BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20959 (686 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U80954-1|AAB38099.1| 345|Caenorhabditis elegans Hypothetical pr... 54 7e-08 U41264-8|AAA82428.2| 239|Caenorhabditis elegans Hypothetical pr... 54 7e-08 U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of p... 38 0.005 AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of... 38 0.005 AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of... 38 0.005 AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 35 0.047 AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 35 0.047 AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 35 0.047 AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 35 0.047 U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 33 0.25 U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 33 0.25 AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 33 0.25 Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 31 1.0 U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical p... 31 1.0 L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 31 1.0 AF143148-1|AAD37914.1| 315|Caenorhabditis elegans R151.8B prote... 31 1.0 Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 30 1.3 Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical pr... 29 2.4 Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical pr... 29 2.4 Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical pr... 29 3.1 AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 29 4.1 U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian ... 28 5.4 Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical pr... 28 7.2 Z70210-5|CAA94155.1| 312|Caenorhabditis elegans Hypothetical pr... 27 9.5 AC199240-1|ABO33278.1| 427|Caenorhabditis elegans Hypothetical ... 27 9.5 >U80954-1|AAB38099.1| 345|Caenorhabditis elegans Hypothetical protein T07F8.4 protein. Length = 345 Score = 54.4 bits (125), Expect = 7e-08 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Frame = +3 Query: 246 HRDELIPKGKQLRDDEEALYLLQQCGHNAEEALRRKRISAQTPPHASLWS------EEEC 407 H P G + RDDE+AL L + + E+A P ++ S E E Sbjct: 186 HDQPCPPAGTESRDDEDALCALYRSNFDTEKAKESFPFPHINAPFRTVRSDALGFDESEA 245 Query: 408 RNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKG 533 + FE L+ +GKDF LIR+ ++ R VGEL+++Y K G Sbjct: 246 KAFEESLELYGKDFSLIRRLRLPYRKVGELIEYYYQWKLTPG 287 >U41264-8|AAA82428.2| 239|Caenorhabditis elegans Hypothetical protein F10E7.11 protein. Length = 239 Score = 54.4 bits (125), Expect = 7e-08 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Frame = +3 Query: 246 HRDELIPKGKQLRDDEEALYLLQQCGHNAEEALRRKRISAQTPPHASLWS------EEEC 407 H P G + RDDE+AL L + + E+A P ++ S E E Sbjct: 80 HDQPCPPAGTESRDDEDALCALYRSNFDTEKAKESFPFPHINAPFRTVRSDALGFDESEA 139 Query: 408 RNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKG 533 + FE L+ +GKDF LIR+ ++ R VGEL+++Y K G Sbjct: 140 KAFEESLELYGKDFSLIRRLRLPYRKVGELIEYYYQWKLTPG 181 >U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of presenilin defectprotein 1 protein. Length = 558 Score = 38.3 bits (85), Expect = 0.005 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Frame = +3 Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470 + ALY+L N + A+ A+ +W+++E FEN + GK+F IR + Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223 Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560 + RS+ +VQFY KK +K + ++ K D Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254 >AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of presenilin 1 protein. Length = 558 Score = 38.3 bits (85), Expect = 0.005 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Frame = +3 Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470 + ALY+L N + A+ A+ +W+++E FEN + GK+F IR + Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223 Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560 + RS+ +VQFY KK +K + ++ K D Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254 >AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of presenilin defect protein. Length = 558 