48.0 bits (109), Expect = 1e-04
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225
           NPK FL  +  +SV V LKWG  Y+G LV++D Y N+ L    E
Sbjct: 13  NPKQFLQRMKNRSVRVALKWGQVYEGTLVASDNYFNILLDECTE 56


>UniRef50_Q6BR90 Cluster: Similar to CA5853|CaLSM6 Candida albicans
           CaLSM6; n=3; Ascomycota|Rep: Similar to CA5853|CaLSM6
           Candida albicans CaLSM6 - Debaryomyces hansenii (Yeast)
           (Torulaspora hansenii)
          Length = 84

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 24/47 (51%), Positives = 29/47 (61%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           P  FL+ + G SV V+L  G EY G L S DGYMN+ L  T+E V G
Sbjct: 17  PSVFLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGG 63


>UniRef50_Q3LWJ8 Cluster: MRNA splicing factor snRNP-F; n=1;
           Bigelowiella natans|Rep: MRNA splicing factor snRNP-F -
           Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 78

 Score = 47.2 bits (107), Expect = 3e-04
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVK-LKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTG 249
           NPKPFL +L G+ + +  +   + + G+LVS D +MN+Q+ NT E + G   G
Sbjct: 6   NPKPFLKNLVGEKITIYVILKDYSFNGILVSFDSWMNIQMFNTNESIKGMNIG 58


>UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm6;
           n=2; Pezizomycotina|Rep: U6 snRNA-associated Sm-like
           protein LSm6 - Magnaporthe grisea (Rice blast fungus)
           (Pyricularia grisea)
          Length = 83

 Score = 46.8 bits (106), Expect = 3e-04
 Identities = 24/48 (50%), Positives = 27/48 (56%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           +P  FL  + G  V VKL  G  YKG L S DGYMN+ L   EE V G
Sbjct: 13  DPTSFLGEIIGNMVTVKLNSGVIYKGELQSVDGYMNIALEKAEEWVAG 60


>UniRef50_A7ARJ0 Cluster: Small nuclear ribonucleoprotein F,
           putative; n=1; Babesia bovis|Rep: Small nuclear
           ribonucleoprotein F, putative - Babesia bovis
          Length = 83

 Score = 45.6 bits (103), Expect = 8e-04
 Identities = 21/47 (44%), Positives = 30/47 (63%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           P  ++ ++T K V+VKL  G  ++GLL S D  MNL + NT+E  DG
Sbjct: 6   PSSYIANITRKPVIVKLNNGTRFRGLLSSLDDRMNLAMENTKEYCDG 52


>UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog;
           n=5; Thermoproteaceae|Rep: Small nuclear
           ribonucleoprotein homolog - Pyrobaculum aerophilum
          Length = 80

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 21/43 (48%), Positives = 29/43 (67%)
 Frame = +1

Query: 109 LNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           L    GK VLVKL+  HE +G+L S D ++NL L + EE++DG
Sbjct: 16  LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDG 58


>UniRef50_Q5K712 Cluster: U6 snRNA-associated sm-like protein lsm6,
           putative; n=1; Filobasidiella neoformans|Rep: U6
           snRNA-associated sm-like protein lsm6, putative -
           Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 88

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225
           +P  FL ++ GK V V++  G +Y GLL   DGYMN+ L   EE
Sbjct: 16  SPSEFLRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEE 59


>UniRef50_A7F5M4 Cluster: Putative uncharacterized protein; n=4;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Sclerotinia sclerotiorum 1980
          Length = 95

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           +P  FL+ + G  V+VKL     +KG L S DGYMN+ L   EE V G
Sbjct: 13  DPSSFLSDIIGSRVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHG 60


>UniRef50_Q976F2 Cluster: 90aa long hypothetical small nuclear
           ribonucleoprotein; n=2; Thermoprotei|Rep: 90aa long
           hypothetical small nuclear ribonucleoprotein -
           Sulfolobus tokodaii
          Length = 90

 Score = 44.8 bits (101), Expect = 0.001
 Identities = 25/49 (51%), Positives = 29/49 (59%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGT 240
           NP   L + T K VLVKLK G EY G L  +DG MNL L +  E  +GT
Sbjct: 12  NPLKSLKTATNKIVLVKLKDGSEYVGRLEQSDGTMNLVLRDCIETREGT 60


>UniRef50_Q4JAL0 Cluster: Sm-like protein; n=3; Sulfolobaceae|Rep:
           Sm-like protein - Sulfolobus acidocaldarius
          Length = 87

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 24/49 (48%), Positives = 28/49 (57%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGT 240
           NP   L +   K VLVKLK G EY G L  +DG MNL L +  E  +GT
Sbjct: 7   NPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGT 55


>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
           Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
           Thermoplasma acidophilum
          Length = 83

