Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20959
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80954-1|AAB38099.1| 345|Caenorhabditis elegans Hypothetical pr... 54 7e-08
U41264-8|AAA82428.2| 239|Caenorhabditis elegans Hypothetical pr... 54 7e-08
U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of p... 38 0.005
AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of... 38 0.005
AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of... 38 0.005
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 35 0.047
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 35 0.047
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 35 0.047
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 35 0.047
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 33 0.25
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 33 0.25
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 33 0.25
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 31 1.0
U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical p... 31 1.0
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 31 1.0
AF143148-1|AAD37914.1| 315|Caenorhabditis elegans R151.8B prote... 31 1.0
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 29 4.1
U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian ... 28 5.4
Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z70210-5|CAA94155.1| 312|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC199240-1|ABO33278.1| 427|Caenorhabditis elegans Hypothetical ... 27 9.5
>U80954-1|AAB38099.1| 345|Caenorhabditis elegans Hypothetical
protein T07F8.4 protein.
Length = 345
Score = 54.4 bits (125), Expect = 7e-08
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Frame = +3
Query: 246 HRDELIPKGKQLRDDEEALYLLQQCGHNAEEALRRKRISAQTPPHASLWS------EEEC 407
H P G + RDDE+AL L + + E+A P ++ S E E
Sbjct: 186 HDQPCPPAGTESRDDEDALCALYRSNFDTEKAKESFPFPHINAPFRTVRSDALGFDESEA 245
Query: 408 RNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKG 533
+ FE L+ +GKDF LIR+ ++ R VGEL+++Y K G
Sbjct: 246 KAFEESLELYGKDFSLIRRLRLPYRKVGELIEYYYQWKLTPG 287
>U41264-8|AAA82428.2| 239|Caenorhabditis elegans Hypothetical
protein F10E7.11 protein.
Length = 239
Score = 54.4 bits (125), Expect = 7e-08
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Frame = +3
Query: 246 HRDELIPKGKQLRDDEEALYLLQQCGHNAEEALRRKRISAQTPPHASLWS------EEEC 407
H P G + RDDE+AL L + + E+A P ++ S E E
Sbjct: 80 HDQPCPPAGTESRDDEDALCALYRSNFDTEKAKESFPFPHINAPFRTVRSDALGFDESEA 139
Query: 408 RNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKG 533
+ FE L+ +GKDF LIR+ ++ R VGEL+++Y K G
Sbjct: 140 KAFEESLELYGKDFSLIRRLRLPYRKVGELIEYYYQWKLTPG 181
>U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of
presenilin defectprotein 1 protein.
Length = 558
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470
+ ALY+L N + A+ A+ +W+++E FEN + GK+F IR +
Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223
Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560
+ RS+ +VQFY KK +K + ++ K D
Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254
>AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of
presenilin 1 protein.
Length = 558
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470
+ ALY+L N + A+ A+ +W+++E FEN + GK+F IR +
Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223
Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560
+ RS+ +VQFY KK +K + ++ K D
Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254
>AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of
presenilin defect protein.
Length = 558
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 291 EEALYLLQQCGHNAEEALRRKRISAQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQNK 470
+ ALY+L N + A+ A+ +W+++E FEN + GK+F IR +
Sbjct: 168 DRALYILTINNFNFDSAIAEV---ARRNELKDVWTDQEITLFENCYQIFGKNFSQIR-SA 223
Query: 471 VRTRSVGELVQFYIFGKK-LKGMIYLQIKLD 560
+ RS+ +VQFY KK +K + ++ K D
Sbjct: 224 LCHRSLQSIVQFYYESKKRVKYLNFVNSKCD 254
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521
WS E FE+ L GKDF+ IR + +S+ ++V++Y K
Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521
WS E FE+ L GKDF+ IR + +S+ ++V++Y K
Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521
WS E FE+ L GKDF+ IR + +S+ ++V++Y K
Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 390 WSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGK 521
WS E FE+ L GKDF+ IR + +S+ ++V++Y K
Sbjct: 484 WSTPEMNLFEDALDKVGKDFNEIRAEYLPWKSIRDIVEYYYLMK 527
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467
+EA+ L + G+ ++AL + ++++ + F G+K GK+F I +
Sbjct: 300 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 359
Query: 468 KVRTRSVGELVQFYIFGKK 524
+ S +LV +Y KK
Sbjct: 360 LLPHHSREQLVSYYYLWKK 378
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467
+EA+ L + G+ ++AL + ++++ + F G+K GK+F I +
Sbjct: 303 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 362
Query: 468 KVRTRSVGELVQFYIFGKK 524
+ S +LV +Y KK
Sbjct: 363 LLPHHSREQLVSYYYLWKK 381
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 291 EEALYLLQQCGHNAEEALRRKRIS-AQTPPHASLWSEEECRNFENGLKAHGKDFHLIRQN 467
+EA+ L + G+ ++AL + ++++ + F G+K GK+F I +
Sbjct: 303 DEAIIQLHRSGYKIDDALSELNANDIILTTDVDNMTQDDAKKFAKGIKQLGKNFSRIHRE 362
Query: 468 KVRTRSVGELVQFYIFGKK 524
+ S +LV +Y KK
Sbjct: 363 LLPHHSREQLVSYYYLWKK 381
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
R13G10.1 protein.
