Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20957
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    30   0.021
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    26   0.26 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   9.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 29.9 bits (64), Expect = 0.021
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -3

Query: 127 ANSGLVQICKMAQVYPHPAPEGCTSASSESAPSDQPIYPDTG 2
           A  GL  + ++  VYP+     C   + E++ SD P +P  G
Sbjct: 178 ARHGLETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 264 HHVEQLLIQRFKGHEKIRDLNRQSEVF 344
           HH    L+  F+G  +I D NR+ E+F
Sbjct: 206 HHWHWHLVYPFEGAREIVDKNRRGEIF 232


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 507 SQKMKVNLRNHYKNKKYKPL 566
           S+K   ++ N Y N KYKPL
Sbjct: 23  SKKTVFDIPNDYLNDKYKPL 42


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -3

Query: 85  YPHP--APEGCTSASSESAPSDQPIYPDTG 2
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -3

Query: 85  YPHP--APEGCTSASSESAPSDQPIYPDTG 2
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 64  YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = +3

Query: 507  SQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRV 677
            SQK+  NLRN   + + K LD   K    +  A T  E +   +  +   +  P ++
Sbjct: 1253 SQKIVPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQPSKKVTVSPSASVPAKI 1309


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 536 PLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQD 634
           P   +  +AF+ K   DP   +GSY  R  D++
Sbjct: 348 PQNAKTQKAFQVKRVPDPSKRKGSYIFRLPDEN 380


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 653 LSDLFPRLDLCFVFSKSLAH 594
           ++DL P  D C     +LAH
Sbjct: 56  ITDLDPSADYCLFLEMTLAH 75


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 ALTNGKVLWPLLEER 177
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 ALTNGKVLWPLLEER 177
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 ALTNGKVLWPLLEER 177
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 133 ALTNGKVLWPLLEER 177
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 522 PSSSGIHNVNTCDSFSYNTDLGQF 451
           P   G+   + C S S+N D+  F
Sbjct: 103 PREPGVAGGDVCSSESFNEDIAVF 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 52   ASSESAPSDQPIYPD 8
            ASS  APS  P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 376 IAPFYLLSLILNTSLCRF 323
           + PFY+++ +  TS C F
Sbjct: 234 LIPFYVVATLGTTSSCTF 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,173
Number of Sequences: 336
Number of extensions: 2843
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)