BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20956 (692 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT006004-1|AAO74687.1| 197|Drosophila melanogaster RE65180p pro... 44 2e-04 BT001843-1|AAN71604.1| 160|Drosophila melanogaster RH53211p pro... 44 2e-04 AE014297-1332|AAG22143.2| 208|Drosophila melanogaster CG31363-P... 44 2e-04 AE014297-1331|AAF54662.3| 197|Drosophila melanogaster CG31363-P... 44 2e-04 BT001513-1|AAN71268.2| 202|Drosophila melanogaster LD43690p pro... 40 0.002 BT001398-1|AAN71153.1| 201|Drosophila melanogaster GH06373p pro... 40 0.002 AY069089-1|AAL39234.1| 185|Drosophila melanogaster GH10365p pro... 40 0.002 AE014297-1333|AAG22142.2| 185|Drosophila melanogaster CG31363-P... 40 0.002 AE014297-1330|AAN13516.1| 202|Drosophila melanogaster CG31363-P... 40 0.002 AE014297-1329|AAF54661.3| 197|Drosophila melanogaster CG31363-P... 40 0.002 AE014297-1328|AAN13515.1| 191|Drosophila melanogaster CG31363-P... 40 0.002 X14569-1|CAA32707.1| 490|Drosophila melanogaster protein ( Dros... 30 3.4 X12506-1|CAA31024.1| 490|Drosophila melanogaster twist protein ... 30 3.4 BT025192-1|ABF17883.1| 490|Drosophila melanogaster FI01303p pro... 30 3.4 AY118454-1|AAM49823.1| 489|Drosophila melanogaster AT17310p pro... 30 3.4 AY075213-1|AAL68080.1| 489|Drosophila melanogaster AT15089p pro... 30 3.4 AE013599-3525|ABC66041.1| 490|Drosophila melanogaster CG2956-PB... 30 3.4 AE013599-3524|AAF46941.1| 490|Drosophila melanogaster CG2956-PA... 30 3.4 BT015211-1|AAT94440.1| 1049|Drosophila melanogaster RE48574p pro... 29 4.5 AF006601-1|AAB62567.1| 882|Drosophila melanogaster Knockout pro... 29 4.5 AE014296-3466|AAF51676.1| 1049|Drosophila melanogaster CG10573-P... 29 4.5 >BT006004-1|AAO74687.1| 197|Drosophila melanogaster RE65180p protein. Length = 197 Score = 44.0 bits (99), Expect = 2e-04 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = +1 Query: 97 MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPK--KNGMA 243 MA YA FKHVELY +G K RV P ++IF +M +P+ KN MA Sbjct: 1 MAAYAAFKHVELYNVGKAKKRVLRPPGGGSSDIFGSEMPQ-TPRNVKNRMA 50 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 174 SSNGGTPVINKNRIPPGGYSSGLW 197 >BT001843-1|AAN71604.1| 160|Drosophila melanogaster RH53211p protein. Length = 160 Score = 44.0 bits (99), Expect = 2e-04 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = +1 Query: 97 MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPK--KNGMA 243 MA YA FKHVELY +G K RV P ++IF +M +P+ KN MA Sbjct: 83 MAAYAAFKHVELYNVGKAKKRVLRPPGGGSSDIFGSEMPQ-TPRNVKNRMA 132 >AE014297-1332|AAG22143.2| 208|Drosophila melanogaster CG31363-PE, isoform E protein. Length = 208 Score = 44.0 bits (99), Expect = 2e-04 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = +1 Query: 97 MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPK--KNGMA 243 MA YA FKHVELY +G K RV P ++IF +M +P+ KN MA Sbjct: 1 MAAYAAFKHVELYNVGKAKKRVLRPPGGGSSDIFGSEMPQ-TPRNVKNRMA 50 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 185 SSNGGTPVINKNRIPPGGYSSGLW 208 >AE014297-1331|AAF54662.3| 197|Drosophila melanogaster CG31363-PC, isoform C protein. Length = 197 Score = 44.0 bits (99), Expect = 2e-04 Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%) Frame = +1 Query: 97 MATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPK--KNGMA 243 MA YA FKHVELY +G K RV P ++IF +M +P+ KN MA Sbjct: 1 MAAYAAFKHVELYNVGKAKKRVLRPPGGGSSDIFGSEMPQ-TPRNVKNRMA 50 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 174 SSNGGTPVINKNRIPPGGYSSGLW 197 >BT001513-1|AAN71268.2| 202|Drosophila melanogaster LD43690p protein. Length = 202 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 179 SSNGGTPVINKNRIPPGGYSSGLW 202 >BT001398-1|AAN71153.1| 201|Drosophila melanogaster GH06373p protein. Length = 201 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 178 SSNGGTPVINKNRIPPGGYSSGLW 201 >AY069089-1|AAL39234.1| 185|Drosophila melanogaster GH10365p protein. Length = 185 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 162 SSNGGTPVINKNRIPPGGYSSGLW 185 >AE014297-1333|AAG22142.2| 185|Drosophila melanogaster CG31363-PB, isoform B protein. Length = 185 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 162 