Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20959
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    25   3.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.9  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    23   6.8  

>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +2

Query: 296 GPVLIATMWPQCRGSLETETHFCTNSTSRKSLVRRRMPKFRKWPKSTR 439
           GP     M+PQ RG  ++     T+ T     ++    ++   P++TR
Sbjct: 12  GPQKWPEMFPQARGQRQSPVDIVTSKTQNSGDLQENPLRWTYVPENTR 59


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 105 LIVTTNHYSFFPVFLIWTVIIIIF 34
           L+V  NH    P+FL  T+ ++ F
Sbjct: 613 LLVDVNHIPLQPMFLTTTIAVVYF 636



 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 307 KYRASSSSRSCFPFGINSSRCLNSEHTL 224
           K   + S R+C P   N+  CL  + TL
Sbjct: 6   KQEVNLSRRACRPTTTNNDDCLQEQRTL 33


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +2

Query: 539  IFANKA-RLEKKKYTLH--PGHTDYMDRFLEEQEASG 640
            IFA+ A R    KY LH  PG  + +DRF+  Q+ +G
Sbjct: 2060 IFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENG 2096


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 374 WSLCRNAFPSQGFLCI 327
           +SLC N+FP    LC+
Sbjct: 249 YSLCTNSFPLGTLLCV 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,670
Number of Sequences: 2352
Number of extensions: 15563
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)