 Score = 43.6 bits (98), Expect = 0.003
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTG 249
           + P   L S   ++VL+ +K   EY G+L   D YMN+ L N  E+++G   G
Sbjct: 8   VKPMDVLKSALSRNVLIDVKGNREYSGILEGYDVYMNIVLQNASEIINGENKG 60


>UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1;
           Thermofilum pendens Hrk 5|Rep: Like-Sm
           ribonucleoprotein, core - Thermofilum pendens (strain
           Hrk 5)
          Length = 100

 Score = 41.5 bits (93), Expect = 0.012
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVD 234
           + P   L + +GK V VKLK G EY G L  TD  MNL L + +EL +
Sbjct: 1   MQPIEHLRNQSGKGVFVKLKDGSEYMGKLRMTDAAMNLVLDDAKELTE 48


>UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4;
           Euryarchaeota|Rep: Putative snRNP Sm-like protein -
           Methanobacterium thermoautotrophicum
          Length = 81

 Score = 41.5 bits (93), Expect = 0.012
 Identities = 22/53 (41%), Positives = 30/53 (56%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNL 255
           P   L +     V++KLK   E++G+L S D +MNL L + EEL DG  T  L
Sbjct: 14  PLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRL 66


>UniRef50_Q00UL7 Cluster: Putative Sm protein F; n=1; Ostreococcus
           tauri|Rep: Putative Sm protein F - Ostreococcus tauri
          Length = 173

 Score = 41.1 bits (92), Expect = 0.016
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYK--------GLLVSTDGYMNLQLANTEE 225
           ++P  FL ++ GK+VLV+L  G +Y+        G+L   DGYMN+ +  TE+
Sbjct: 53  VSPSDFLRAIEGKTVLVRLNSGADYRGARSRRSIGVLACLDGYMNIAMEQTED 105


>UniRef50_A3DP35 Cluster: Like-Sm ribonucleoprotein, core; n=1;
           Staphylothermus marinus F1|Rep: Like-Sm
           ribonucleoprotein, core - Staphylothermus marinus
           (strain ATCC 43588 / DSM 3639 / F1)
          Length = 91

 Score = 41.1 bits (92), Expect = 0.016
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVD 234
           P  +L S   + VLVK+K GHEY G L   D  MN+ L+N +E  D
Sbjct: 11  PLKYLKSAVNQIVLVKIKDGHEYIGTLNMVDHTMNVVLSNCQEYGD 56


>UniRef50_UPI00015BACE3 Cluster: Like-Sm ribonucleoprotein, core;
           n=1; Ignicoccus hospitalis KIN4/I|Rep: Like-Sm
           ribonucleoprotein, core - Ignicoccus hospitalis KIN4/I
          Length = 91

 Score = 40.7 bits (91), Expect = 0.022
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEEL 228
           NP  +L +     VLV+LK G+EY G LV TD  MNL L +  EL
Sbjct: 14  NPLKYLRAAVDNVVLVRLKDGNEYVGKLVFTDNTMNLILDDCTEL 58


>UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm;
           n=1; Aeropyrum pernix|Rep: Putative small nucleolar RNP
           protein Sm - Aeropyrum pernix
          Length = 94

 Score = 40.3 bits (90), Expect = 0.029
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVD 234
           +NP  +L       + VKLK G EY G LV+TD  MNL L +  E+ D
Sbjct: 10  VNPFKYLKEHLNSQIYVKLKDGSEYVGKLVATDTTMNLILDDAIEVAD 57


>UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2;
           Thermoprotei|Rep: Small nuclear ribonucleoprotein -
           Cenarchaeum symbiosum
          Length = 106

 Score = 40.3 bits (90), Expect = 0.029
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGN 252
           P   L   T K+V V+LK   EYKG + + D YMNL + + EE  D     N
Sbjct: 35  PLTALQKSTKKAVTVRLKNETEYKGKMENVDSYMNLIMTDAEEFHDSKVVAN 86


>UniRef50_Q75BR7 Cluster: ACR204Cp; n=2; Saccharomycetales|Rep:
           ACR204Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 85

 Score = 39.5 bits (88), Expect = 0.050
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +1

Query: 106 FLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225
           FL+++ GK V VKL  G  Y+G L S DG+MN+ L +  E
Sbjct: 16  FLSNIIGKPVNVKLHSGMLYQGTLESIDGFMNVALVDASE 55


>UniRef50_Q06406 Cluster: U6 snRNA-associated Sm-like protein LSm6;
           n=4; Saccharomycetaceae|Rep: U6 snRNA-associated Sm-like
           protein LSm6 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 123

 Score = 39.5 bits (88), Expect = 0.050
 Identities = 22/53 (41%), Positives = 30/53 (56%)
 Frame = +1

