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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20959
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80954-1|AAB38099.1|  345|Caenorhabditis elegans Hypothetical pr...    54   7e-08
U41264-8|AAA82428.2|  239|Caenorhabditis elegans Hypothetical pr...    54   7e-08
U53180-4|AAA96286.2|  558|Caenorhabditis elegans Suppressor of p...    38   0.005
AY160228-1|AAN62581.1|  558|Caenorhabditis elegans suppressor of...    38   0.005
AF548624-1|AAN59932.1|  558|Caenorhabditis elegans suppressor of...    38   0.005
AF067948-4|AAO25983.1|  756|Caenorhabditis elegans Egl-27 relate...    35   0.047
AF067948-3|AAO25984.1|  870|Caenorhabditis elegans Egl-27 relate...    35   0.047
AF067948-2|AAD34654.1|  870|Caenorhabditis elegans Egl-27 relate...    35   0.047
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate...    35   0.047
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe...    33   0.25 
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe...    33   0.25 
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.     33   0.25 
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U00036-15|AAK29857.1|  731|Caenorhabditis elegans Hypothetical p...    31   1.0  
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond...    31   1.0  
AF143148-1|AAD37914.1|  315|Caenorhabditis elegans R151.8B prote...    31   1.0  
Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z81050-1|CAB02850.1|  582|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z68493-4|CAA92791.1|  520|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z36719-4|CAA85315.2|  513|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF039039-7|AAB94178.1|  437|Caenorhabditis elegans Aldehyde dehy...    29   4.1  
U38377-1|AAA79747.2|  283|Caenorhabditis elegans Sox (mammalian ...    28   5.4  
Z50044-3|CAA90355.1|  389|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z70210-5|CAA94155.1|  312|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AC199240-1|ABO33278.1|  427|Caenorhabditis elegans Hypothetical ...    27   9.5  

>U80954-1|AAB38099.1|  345|Caenorhabditis elegans Hypothetical
           protein T07F8.4 protein.
          Length = 345

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
 Frame = +3

Query: 246 HRDELIPKGKQLRDDEEALYLLQQCGHNAEEALRRKRISAQTPPHASLWS------EEEC 407
           H     P G + RDDE+AL  L +   + E+A           P  ++ S      E E 
Sbjct: 186 HDQPCPPAGTESRDDEDALCALYRSNFDTEKAKESFPFPHINAPFRTVRSDALGFDESEA 245

Query: 408 RNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKG 533
           + FE  L+ +GKDF LIR+ ++  R VGEL+++Y   K   G
Sbjct: 246 KAFEESLELYGKDFSLIRRLRLPYRKVGELIEYYYQWKLTPG 287


>U41264-8|AAA82428.2|  239|Caenorhabditis elegans Hypothetical
           protein F10E7.11 protein.
          Length = 239

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
 Frame = +3

Query: 246 HRDELIPKGKQLRDDEEALYLLQQCGHNAEEALRRKRISAQTPPHASLWS------EEEC 407
           H     P G + RDDE+AL  L +   + E+A           P  ++ S      E E 
Sbjct: 80  HDQPCPPAGTESRDDEDALCALYRSNFDTEKAKESFPFPHINAPFRTVRSDALGFDESEA 139

Query: 408 RNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKG 533
           + FE  L+ +GKDF LIR+ ++  R VGEL+++Y   K   G
Sbjct: 140 KAFEESLELYGKDFSLIRRLRLPYRKVGELIEYYYQWKLTPG 181


>U53180-4|AAA96286.2|  558|Caenorhabditis elegans Suppressor of
           presenilin defectprotein 1 protein.
          Length = 558

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = +3

Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470
           + ALY+L     N + A+      A+      +W+++E   FEN  +  GK+F  IR + 
Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223

Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560
           +  RS+  +VQFY   KK +K + ++  K D
Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254


>AY160228-1|AAN62581.1|  558|Caenorhabditis elegans suppressor of
           presenilin 1 protein.
          Length = 558

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = +3

Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470
           + ALY+L     N + A+      A+      +W+++E   FEN  +  GK+F  IR + 
Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223

Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560
           +  RS+  +VQFY   KK +K + ++  K D
Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254


