Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20956
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9I7K0 Cluster: CG31363-PE, isoform E; n=12; Diptera|Re...    44   0.004
UniRef50_Q8IGC9 Cluster: RH53211p; n=1; Drosophila melanogaster|...    44   0.004
UniRef50_Q16G84 Cluster: Putative uncharacterized protein; n=1; ...    44   0.004
UniRef50_UPI00015B584C Cluster: PREDICTED: hypothetical protein;...    42   0.014
UniRef50_A2I480 Cluster: Putative uncharacterized protein; n=1; ...    42   0.019
UniRef50_Q9I7K1 Cluster: CG31363-PB, isoform B; n=1; Drosophila ...    40   0.044
UniRef50_UPI0000D56A4D Cluster: PREDICTED: hypothetical protein;...    39   0.13 
UniRef50_Q11VF9 Cluster: CHU large protein; endoglucanase-relate...    34   3.8  
UniRef50_A6QX45 Cluster: Putative uncharacterized protein; n=3; ...    34   3.8  
UniRef50_UPI0000519CF2 Cluster: PREDICTED: similar to CG1943-PA,...    33   6.6  
UniRef50_Q0JAL6 Cluster: Os04g0590600 protein; n=1; Oryza sativa...    33   6.6  
UniRef50_A0IM58 Cluster: Fimbrial biogenesis outer membrane ushe...    33   8.8  
UniRef50_Q4PBB5 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_Q9I7K0 Cluster: CG31363-PE, isoform E; n=12; Diptera|Rep:
           CG31363-PE, isoform E - Drosophila melanogaster (Fruit
           fly)
          Length = 208

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +1

Query: 97  MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPK--KNGMA 243
           MA YA FKHVELY +G  K RV   P    ++IF  +M   +P+  KN MA
Sbjct: 1   MAAYAAFKHVELYNVGKAKKRVLRPPGGGSSDIFGSEMPQ-TPRNVKNRMA 50



 Score = 40.3 bits (90), Expect = 0.044
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612
           S NG + +I  NR+PPGGYSSGLW
Sbjct: 185 SSNGGTPVINKNRIPPGGYSSGLW 208


>UniRef50_Q8IGC9 Cluster: RH53211p; n=1; Drosophila
           melanogaster|Rep: RH53211p - Drosophila melanogaster
           (Fruit fly)
          Length = 160

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +1

Query: 97  MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPK--KNGMA 243
           MA YA FKHVELY +G  K RV   P    ++IF  +M   +P+  KN MA
Sbjct: 83  MAAYAAFKHVELYNVGKAKKRVLRPPGGGSSDIFGSEMPQ-TPRNVKNRMA 132


>UniRef50_Q16G84 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 167

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = +1

Query: 532 TMTSINGTSNIIYYNRVPPGGYSSGLW 612
           T+ S+NG  ++I  NR+PPGG+SSGLW
Sbjct: 141 TVPSLNGAGHVINKNRIPPGGFSSGLW 167


>UniRef50_UPI00015B584C Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 144

 Score = 41.9 bits (94), Expect = 0.014
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = +1

Query: 97  MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPKK 231
           MATYA ++HVEL  +G+GK RV   P    ++IF       SP++
Sbjct: 1   MATYAAYRHVELDNVGYGKKRVLKPPGGGSSDIFGAGGEVNSPRR 45



 Score = 34.3 bits (75), Expect = 2.9
 Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +1

Query: 529 NTMTSINGTSNIIYY-NRVPPGGYSSGLW 612
           +T +S +  SN+    NRVPPGG+SSGLW
Sbjct: 116 STDSSPSANSNVPRMKNRVPPGGFSSGLW 144


>UniRef50_A2I480 Cluster: Putative uncharacterized protein; n=1;
           Maconellicoccus hirsutus|Rep: Putative uncharacterized
           protein - Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 152

 Score = 41.5 bits (93), Expect = 0.019
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +1

Query: 97  MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGD-MTDGSP---KKNGMA 243
           MATYA ++H+EL K+G GK RV   P    ++IF  D   D  P   KK+G +
Sbjct: 1   MATYAAYRHIELDKVGAGKKRVLKPPGGGSSDIFGKDGSNDEKPVIRKKSGQS 53


>UniRef50_Q9I7K1 Cluster: CG31363-PB, isoform B; n=1; Drosophila
           melanogaster|Rep: CG31363-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 185

 Score = 40.3 bits (90), Expect = 0.044
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612
           S NG + +I  NR+PPGGYSSGLW
Sbjct: 162 SSNGGTPVINKNRIPPGGYSSGLW 185