SSNGGTPVINKNRIPPGGYSSGLW 185 >AE014297-1330|AAN13516.1| 202|Drosophila melanogaster CG31363-PH, isoform H protein. Length = 202 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 179 SSNGGTPVINKNRIPPGGYSSGLW 202 >AE014297-1329|AAF54661.3| 197|Drosophila melanogaster CG31363-PA, isoform A protein. Length = 197 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 174 SSNGGTPVINKNRIPPGGYSSGLW 197 >AE014297-1328|AAN13515.1| 191|Drosophila melanogaster CG31363-PD, isoform D protein. Length = 191 Score = 40.3 bits (90), Expect = 0.002 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = +1 Query: 541 SINGTSNIIYYNRVPPGGYSSGLW 612 S NG + +I NR+PPGGYSSGLW Sbjct: 168 SSNGGTPVINKNRIPPGGYSSGLW 191 >X14569-1|CAA32707.1| 490|Drosophila melanogaster protein ( Drosophila melanogastertwist mRNA. ). Length = 490 Score = 29.9 bits (64), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 405 HSPAKMMNGSAYSTPSRGEREPAEH 479 + PA +NGSAYS+ R + E A H Sbjct: 277 YEPANSLNGSAYSSSDRDDMEYARH 301 >X12506-1|CAA31024.1| 490|Drosophila melanogaster twist protein protein. Length = 490 Score = 29.9 bits (64), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 405 HSPAKMMNGSAYSTPSRGEREPAEH 479 + PA +NGSAYS+ R + E A H Sbjct: 277 YEPANSLNGSAYSSSDRDDMEYARH 301 >BT025192-1|ABF17883.1| 490|Drosophila melanogaster FI01303p protein. Length = 490 Score = 29.9 bits (64), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 405 HSPAKMMNGSAYSTPSRGEREPAEH 479 + PA +NGSAYS+ R + E A H Sbjct: 277 YEPANSLNGSAYSSSDRDDMEYARH 301 >AY118454-1|AAM49823.1| 489|Drosophila melanogaster AT17310p protein. Length = 489 Score = 29.9 bits (64), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 405 HSPAKMMNGSAYSTPSRGEREPAEH 479 + PA +NGSAYS+ R + E A H Sbjct: 276 YEPANSLNGSAYSSSDRDDMEYARH 300 >AY075213-1|AAL68080.1| 489|Drosophila melanogaster AT15089p protein. Length = 489 Score = 29.9 bits (64), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 405 HSPAKMMNGSAYSTPSRGEREPAEH 479 + PA +NGSAYS+ R + E A H Sbjct: 276 YEPANSLNGSAYSSSDRDDMEYARH 300 >AE013599-3525|ABC66041.1| 490|Drosophila melanogaster CG2956-PB, isoform B protein. Length = 490 Score = 29.9 bits (64), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 405 HSPAKMMNGSAYSTPSRGEREPAEH 479 + PA +NGSAYS+ R + E A H Sbjct: 277 YEPANSLNGSAYSSSDRDDMEYARH 301 >AE013599-3524|AAF46941.1| 490|Drosophila melanogaster CG2956-PA, isoform A protein. Length = 490 Score = 29.9 bits (64), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 405 HSPAKMMNGSAYSTPSRGEREPAEH 479 + PA +NGSAYS+ R + E A H Sbjct: 277 YEPANSLNGSAYSSSDRDDMEYARH 301 >BT015211-1|AAT94440.1| 1049|Drosophila melanogaster RE48574p protein. Length = 1049 Score = 29.5 bits (63), Expect = 4.5 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 100 ATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPKKNGMARQRVSATHRH 273 AT A+ H GHG + P PK+ + + + SP ++ A + +A RH Sbjct: 476 ATTAKTNHSSRLSHGHGGSVTPTPPKTAQKSVIGKHIFESSPSRS--ATLKATAAKRH 531 >AF006601-1|AAB62567.1| 882|Drosophila melanogaster Knockout protein. Length = 882 Score = 29.5 bits (63), Expect = 4.5 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 100 ATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPKKNGMARQRVSATHRH 273 AT A+ H GHG + P PK+ + + + SP ++ A + +A RH Sbjct: 476 ATTAKTNHSSRLSHGHGGSVTPTPPKTAQKSVIGKHIFESSPSRS--ATLKATAAKRH 531 >AE014296-3466|AAF51676.1| 1049|Drosophila melanogaster CG10573-PA protein. Length = 1049 Score = 29.5 bits (63), Expect = 4.5 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 100 ATYAQFKHVELYKIGHGKNRVPNAPKSCIAEIFNGDMTDGSPKKNGMARQRVSATHRH 273 AT A+ H GHG + P PK+ + + + SP ++ A + +A RH Sbjct: 476 ATTAKTNHSSRLSHGHGGSVTPTPPKTAQKSVIGKHIFESSPSRS--ATLKATAAKRH 531 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,973,720 Number of Sequences: 53049 Number of extensions: 695107 Number of successful extensions: 2024 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1945 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2024 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3026039247 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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