>AF548624-1|AAN59932.1|  558|Caenorhabditis elegans suppressor of
           presenilin defect protein.
          Length = 558

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = +3

Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470
           + ALY+L     N + A+      A+      +W+++E   FEN  +  GK+F  IR + 
Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223

Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560
           +  RS+  +VQFY   KK +K + ++  K D
Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254


>AF067948-4|AAO25983.1|  756|Caenorhabditis elegans Egl-27 related
           protein 1, isoform c protein.
          Length = 756

 Score = 35.1 bits (77), Expect = 0.047
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521
           WS  E   FE+ L   GKDF+ IR   +  +S+ ++V++Y   K
Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527


>AF067948-3|AAO25984.1|  870|Caenorhabditis elegans Egl-27 related
           protein 1, isoform d protein.
          Length = 870

 Score = 35.1 bits (77), Expect = 0.047
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521
           WS  E   FE+ L   GKDF+ IR   +  +S+ ++V++Y   K
Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527


>AF067948-2|AAD34654.1|  870|Caenorhabditis elegans Egl-27 related
           protein 1, isoform b protein.
          Length = 870

 Score = 35.1 bits (77), Expect = 0.047
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521
           WS  E   FE+ L   GKDF+ IR   +  +S+ ++V++Y   K
Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527


>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
           protein 1, isoform a protein.
          Length = 1022

 Score = 35.1 bits (77), Expect = 0.047
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521
           WS  E   FE+ L   GKDF+ IR   +  +S+ ++V++Y   K
Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527


>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
           defective protein 27,isoform b protein.
          Length = 1124

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467
           +EA+  L + G+  ++AL     +           ++++ + F  G+K  GK+F  I + 
Sbjct: 300 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 359

Query: 468 KVRTRSVGELVQFYIFGKK 524
            +   S  +LV +Y   KK
Sbjct: 360 LLPHHSREQLVSYYYLWKK 378


>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
           defective protein 27,isoform a protein.
          Length = 1129

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467
           +EA+  L + G+  ++AL     +           ++++ + F  G+K  GK+F  I + 
Sbjct: 303 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 362

Query: 468 KVRTRSVGELVQFYIFGKK 524
            +   S  +LV +Y   KK
Sbjct: 363 LLPHHSREQLVSYYYLWKK 381


>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
          Length = 1129

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +3

Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467
           +EA+  L + G+  ++AL     +           ++++ + F  G+K  GK+F  I + 
Sbjct: 303 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 362

Query: 468 KVRTRSVGELVQFYIFGKK 524
            +   S  +LV +Y   KK
Sbjct: 363 LLPHHSREQLVSYYYLWKK 381


>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
            R13G10.1 protein.
          Length = 1469

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2

Query: 404  MPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTR 499
            +P+F ++P +TR+ LS++ +++    V RR R
Sbjct: 1404 LPEFNRFPPATRRELSVEDSDEDDEPVRRRPR 1435


>U00036-15|AAK29857.1|  731|Caenorhabditis elegans Hypothetical
           protein R151.8 protein.
          Length = 731

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 375 PHASLWSEEECRNFENGLKAHGKDF 449
           P    WS +E   F +G+K HGKDF
Sbjct: 86  PKRRAWSFDEVCAFHDGIKLHGKDF 110


>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
            condensation protein protein.
          Length = 1469

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2

Query: 404  MPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTR 499
            +P+F ++P +TR+ LS++ +++    V RR R
Sbjct: 1404 LPEFNRFPPATRRELSVEDSDEDDEPVRRRPR 1435


>AF143148-1|AAD37914.1|  315|Caenorhabditis elegans R151.8B protein
           protein.
          Length = 315

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 375 PHASLWSEEECRNFENGLKAHGKDF 449
           P    WS +E   F +G+K HGKDF
Sbjct: 86  PKRRAWSFDEVCAFHDGIKLHGKDF 110


>Z77664-1|CAB01216.2|  900|Caenorhabditis elegans Hypothetical
           protein F53H10.2 protein.
          Length = 900

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +3

Query: 387 LWSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKGMIYLQIKLDWR 566
           LW+ +E   F++ +    KDF  +   ++  +SV E VQFY   KK     Y +++   R
Sbjct: 564 LWTPDEIYQFQDAIYQSEKDFDKVAV-ELPGKSVKECVQFYYTWKKDCPDDYRKLRNLRR 622