Score = 38.3 bits (85), Expect = 0.005 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Frame = +3 Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470 + ALY+L N + A+ A+ +W+++E FEN + GK+F IR + Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223 Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560 + RS+ +VQFY KK +K + ++ K D Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254 >AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related protein 1, isoform c protein. Length = 756 Score = 35.1 bits (77), Expect = 0.047 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +3 Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521 WS E FE+ L GKDF+ IR + +S+ ++V++Y K Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527 >AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related protein 1, isoform d protein. Length = 870 Score = 35.1 bits (77), Expect = 0.047 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +3 Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521 WS E FE+ L GKDF+ IR + +S+ ++V++Y K Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527 >AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related protein 1, isoform b protein. Length = 870 Score = 35.1 bits (77), Expect = 0.047 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +3 Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521 WS E FE+ L GKDF+ IR + +S+ ++V++Y K Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527 >AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related protein 1, isoform a protein. Length = 1022 Score = 35.1 bits (77), Expect = 0.047 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +3 Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521 WS E FE+ L GKDF+ IR + +S+ ++V++Y K Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527 >U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective protein 27,isoform b protein. Length = 1124 Score = 32.7 bits (71), Expect = 0.25 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +3 Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467 +EA+ L + G+ ++AL + ++++ + F G+K GK+F I + Sbjct: 300 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 359 Query: 468 KVRTRSVGELVQFYIFGKK 524 + S +LV +Y KK Sbjct: 360 LLPHHSREQLVSYYYLWKK 378 >U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective protein 27,isoform a protein. Length = 1129 Score = 32.7 bits (71), Expect = 0.25 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +3 Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467 +EA+ L + G+ ++AL + ++++ + F G+K GK+F I + Sbjct: 303 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 362 Query: 468 KVRTRSVGELVQFYIFGKK 524 + S +LV +Y KK Sbjct: 363 LLPHHSREQLVSYYYLWKK 381 >AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. Length = 1129 Score = 32.7 bits (71), Expect = 0.25 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Frame = +3 Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467 +EA+ L + G+ ++AL + ++++ + F G+K GK+F I + Sbjct: 303 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 362 Query: 468 KVRTRSVGELVQFYIFGKK 524 + S +LV +Y KK Sbjct: 363 LLPHHSREQLVSYYYLWKK 381 >Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein R13G10.1 protein. Length = 1469 Score = 30.7 bits (66), Expect = 1.0 Identities = 11/32 (34%), Positives = 22/32 (68%) Frame = +2 Query: 404 MPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTR 499 +P+F ++P +TR+ LS++ +++ V RR R Sbjct: 1404 LPEFNRFPPATRRELSVEDSDEDDEPVRRRPR 1435 >U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical protein R151.8 protein. Length = 731 Score = 30.7 bits (66), Expect = 1.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 Query: 375 PHASLWSEEECRNFENGLKAHGKDF 449 P WS +E F +G+K HGKDF Sbjct: 86 PKRRAWSFDEVCAFHDGIKLHGKDF 110 >L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome condensation protein protein. Length = 1469 Score = 30.7 bits (66), Expect = 1.0 Identities = 11/32 (34%), Positives = 22/32 (68%) Frame = +2 Query: 404 MPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTR 499 +P+F ++P +TR+ LS++ +++ V RR R Sbjct: 1404 LPEFNRFPPATRRELSVEDSDEDDEPVRRRPR 1435 >AF143148-1|AAD37914.1| 315|Caenorhabditis elegans R151.8B protein protein. Length = 315 Score = 30.7 bits (66), Expect = 1.