Query: 106 FLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNLVKF 264
           FL+ + GK+V VKL  G  Y G L S DG+MN+ L++  E  +      L KF
Sbjct: 52  FLSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHYESNNNKLLNKF 104


>UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11;
           Euryarchaeota|Rep: Putative snRNP Sm-like protein -
           Pyrococcus furiosus
          Length = 76

 Score = 39.1 bits (87), Expect = 0.066
 Identities = 20/47 (42%), Positives = 28/47 (59%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           P   ++    K VLV LK G E++G L+  D ++N+ LAN E L DG
Sbjct: 5   PLDVIHKSLDKDVLVILKKGFEFRGKLIGYDIHLNVVLANAELLQDG 51


>UniRef50_Q54KX4 Cluster: LSM (Like-Sm) domain-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
           domain-containing protein - Dictyostelium discoideum AX4
          Length = 177

 Score = 37.9 bits (84), Expect = 0.15
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216
           P   L +  G  ++V+LK G  Y GLLV+ D +MN+ L N
Sbjct: 3   PLSLLRTGQGHQIMVELKNGETYNGLLVNCDNWMNINLKN 42


>UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3;
           Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
           - Methanospirillum hungatei (strain JF-1 / DSM 864)
          Length = 80

 Score = 37.9 bits (84), Expect = 0.15
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 118 LTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           L  + VL+ LK G E KG+L   D +MNL L   EE+V G
Sbjct: 18  LNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKAEEIVQG 57


>UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10;
           Archaea|Rep: Putative snRNP Sm-like protein -
           Archaeoglobus fulgidus
          Length = 77

 Score = 37.5 bits (83), Expect = 0.20
 Identities = 19/47 (40%), Positives = 27/47 (57%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDG 237
           P   LN      V+V+LK G E++G L   D +MNL L + EE+ +G
Sbjct: 5   PLDVLNRSLKSPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEEIQNG 51


>UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 67

 Score = 36.7 bits (81), Expect = 0.35
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = +1

Query: 163 YKGLLVSTDGYMNLQLANTEELVDGTCTGNLVK 261
           YKG LVS D YMN+ L + EE +D T  G L K
Sbjct: 3   YKGTLVSFDEYMNILLNDCEEWIDNTKKGTLGK 35


>UniRef50_Q8SRW7 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN G; n=1;
           Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
           RIBONUCLEOPROTEIN G - Encephalitozoon cuniculi
          Length = 78

 Score = 36.7 bits (81), Expect = 0.35
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 103 PFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225
           P L SL  K ++V++  GH  KGLL   D +MN+ L+   E
Sbjct: 7   PNLASLLHKRIVVRIGGGHTLKGLLTGYDAFMNIVLSEVTE 47


>UniRef50_Q8ZVU2 Cluster: Small nuclear ribonucleoprotein homolog;
           n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein
           homolog - Pyrobaculum aerophilum
          Length = 144

 Score = 35.5 bits (78), Expect = 0.82
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +1

Query: 109 LNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216
           LN+L G+ V V L  G  YKG+L + D  +N+ LAN
Sbjct: 16  LNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLAN 51


>UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog;
           n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein
           homolog - Pyrobaculum aerophilum
          Length = 85

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +1

Query: 94  NPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEEL 228
           +P   L  +  K ++ +LK G   KG+L + DG MNL L +  EL
Sbjct: 11  SPIKVLTKMLNKEIIARLKGGVAVKGVLTAYDGCMNLVLNDAAEL 55


>UniRef50_A1ZD45 Cluster: Secreted enzyme, contains two
           amidohydrolase related domains; n=1; Microscilla marina
           ATCC 23134|Rep: Secreted enzyme, contains two
           amidohydrolase related domains - Microscilla marina ATCC
           23134
          Length = 1022

 Score = 34.7 bits (76), Expect = 1.4
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +1

Query: 112 NSLTGKSVLVKLKWGHEYKGLLV-STDGYMNLQL 210
           N + G+S L+KLKWG   + LL+  TDGY+   L
Sbjct: 682 NPVGGQSALIKLKWGEAPEKLLIPGTDGYIKFAL 715


>UniRef50_Q0UQD0 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 187

 Score = 34.3 bits (75), Expect = 1.9
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = +1

Query: 109 LNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210
           L + TG  +LV+LK G    GLLV+ D +MNL L
Sbjct: 67  LTAATGHPMLVELKSGETLNGLLVNCDTWMNLTL 100


>UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces
           cerevisiae YER146w LSM5 Sm-like; n=1; Debaryomyces
           hansenii|Rep: Similar to sp|P40089 Saccharomyces
           cerevisiae YER146w LSM5 Sm-like - Debaryomyces hansenii
           (Yeast) (Torulaspora hansenii)
          Length = 93

