Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20957
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   119   5e-27
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   119   5e-27
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   119   5e-27
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   119   5e-27
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   119   5e-27
AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...    87   2e-17
AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...    87   2e-17
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...    87   2e-17
BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p pro...    31   2.0  

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  119 bits (286), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -1

Query: 186 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 7
           +VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32  VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91

Query: 6   LD 1
           LD
Sbjct: 92  LD 93


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  119 bits (286), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -1

Query: 186 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 7
           +VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32  VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91

Query: 6   LD 1
           LD
Sbjct: 92  LD 93


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  119 bits (286), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -1

Query: 186 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 7
           +VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32  VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91

Query: 6   LD 1
           LD
Sbjct: 92  LD 93


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  119 bits (286), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -1

Query: 186 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 7
           +VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32  VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91

Query: 6   LD 1
           LD
Sbjct: 92  LD 93


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  119 bits (286), Expect = 5e-27
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -1

Query: 186 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 7
           +VN LFEKRPKNF IGQ +QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QT
Sbjct: 32  VVNQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQT 91

Query: 6   LD 1
           LD
Sbjct: 92  LD 93


>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = +3

Query: 510 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 689
           QK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVK
Sbjct: 63  QKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVK 122

Query: 690 A 692
           A
Sbjct: 123 A 123



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 40/74 (54%), Positives = 45/74 (60%)
 Frame = +1

Query: 331 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYP 510
           KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV  
Sbjct: 3   KVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIVMH 62

Query: 511 RR*RSILETTTKTR 552
           ++ +  L    K +
Sbjct: 63  QKQKENLRKVFKNK 76


>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = +3

Query: 510 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 689
           QK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVK
Sbjct: 63  QKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVK 122

Query: 690 A 692
           A
Sbjct: 123 A 123



 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 40/74 (54%), Positives = 45/74 (60%)
 Frame = +1

Query: 331 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYP 510
           KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV  
Sbjct: 3   KVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMH 62

Query: 511 RR*RSILETTTKTR 552
           ++ +  L    K +
Sbjct: 63  QKQKENLRKVFKNK 76


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = +3

Query: 510 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 689
           QK K NLR  +KNKKYKPLDLR KKTRA+RKAL+  +A  KT KEIRK+S+FP R +AVK
Sbjct: 63  QKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFAVK 122

Query: 690 A 692
           A
Sbjct: 123 A 123



 Score = 70.9 bits (166), Expect = 2e-12
 Identities = 40/74 (54%), Positives = 45/74 (60%)
 Frame = +1

Query: 331 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYP 510
           KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV  
Sbjct: 3   KVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIVMH 62

Query: 511 RR*RSILETTTKTR 552
           ++ +  L    K +
Sbjct: 63  QKQKENLRKVFKNK 76


>BT030434-1|ABO52854.1|  492|Drosophila melanogaster IP18315p
           protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 698 YSSFNGIDSRWEERFLSDLFPRLDLCFV 615
           Y++F   + +W +  + D+F RL LCFV
Sbjct: 46  YTTFFDDNIQWSQMVIKDIFQRLQLCFV 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,483,694
Number of Sequences: 53049
Number of extensions: 536496
Number of successful extensions: 1806
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)