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 Query: 375 PHASLWSEEECRNFENGLKAHGKDF 449 P WS +E F +G+K HGKDF Sbjct: 86 PKRRAWSFDEVCAFHDGIKLHGKDF 110 >Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical protein F53H10.2 protein. Length = 900 Score = 30.3 bits (65), Expect = 1.3 Identities = 20/67 (29%), Positives = 35/67 (52%) Frame = +3 Query: 387 LWSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKGMIYLQIKLDWR 566 LW+ +E F++ + KDF + ++ +SV E VQFY KK Y +++ R Sbjct: 564 LWTPDEIYQFQDAIYQSEKDFDKVAV-ELPGKSVKECVQFYYTWKKDCPDDYRKLRNLRR 622 Query: 567 RKSILCI 587 ++ +L I Sbjct: 623 KRQLLDI 629 >Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical protein C50B6.2 protein. Length = 582 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -3 Query: 498 RVLRQTEFVLCSALSSESLFRVLLGHFRNFGILLLTK 388 RV+ T +L A SS+SLF HF + +L+ K Sbjct: 418 RVIANTTHLLAKAFSSDSLFEQAAAHFNDTKNILIAK 454 >Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical protein C33A12.6 protein. Length = 520 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -3 Query: 576 YFFFSNLALFANISCLSVFFQIYRIGRVLRQTEFVLCSALSSES 445 YFF +A+ A IS S++ + V+R+ F CS + S++ Sbjct: 476 YFFLDIIAILAVISLFSLYISYIILRAVIRKIFFSKCSEVKSKT 519 >Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical protein C06C3.8 protein. Length = 513 Score = 29.1 bits (62), Expect = 3.1 Identities = 20/69 (28%), Positives = 31/69 (44%) Frame = -3 Query: 492 LRQTEFVLCSALSSESLFRVLLGHFRNFGILLLTKDLREVEFVQKCVSVSRLPLHCGHIV 313 LR E CS + + + + RN + + D+ + VQ C+ SRLP + H Sbjct: 372 LRVRESAECSDMIKDDKNLINIDDERNMKLDHVRTDISDTSIVQTCMDSSRLPSNDEHPG 431 Query: 312 AISTGPLHH 286 A T +HH Sbjct: 432 AKPT-LIHH 439 >AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehydrogenase protein 5 protein. Length = 437 Score = 28.7 bits (61), Expect = 4.1 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +1 Query: 619 RGARGKWRKCGATCIS 666 R ARGKW CG TC++ Sbjct: 231 RIARGKWLNCGQTCLA 246 >U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian sry box) familyprotein 2, isoform a protein. Length = 283 Score = 28.3 bits (60), Expect = 5.4 Identities = 14/68 (20%), Positives = 28/68 (41%) Frame = +2 Query: 392 VRRRMPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTRPILYIWKKTERHDIFANKARLEKK 571 V+R M F W + RK+++L+ + + + +R + + E+ RL Sbjct: 60 VKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAI 119 Query: 572 KYTLHPGH 595 HP + Sbjct: 120 HMKEHPDY 127 >Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical protein F22B5.3 protein. Length = 389 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 Query: 387 LWSEEECRNFENGLKAHGKDFHLIRQNKVRTRSV 488 L+ ++ECRN E G + G + N RTRS+ Sbjct: 58 LFDQQECRNDEGGRQVAGIELPFDTCNVARTRSL 91 >Z70210-5|CAA94155.1| 312|Caenorhabditis elegans Hypothetical protein K08H2.5 protein. Length = 312 Score = 27.5 bits (58), Expect = 9.5 Identities = 22/85 (25%), Positives = 33/85 (38%) Frame = +2 Query: 431 STRKRLSLDKAEQSTNSVCRRTRPILYIWKKTERHDIFANKARLEKKKYTLHPGHTDYMD 610 ST L + K S VC+R P KK ++ + K T+H Y+ Sbjct: 96 STLGCLVMTKEGDSLGDVCKRNDP-----KKFSPTNVLKIMLSVGKSLQTIHS--LGYIH 148 Query: 611 RFLEEQEASGGSVVRPASPSPMMDY 685 R + + PASP ++DY Sbjct: 149 RDIHWNNVLFAKTITPASPCKLIDY 173 >AC199240-1|ABO33278.1| 427|Caenorhabditis elegans Hypothetical protein 2L52.1 protein. Length = 427 Score = 27.5 bits (58), Expect = 9.5 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 410 KFRKWPKSTRKRLSLDKAEQST 475 K R WPK +KRLS + Q T Sbjct: 236 KRRNWPKRVKKRLSTQRNNQKT 257 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,640,358 Number of Sequences: 27780 Number of extensions: 364948 Number of successful extensions: 1190 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1188 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1571291122 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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