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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20957
         (711 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892...    99   3e-21
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894...    97   9e-21
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341...    97   9e-21
02_03_0340 + 17946133-17946136,17946207-17946342,17946428-179465...    57   2e-08
06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086...    42   6e-04
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198...    31   0.90 
07_03_1414 - 26403361-26403969                                         31   1.2  
07_03_1422 + 26462871-26463434,26463772-26463897                       29   2.8  
07_03_1413 - 26396426-26396890                                         29   2.8  
02_05_0362 + 28291891-28292263,28292432-28292616                       29   2.8  
02_01_0228 + 1507314-1507566,1507645-1507913,1508010-1508213,150...    29   3.6  
04_04_1159 - 31352922-31353098,31354117-31354267,31354581-313548...    29   4.8  
08_02_0431 + 17053928-17054189,17054296-17054564,17054661-170548...    28   6.4  
07_01_0794 - 6179424-6179714,6179797-6179844,6180189-6180248,618...    28   6.4  
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128...    28   6.4  
02_02_0061 + 6468190-6471046,6471318-6471736                           28   8.4  
01_06_0117 + 26605186-26605443,26605540-26605583,26605659-266057...    28   8.4  
01_01_1202 - 9681836-9683146                                           28   8.4  

>01_07_0018 -
           40488702-40488833,40488928-40489020,40489125-40489253,
           40489379-40489500,40490292-40490544,40490636-40490638
          Length = 243

 Score = 99.1 bits (236), Expect = 3e-21
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = -1

Query: 183 VNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTL 4
           VNPLFEKRPK F IG  + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TL
Sbjct: 22  VNPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTL 81

Query: 3   D 1
           D
Sbjct: 82  D 82


>09_04_0677 -
           19388888-19389019,19389124-19389216,19389317-19389445,
           19389559-19389728,19390280-19390481,19390576-19390623,
           19390797-19390799
          Length = 258

 Score = 97.5 bits (232), Expect = 9e-21
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = -1

Query: 186 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 7
           + NPLFEKRPK F IG  + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+T
Sbjct: 20  VTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRT 79

Query: 6   LD 1
           LD
Sbjct: 80  LD 81


>08_02_0211 -
           14333553-14333684,14333795-14333887,14334019-14334105,
           14334220-14334389,14334985-14335186,14335604-14335606
          Length = 228

 Score = 97.5 bits (232), Expect = 9e-21
 Identities = 40/62 (64%), Positives = 51/62 (82%)
 Frame = -1

Query: 186 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 7
           + NPLFEKRPK F IG  + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+T
Sbjct: 4   VTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRT 63

Query: 6   LD 1
           LD
Sbjct: 64  LD 65


>02_03_0340 +
           17946133-17946136,17946207-17946342,17946428-17946584,
           17947330-17947458
          Length = 141

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 18/91 (19%)
 Frame = +3

Query: 474 KKSYRTCLHCVSQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKH------------ 617
           + S    L  +SQK +  LR  YK K   PLDLR KKTRA+R+ LTKH            
Sbjct: 51  RTSIARVLTVISQKQRAALREAYKKKSLLPLDLRPKKTRAIRRRLTKHQLCYTCIRLLTF 110

Query: 618 ------EAKIKTRKEIRKKSLFPPRVYAVKA 692
                 +  +KT +E +++  FP R YA+KA
Sbjct: 111 SMVAISQLSLKTEREKKREKYFPMRKYAIKA 141



 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 30/77 (38%), Positives = 43/77 (55%)
 Frame = +1

Query: 325 IGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 504
           + ++K  ELR K+               + LRVAKVTGG  +KLSKI+VVR +IARV  V
Sbjct: 1   MARIKVDELRGKNKAELQAQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRTSIARVLTV 60

Query: 505 YPRR*RSILETTTKTRN 555
             ++ R+ L    K ++
Sbjct: 61  ISQKQRAALREAYKKKS 77


>06_03_1515 -
           30707600-30707613,30708093-30708167,30708596-30708647,
           30708751-30708831,30709145-30709219,30709870-30709977,
           30710026-30710032,30710133-30710268,30710361-30710685
          Length = 290

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = +3

Query: 513 KMKVNLRNHYKNKKYK--PLDLRAKKTRAMRKALTKHEAKI 629
           K++  LR  YK KK    PLDLR KKT A+R+ LTKH+  +
Sbjct: 155 KVRTALREAYKKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195



 Score = 31.9 bits (69), Expect = 0.52
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +1

Query: 325 IGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVY 498
           + ++K   LR ++               + LRVA+VTGG  +KLS I+ VR A+   Y
Sbjct: 108 MARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALREAY 164


>06_03_0392 +
           20318728-20319309,20319596-20319725,20319844-20319895,
           20319995-20320061,20320547-20320633,20322526-20322567,
           20322635-20322740,20323155-20323219,20323299-20323343,
           20323442-20323549,20323636-20323723,20324147-20324193,
           20324355-20324363
          Length = 475

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 82  PHPAPEGCTSASSESAPSDQP 20
           P PAPE   +A+ E+APSD P
Sbjct: 53  PQPAPEEAPAAAEEAAPSDDP 73


>07_03_1414 - 26403361-26403969
          Length = 202

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +1

Query: 70  ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 210
           AL A +  P +  G++  + + +T G+ L P LEE +    GL L+D
Sbjct: 76  ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122


>07_03_1422 + 26462871-26463434,26463772-26463897
          Length = 229

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 70  ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 210
           AL   +  P Y  G+V  + + +T G+ L P LEE      GL L D
Sbjct: 74  ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120