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEELVDGTCTGNLVK 261
           I P   ++   G  + V +    E+KG L+  D Y+N+ L N EE  +    G ++K
Sbjct: 21  ILPLEIIDKSIGHKIQVLMTNDKEFKGTLIGFDDYVNMVLENVEEFDNEGPKGKVIK 77


>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
           Caldivirga maquilingensis IC-167|Rep: Like-Sm
           ribonucleoprotein, core - Caldivirga maquilingensis
           IC-167
          Length = 86

 Score = 33.9 bits (74), Expect = 2.5
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEEL 228
           + P   L  +  KSV+VKLK G    G L   D  MN+ L + EEL
Sbjct: 10  VQPLRALGMMVNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEEL 55


>UniRef50_P40070 Cluster: U6 snRNA-associated Sm-like protein LSm4;
           n=3; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
           protein LSm4 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 187

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEE 225
           P   L +  G+ + ++LK G   +G+L + D +MNL L+N  E
Sbjct: 3   PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTE 45


>UniRef50_A7PS14 Cluster: Chromosome chr14 scaffold_27, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr14 scaffold_27, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 281

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210
           P   L +  G  +LV+LK G  Y G LV+ D +MN+ L
Sbjct: 89  PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHL 126


>UniRef50_A7TI36 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 193

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216
           P   L +  G+ + ++LK G   KG+L + D +MNL L++
Sbjct: 3   PLYLLTNAKGQKITIELKNGETIKGVLTNVDNWMNLTLSD 42


>UniRef50_Q9LGE6 Cluster: Probable U6 snRNA-associated Sm-like
           protein LSm4; n=5; Eukaryota|Rep: Probable U6
           snRNA-associated Sm-like protein LSm4 - Oryza sativa
           subsp. japonica (Rice)
          Length = 147

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210
           P   L +  G  +LV+LK G  Y G LV+ D +MN+ L
Sbjct: 3   PLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHL 40


>UniRef50_UPI000156133C Cluster: PREDICTED: similar to LSM4 homolog,
           U6 small nuclear RNA associated (S. cerevisiae); n=1;
           Equus caballus|Rep: PREDICTED: similar to LSM4 homolog,
           U6 small nuclear RNA associated (S. cerevisiae) - Equus
           caballus
          Length = 196

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210
           P   L +     +LV+LK G  Y G LVS D +MN+ L
Sbjct: 48  PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 85


>UniRef50_Q4UBR6 Cluster: U6 snrna-associated sm-like protein lsm4,
           putative; n=1; Theileria annulata|Rep: U6
           snrna-associated sm-like protein lsm4, putative -
           Theileria annulata
          Length = 105

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216
           P   L +   +  L++LK G  Y G+L S D +MN+ + N
Sbjct: 4   PLTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVN 43


>UniRef50_Q4MZK0 Cluster: U6 snRNA-associated protein, putative;
           n=1; Theileria parva|Rep: U6 snRNA-associated protein,
           putative - Theileria parva
          Length = 141

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLAN 216
           P   L +   +  L++LK G  Y G+L S D +MN+ + N
Sbjct: 4   PLTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVN 43


>UniRef50_Q1E7Q6 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 178

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +1

Query: 106 FLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTE 222
           F  +LT  +V+++LK     +G+L S D Y+N++L + E
Sbjct: 86  FFKTLTNHTVIIELKNDIRIRGILKSVDQYLNIKLDDIE 124


>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
           homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
           ribonucleoprotein (SnRNP) homolog - Methanopyrus
           kandleri
          Length = 73

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +1

Query: 91  INPKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQLANTEEL 228
           + P   L       V+V+LK G   +G LVS DG++NL L +  E+
Sbjct: 1   MRPHDCLRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVEI 46


>UniRef50_Q9QXA5 Cluster: U6 snRNA-associated Sm-like protein LSm4;
           n=128; Eukaryota|Rep: U6 snRNA-associated Sm-like
           protein LSm4 - Mus musculus (Mouse)
          Length = 137

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210
           P   L +     +LV+LK G  Y G LVS D +MN+ L
Sbjct: 3   PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 40


>UniRef50_Q9Y4Z0 Cluster: U6 snRNA-associated Sm-like protein LSm4;
           n=5; Coelomata|Rep: U6 snRNA-associated Sm-like protein
           LSm4 - Homo sapiens (Human)
          Length = 139

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 97  PKPFLNSLTGKSVLVKLKWGHEYKGLLVSTDGYMNLQL 210
           P   L +     +LV+LK G  Y G LVS D +MN+ L
Sbjct: 3   PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINL 40


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,496,331
Number of Sequences: 1657284
Number of extensions: 7040034
Number of successful extensions: 13102
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 12727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13092
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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