Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20959
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.1  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.5  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +2

Query: 515 WKKTERHDIFANKARLEKKKYTLHPGHTDY 604
           W+ + RH++  NK  ++  ++   PG  +Y
Sbjct: 127 WQNSIRHNLSLNKCFVKVPRHYDDPGKGNY 156


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 621 RSKRQVEEVWCDLHLHRP*W 680
           + K  V +V+  L +HRP W
Sbjct: 76  KQKEDVHKVFQHLMIHRPNW 95


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 41  IMITVQMRKTGKKL*WLVVTIKLLYLRVYAA 133
           I  +++  KTG ++  L+ TIK  + R YAA
Sbjct: 292 ISYSLEKLKTGDEIQDLISTIKDNFPRFYAA 322


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 41  IMITVQMRKTGKKL*WLVVTIKLLYLRVYAA 133
           I  +++  KTG ++  L+ TIK  + R YAA
Sbjct: 292 ISYSLEKLKTGDEIQDLISTIKDNFPRFYAA 322


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 582 KVYFFFSNLALFANISCLSVF 520
           ++YF++S   L   I CL +F
Sbjct: 317 RLYFYWSFALLITRIVCLCLF 337


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -2

Query: 325 WPHCCNKYRASSSSRSCFPFGINSSRCLNSEH 230
           WP        SSS ++  P G    RC   +H
Sbjct: 81  WPFAWGSLXRSSSPQTSAPTGPPIVRCALRKH 112


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 98  TIKLLYLRVYAAMMMHYLMKMKINYYGILLFL 193
           T+ LL+   +    +H+L+     YY  ++ L
Sbjct: 80  TVHLLFYCPFIIFTVHFLLCTYYFYYAFIILL 111


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = -3

Query: 585 CKVYFFFSNLAL-FANISCLSVFFQIYRIGRVLRQTEFVLCSALSSESLFRVLLGHFRNF 409
           C ++   S L   F  I  L +         ++ Q  FV+C  + SE +  + L +    
Sbjct: 223 CTLHHHLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVICVLVQSEKIVWLHLVYISFL 282

Query: 408 GIL 400
           GI+
Sbjct: 283 GII 285


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 548 LQIYHAFQFFSKYIELDEFSDRPSSYFVLPYQVKVF 441
           +++   F F SKYI +   S+   +  +   Q+K++
Sbjct: 169 IELEKEFTFVSKYITIKRKSELAENLGLSERQIKIW 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,297
Number of Sequences: 336
Number of extensions: 3848
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)