>07_03_1413 - 26396426-26396890
          Length = 154

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 70  ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 210
           AL   +  P Y  G+V  + + +T G+ L P LEE      GL L D
Sbjct: 28  ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74


>02_05_0362 + 28291891-28292263,28292432-28292616
          Length = 185

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/59 (30%), Positives = 25/59 (42%)
 Frame = +3

Query: 474 KKSYRTCLHCVSQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIR 650
           K  YR+ L   S   K       KNKK K    + KK       +TKH  +I + + +R
Sbjct: 14  KNRYRSQLTSFSGPSKKYCSLSVKNKKKKKKKKKKKKKCCSTAEITKHSVRILSHRTVR 72


>02_01_0228 +
           1507314-1507566,1507645-1507913,1508010-1508213,
           1508323-1508415,1508509-1508604,1508688-1509032,
           1509123-1509191,1509284-1509367,1509455-1509520,
           1509735-1509800,1509934-1509999,1510097-1510162,
           1510280-1510327,1510406-1510468,1510554-1510619,
           1510782-1510841,1511185-1511232,1511315-1511605
          Length = 750

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +3

Query: 522 VNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAK--IKTRKEIRKKSLFPPRVYAVKA 692
           + L NH+ N+K K +  + KK    +KA+     K   +TR+E+R+K   P + Y  +A
Sbjct: 230 IALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQKD--PAKKYPHRA 286


>04_04_1159 -
           31352922-31353098,31354117-31354267,31354581-31354812,
           31354902-31355112,31355791-31355909,31355994-31356176,
           31356283-31356481,31356636-31357015,31357127-31357191,
           31357925-31357990,31358427-31358501,31358781-31358852,
           31359318-31359386,31359476-31359547,31359658-31359729,
           31360126-31360230,31360282-31360353,31361053-31361230,
           31361707-31361791
          Length = 860

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +1

Query: 61  SLLALDADILGPSYKSGQVPSWLNALTNGKVLWPL---LEERIHDLLG-LNLFDHQWGGG 228
           SL  L+   +  +  SG++PS L+ LT  K+LW        +I D +G  NL D ++ G 
Sbjct: 164 SLFKLEELFIDSAGLSGELPSSLSKLTRMKILWASDNNFTGQIPDYIGSWNLTDLRFQGN 223

Query: 229 YF 234
            F
Sbjct: 224 SF 225


>08_02_0431 +
           17053928-17054189,17054296-17054564,17054661-17054864,
           17054974-17055066,17055160-17055255,17055339-17055683,
           17055935-17056018,17056106-17056171,17056268-17056333,
           17056436-17056501,17056635-17056700,17056798-17056863,
           17056981-17057028,17057107-17057169,17057255-17057320,
           17057483-17057542,17057888-17057935,17058019-17058255,
           17058346-17058366
          Length = 741

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 522 VNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAK--IKTRKEIRKK 656
           + L NH+ N+K K +  + KK    +KA+     K   +TR+E+R+K
Sbjct: 233 IALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQK 279


>07_01_0794 -
           6179424-6179714,6179797-6179844,6180189-6180248,
           6180411-6180476,6180562-6180624,6180703-6180750,
           6180868-6180933,6181031-6181096,6181230-6181295,
           6181510-6181575,6181663-6181746,6181839-6181907,
           6181998-6182342,6182426-6182521,6182615-6182707,
           6182817-6183020,6183117-6183385,6183492-6183753
          Length = 753

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 522 VNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAK--IKTRKEIRKK 656
           + L NH+ N+K K +  + KK    +KA+     K   +TR+E+R+K
Sbjct: 233 IALVNHWMNEKSKRISEQNKKNCQKKKAIHTAGTKSFARTREEMRQK 279


>02_04_0587 +
           24110333-24110584,24111193-24111261,24112347-24112850,
           24113094-24113336
          Length = 355

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 135 PDQWQSSLASSRREDSRSSWAQPF*PPMGRR 227
           P    SSLA +RR  +R   AQP  PP  RR
Sbjct: 24  PSSAASSLAFARRAAARPLRAQPLLPPAARR 54


>02_02_0061 + 6468190-6471046,6471318-6471736
          Length = 1091

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +1

Query: 61  SLLALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEE 174
           SL  L A +LG +  +G +PS++ +L N K L  +LEE
Sbjct: 111 SLQNLQALVLGENRLTGSIPSFIGSLANLKFL--ILEE 146


>01_06_0117 +
           26605186-26605443,26605540-26605583,26605659-26605737,
           26605822-26605944,26606300-26606482,26606562-26606648,
           26608149-26608255,26608387-26608474,26608805-26608885,
           26608983-26609059,26609183-26609318,26609548-26609610,
           26609983-26610563,26610816-26610933
          Length = 674

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 190 LGLNLFDHQWGGGYFLPYLLLS 255
           +GL + D QWG G+ L  LLL+
Sbjct: 347 IGLQMLDRQWGAGWNLLALLLA 368


>01_01_1202 - 9681836-9683146
          Length = 436

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -3

Query: 184 RESSLREEAKELCHWSGHSANSGLVQICKMAQVYPHPAPEGCTSASSESAPSDQP 20
           RE +L  EA      SGHS+N G      + Q+  H   E     S+ SA +  P
Sbjct: 272 RERNLEREAPMAVSVSGHSSNQGGSSQHAVIQIEQHEEGETVPLVSAASANNAAP 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,346,549
Number of Sequences: 37544
Number of extensions: 326051
Number of successful extensions: 1156
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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