Length = 1469
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 404 MPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTR 499
+P+F ++P +TR+ LS++ +++ V RR R
Sbjct: 1404 LPEFNRFPPATRRELSVEDSDEDDEPVRRRPR 1435
>U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical
protein R151.8 protein.
Length = 731
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 375 PHASLWSEEECRNFENGLKAHGKDF 449
P WS +E F +G+K HGKDF
Sbjct: 86 PKRRAWSFDEVCAFHDGIKLHGKDF 110
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 404 MPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTR 499
+P+F ++P +TR+ LS++ +++ V RR R
Sbjct: 1404 LPEFNRFPPATRRELSVEDSDEDDEPVRRRPR 1435
>AF143148-1|AAD37914.1| 315|Caenorhabditis elegans R151.8B protein
protein.
Length = 315
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 375 PHASLWSEEECRNFENGLKAHGKDF 449
P WS +E F +G+K HGKDF
Sbjct: 86 PKRRAWSFDEVCAFHDGIKLHGKDF 110
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 387 LWSEEECRNFENGLKAHGKDFHLIRQNKVRTRSVGELVQFYIFGKKLKGMIYLQIKLDWR 566
LW+ +E F++ + KDF + ++ +SV E VQFY KK Y +++ R
Sbjct: 564 LWTPDEIYQFQDAIYQSEKDFDKVAV-ELPGKSVKECVQFYYTWKKDCPDDYRKLRNLRR 622
Query: 567 RKSILCI 587
++ +L I
Sbjct: 623 KRQLLDI 629
>Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical
protein C50B6.2 protein.
Length = 582
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 498 RVLRQTEFVLCSALSSESLFRVLLGHFRNFGILLLTK 388
RV+ T +L A SS+SLF HF + +L+ K
Sbjct: 418 RVIANTTHLLAKAFSSDSLFEQAAAHFNDTKNILIAK 454
>Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical
protein C33A12.6 protein.
Length = 520
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 576 YFFFSNLALFANISCLSVFFQIYRIGRVLRQTEFVLCSALSSES 445
YFF +A+ A IS S++ + V+R+ F CS + S++
Sbjct: 476 YFFLDIIAILAVISLFSLYISYIILRAVIRKIFFSKCSEVKSKT 519
>Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical
protein C06C3.8 protein.
Length = 513
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -3
Query: 492 LRQTEFVLCSALSSESLFRVLLGHFRNFGILLLTKDLREVEFVQKCVSVSRLPLHCGHIV 313
LR E CS + + + + RN + + D+ + VQ C+ SRLP + H
Sbjct: 372 LRVRESAECSDMIKDDKNLINIDDERNMKLDHVRTDISDTSIVQTCMDSSRLPSNDEHPG 431
Query: 312 AISTGPLHH 286
A T +HH
Sbjct: 432 AKPT-LIHH 439
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 619 RGARGKWRKCGATCIS 666
R ARGKW CG TC++
Sbjct: 231 RIARGKWLNCGQTCLA 246
>U38377-1|AAA79747.2| 283|Caenorhabditis elegans Sox (mammalian sry
box) familyprotein 2, isoform a protein.
Length = 283
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/68 (20%), Positives = 28/68 (41%)
Frame = +2
Query: 392 VRRRMPKFRKWPKSTRKRLSLDKAEQSTNSVCRRTRPILYIWKKTERHDIFANKARLEKK 571
V+R M F W + RK+++L+ + + + +R + + E+ RL
Sbjct: 60 VKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAI 119
Query: 572 KYTLHPGH 595
HP +
Sbjct: 120 HMKEHPDY 127
>Z50044-3|CAA90355.1| 389|Caenorhabditis elegans Hypothetical
protein F22B5.3 protein.
Length = 389
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 387 LWSEEECRNFENGLKAHGKDFHLIRQNKVRTRSV 488
L+ ++ECRN E G + G + N RTRS+
Sbjct: 58 LFDQQECRNDEGGRQVAGIELPFDTCNVARTRSL 91
>Z70210-5|CAA94155.1| 312|Caenorhabditis elegans Hypothetical
protein K08H2.5 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/85 (25%), Positives = 33/85 (38%)
Frame = +2
Query: 431 STRKRLSLDKAEQSTNSVCRRTRPILYIWKKTERHDIFANKARLEKKKYTLHPGHTDYMD 610
ST L + K S VC+R P KK ++ + K T+H Y+
Sbjct: 96 STLGCLVMTKEGDSLGDVCKRNDP-----KKFSPTNVLKIMLSVGKSLQTIHS--LGYIH 148
Query: 611 RFLEEQEASGGSVVRPASPSPMMDY 685
R + + PASP ++DY
Sbjct: 149 RDIHWNNVLFAKTITPASPCKLIDY 173
>AC199240-1|ABO33278.1| 427|Caenorhabditis elegans Hypothetical
protein 2L52.1 protein.
Length = 427
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 410 KFRKWPKSTRKRLSLDKAEQST 475
K R WPK +KRLS + Q T
Sbjct: 236 KRRNWPKRVKKRLSTQRNNQKT 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,640,358
Number of Sequences: 27780
Number of extensions: 364948
Number of successful extensions: 1190
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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