>UniRef50_UPI0000D56A4D Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 162

 Score = 38.7 bits (86), Expect = 0.13
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = +1

Query: 97  MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFN 201
           MATYA ++H+EL K+G+ K RV N P S   EIFN
Sbjct: 1   MATYAAYRHIELDKVGYSKKRVRN-PSS---EIFN 31


>UniRef50_Q11VF9 Cluster: CHU large protein; endoglucanase-related
           protein, glucosyl hydrolase family 9 protein; n=2;
           Cytophaga hutchinsonii ATCC 33406|Rep: CHU large
           protein; endoglucanase-related protein, glucosyl
           hydrolase family 9 protein - Cytophaga hutchinsonii
           (strain ATCC 33406 / NCIMB 9469)
          Length = 2042

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +3

Query: 297 LFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAY 440
           L G  ++ G ++ ++T     N+Q GD + NGG+ T  P +    +A+
Sbjct: 332 LLGNTSAKGVLNTIVTSNYLGNVQ-GDGQFNGGNTTWGPTRYNANTAF 378


>UniRef50_A6QX45 Cluster: Putative uncharacterized protein; n=3;
           Eurotiomycetidae|Rep: Putative uncharacterized protein -
           Ajellomyces capsulatus NAm1
          Length = 232

 Score = 33.9 bits (74), Expect = 3.8
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 393 GSPTHSPAKMMNGSAYSTPSRGEREPAEH*GNPITGDDTVDERANE 530
           G+PT   A+ ++G  Y   +RG +   EH   PI G  T++ERA +
Sbjct: 47  GTPTDVSARYLSGRNYDPEARGPKLGFEH--APIEGQSTLEERAQK 90


>UniRef50_UPI0000519CF2 Cluster: PREDICTED: similar to CG1943-PA,
           isoform A isoform 2; n=1; Apis mellifera|Rep: PREDICTED:
           similar to CG1943-PA, isoform A isoform 2 - Apis
           mellifera
          Length = 133

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = +1

Query: 505 IQSMNGQMNTMTSINGTS---NIIYYNRVPPGGYSSGLW 612
           +Q+     N+    N TS    +    RVPPGGYSSGLW
Sbjct: 95  VQNGTTSSNSSEKSNDTSPAAKVPARTRVPPGGYSSGLW 133


>UniRef50_Q0JAL6 Cluster: Os04g0590600 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os04g0590600 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 184

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -3

Query: 318 CSLPVRKVSSECHADVSVCRGHALARHAVL---LGAAIRHI 205
           C++PV ++ + CHA V V  G  LAR   L    G+ +RH+
Sbjct: 96  CAVPVEQLVAACHACVDVAVGPGLARARTLQVSSGSCVRHV 136


>UniRef50_A0IM58 Cluster: Fimbrial biogenesis outer membrane usher
           protein precursor; n=2; Enterobacteriaceae|Rep: Fimbrial
           biogenesis outer membrane usher protein precursor -
           Serratia proteamaculans 568
          Length = 836

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 472 PNTKATLSPVTIQSMNGQMNTMTSINGTSNIIYYNRVPPGGYS 600
           PN++   SPV +  +  Q N +  +  + N+IY   VPPG +S
Sbjct: 259 PNSQQGFSPV-VHGV-AQTNALVKVMQSGNVIYQENVPPGAFS 299


>UniRef50_Q4PBB5 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 761

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
 Frame = +3

Query: 294 RLFGQAASNGPVSPLITDTIRSNIQFGDSEMNGGSPTHSPAKMMNGSAYST-PSRGEREP 470
           +L GQ++S+  + P   D+     +F   + +G    H PA   +GS ++    RG   P
Sbjct: 36  QLRGQSSSSTLIQPASADSPHFRTKFIQEQQHGDYWEH-PALQPSGSTFTNMDKRGSTSP 94

Query: 471 AEH*GNPITGDDTVDERANEHNDVN*WHQQYYLLQPRAARRLFIWTLV-DYSLTTTLSIP 647
           A      +  D +   R+          Q+Y LL  +  + L  WTL+  +++T  L+  
Sbjct: 95  APFAPEEVHEDVSAVVRSQL--------QEYGLLDAQGRKTLKFWTLILAFAVTVMLTAL 146

Query: 648 TMT 656
            MT
Sbjct: 147 DMT 149


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,410,152
Number of Sequences: 1657284
Number of extensions: 14306160
Number of successful extensions: 39421
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 37962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39388
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)