Query: 567 RKSILCI 587
           ++ +L I
Sbjct: 623 KRQLLDI 629


>Z81050-1|CAB02850.1|  582|Caenorhabditis elegans Hypothetical
           protein C50B6.2 protein.
          Length = 582

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 498 RVLRQTEFVLCSALSSESLFRVLLGHFRNFGILLLTK 388
           RV+  T  +L  A SS+SLF     HF +   +L+ K
Sbjct: 418 RVIANTTHLLAKAFSSDSLFEQAAAHFNDTKNILIAK 454


>Z68493-4|CAA92791.1|  520|Caenorhabditis elegans Hypothetical
           protein C33A12.6 protein.
          Length = 520

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 576 YFFFSNLALFANISCLSVFFQIYRIGRVLRQTEFVLCSALSSES 445
           YFF   +A+ A IS  S++     +  V+R+  F  CS + S++
Sbjct: 476 YFFLDIIAILAVISLFSLYISYIILRAVIRKIFFSKCSEVKSKT 519


>Z36719-4|CAA85315.2|  513|Caenorhabditis elegans Hypothetical
           protein C06C3.8 protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = -3

Query: 492 LRQTEFVLCSALSSESLFRVLLGHFRNFGILLLTKDLREVEFVQKCVSVSRLPLHCGHIV 313
           LR  E   CS +  +    + +   RN  +  +  D+ +   VQ C+  SRLP +  H  
Sbjct: 372 LRVRESAECSDMIKDDKNLINIDDERNMKLDHVRTDISDTSIVQTCMDSSRLPSNDEHPG 431

Query: 312 AISTGPLHH 286
           A  T  +HH
Sbjct: 432 AKPT-LIHH 439


>AF039039-7|AAB94178.1|  437|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 5 protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 619 RGARGKWRKCGATCIS 666
           R ARGKW  CG TC++
Sbjct: 231 RIARGKWLNCGQTCLA 246


>U38377-1|AAA79747.2|  283|Caenorhabditis elegans Sox (mammalian sry
           box) familyprotein 2, isoform a protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/68 (20%), Positives = 28/68 (41%)
 Frame = +2

Query: 392 VRRRMPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTRPILYIWKKTERHDIFANKARLEKK 571
           V+R M  F  W +  RK+++L+  +   + + +R      +  + E+        RL   
Sbjct: 60  VKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAI 119

Query: 572 KYTLHPGH 595
               HP +
Sbjct: 120 HMKEHPDY 127


>Z50044-3|CAA90355.1|  389|Caenorhabditis elegans Hypothetical
           protein F22B5.3 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 387 LWSEEECRNFENGLKAHGKDFHLIRQNKVRTRSV 488
           L+ ++ECRN E G +  G +      N  RTRS+
Sbjct: 58  LFDQQECRNDEGGRQVAGIELPFDTCNVARTRSL 91


>Z70210-5|CAA94155.1|  312|Caenorhabditis elegans Hypothetical
           protein K08H2.5 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 22/85 (25%), Positives = 33/85 (38%)
 Frame = +2

Query: 431 STRKRLSLDKAEQSTNSVCRRTRPILYIWKKTERHDIFANKARLEKKKYTLHPGHTDYMD 610
           ST   L + K   S   VC+R  P     KK    ++      + K   T+H     Y+ 
Sbjct: 96  STLGCLVMTKEGDSLGDVCKRNDP-----KKFSPTNVLKIMLSVGKSLQTIHS--LGYIH 148

Query: 611 RFLEEQEASGGSVVRPASPSPMMDY 685
           R +          + PASP  ++DY
Sbjct: 149 RDIHWNNVLFAKTITPASPCKLIDY 173


>AC199240-1|ABO33278.1|  427|Caenorhabditis elegans Hypothetical
           protein 2L52.1 protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 410 KFRKWPKSTRKRLSLDKAEQST 475
           K R WPK  +KRLS  +  Q T
Sbjct: 236 KRRNWPKRVKKRLSTQRNNQKT 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,640,358
Number of Sequences: 27780
Number of extensions: 364948
Number of successful extensions: 1190
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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