Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20955
(722 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 164 7e-41
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 163 1e-40
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 163 2e-40
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 161 5e-40
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 2e-32
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 130 8e-31
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 88 8e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 88 8e-18
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 87 1e-17
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 85 5e-17
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 85 5e-17
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 4e-16
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 79 5e-15
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 74 1e-13
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 68 7e-12
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 58 5e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 1e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 44 9e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 42 4e-04
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.23
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.2
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.9
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 5.0
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 164 bits (398), Expect = 7e-41
Identities = 76/77 (98%), Positives = 76/77 (98%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAESCDCLQGFQLTH
Sbjct: 121 RKEAESCDCLQGFQLTH 137
Score = 136 bits (329), Expect = 2e-32
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 119 bits (286), Expect = 3e-27
Identities = 55/56 (98%), Positives = 56/56 (100%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 203
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKL+T
Sbjct: 204 NEALYDICFRTLKLTT 219
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 163 bits (397), Expect = 1e-40
Identities = 75/77 (97%), Positives = 76/77 (98%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 274 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 333
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAESCDCLQGFQLTH
Sbjct: 334 RKEAESCDCLQGFQLTH 350
Score = 141 bits (342), Expect = 5e-34
Identities = 63/72 (87%), Positives = 66/72 (91%)
Frame = +1
Query: 40 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 219
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 220 NEASGGKYVPRA 255
NEA+GGKYVPRA
Sbjct: 265 NEATGGKYVPRA 276
Score = 119 bits (286), Expect = 3e-27
Identities = 55/56 (98%), Positives = 56/56 (100%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID
Sbjct: 361 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 416
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKL+T
Sbjct: 417 NEALYDICFRTLKLTT 432
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 163 bits (395), Expect = 2e-40
Identities = 74/77 (96%), Positives = 76/77 (98%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
Sbjct: 6 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 65
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAESCDC+QGFQLTH
Sbjct: 66 RKEAESCDCIQGFQLTH 82
Score = 114 bits (274), Expect = 8e-26
Identities = 53/55 (96%), Positives = 54/55 (98%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
TLLI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID
Sbjct: 94 TLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 148
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKL+T
Sbjct: 149 NEALYDICFRTLKLTT 164
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 161 bits (391), Expect = 5e-40
Identities = 72/77 (93%), Positives = 76/77 (98%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAESCDC+QGFQLTH
Sbjct: 121 RKEAESCDCIQGFQLTH 137
Score = 132 bits (320), Expect = 2e-31
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 PRA 255
PR+
Sbjct: 61 PRS 63
Score = 118 bits (285), Expect = 4e-27
Identities = 54/56 (96%), Positives = 56/56 (100%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVENTDETYCID
Sbjct: 148 GTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 203
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKL+T
Sbjct: 204 NEALYDICFRTLKLTT 219
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 136 bits (329), Expect = 2e-32
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVF 341
PR ILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 130 bits (315), Expect = 8e-31
Identities = 57/75 (76%), Positives = 66/75 (88%), Gaps = 1/75 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+
Sbjct: 17 PRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVL 76
Query: 426 RKEAESCDCLQGFQL 470
RKEAE+CDC+QG QL
Sbjct: 77 RKEAENCDCMQGVQL 91
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKV 589
GTL++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 87.8 bits (208), Expect = 8e-18
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRI 122
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 123 RKLADQCTGLQGFLIFH 139
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 496 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRI 555
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 556 RKLADQCTGLQGFLIFH 572
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 244 VPRA 255
VPRA
Sbjct: 495 VPRA 498
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/55 (32%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +D
Sbjct: 151 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 205
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/55 (32%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +D
Sbjct: 584 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 638
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 87.8 bits (208), Expect = 8e-18
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 648 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRI 707
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 708 RKLADQCTGLQGFLIFH 724
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +
Sbjct: 127 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRI 186
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 187 RKLADQCTGLQGFLIFH 203
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
+RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 241 YVPRA 255
+VPRA
Sbjct: 646 HVPRA 650
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 244 VPRA 255
VPRA
Sbjct: 574 VPRA 577
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 244 VPRA 255
VPRA
Sbjct: 126 VPRA 129
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/55 (32%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +D
Sbjct: 736 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 790
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 215 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 269
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 62 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRI 121
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 122 RKLADQCTGLQGFLIFH 138
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/55 (32%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +D
Sbjct: 150 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVD 204
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +
Sbjct: 867 PRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRI 926
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 927 RKLADQCTGLQGFLIFH 943
Score = 84.6 bits (200), Expect = 7e-17
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +
Sbjct: 434 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRL 493
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 494 RKLADGCTGLQGFLIFH 510
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + I GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 244 VPRA 255
VPRA
Sbjct: 433 VPRA 436
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 244 VPRASSSTWSP 276
VPRA + P
Sbjct: 866 VPRAVFADLEP 876
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 955 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 1009
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P +S VVEPYN+ L+ H +E++D + +D
Sbjct: 522 SLLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMVD 576
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 85.4 bits (202), Expect = 4e-17
Identities = 37/77 (48%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +
Sbjct: 63 PRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRL 122
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 123 RKLADGCTGLQGFLIFH 139
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 151 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVD 205
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +
Sbjct: 481 PRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRI 540
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 541 RKLADQCSGLQGFLVFH 557
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +
Sbjct: 48 PRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRL 107
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 108 RKLADQCTGLQGFLIFH 124
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 243
RE V I GQ G Q+G WE+ EHGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 244 VPRA 255
VPRA
Sbjct: 480 VPRA 483
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/54 (31%), Positives = 35/54 (64%)
Frame = +2
Query: 512 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 570 LLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVD 623
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 136 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 190
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 112 IGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRA 255
+G WE+ EHGI P G D + + N +++E GK+VPRA
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRA 50
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 85.0 bits (201), Expect = 5e-17
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
G+LL+SKIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+ D CID
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICID 111
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +3
Query: 345 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 476
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ H
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAH 45
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 85.0 bits (201), Expect = 5e-17
Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRC 122
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 123 RKLADQCTGLQGFLIFH 139
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 151 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 205
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +
Sbjct: 28 PRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRI 87
Query: 426 RKEAESCDCLQGFQLTH 476
RK A+ C LQGF + H
Sbjct: 88 RKLADQCTGLQGFLIFH 104
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/55 (34%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + ++V P+P++S VVEPYN+ LS H +E++D + +D
Sbjct: 116 SLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMVD 170
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 81.8 bits (193), Expect = 5e-16
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +
Sbjct: 974 PRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKI 1033
Query: 426 RKEAESCDCLQGFQLTH 476
RK + C LQGF + H
Sbjct: 1034 RKMTDQCSGLQGFLIFH 1050
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/55 (32%), Positives = 34/55 (61%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+L+ + +Y + ++V P+P +S VVEPYN+ L+ H +E++D T+ +D
Sbjct: 1062 SLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTFMVD 1116
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 78.6 bits (185), Expect = 5e-15
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDE 658
GTL++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E TDE
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETTDE 79
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3
Query: 423 VRKEAESCDCLQGFQLTH 476
+RKEAE CD +QGFQL H
Sbjct: 1 MRKEAEDCDAIQGFQLLH 18
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDIC++TLKL+T
Sbjct: 109 NEALYDICYKTLKLNT 124
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 76.2 bits (179), Expect = 3e-14
Identities = 32/64 (50%), Positives = 44/64 (68%)
Frame = +3
Query: 285 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 464
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 465 QLTH 476
+ H
Sbjct: 73 LIFH 76
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 88 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 142
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 470
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 471 TH 476
H
Sbjct: 63 FH 64
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 76 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 130
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 68.1 bits (159), Expect = 7e-12
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 470
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 471 TH 476
H
Sbjct: 63 FH 64
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/55 (32%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + ++V P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 76 SLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 130
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 431
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 324 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 476
P+ + G+ A NN+A+GHYT G + VD VLD +RK A+ C LQGF + H
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFH 129
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 241 YVPRASSSTWSPAPWTLS 294
+VPRA P LS
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + ++V P+P ++ VVEPYN+ L+ H +E++D + +D
Sbjct: 141 SLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMVD 195
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 240
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 291 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 431
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 324 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 464
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 76 IVHIQAGQCGNQIGAKFWEIISDE 147
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/55 (34%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y R ++V P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 282 SLLMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 336
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYNEASG 234
MRE + I GQ G QIG WE+ EHGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 235 GKYVPRAS 258
GK+ + +
Sbjct: 254 GKHADQCT 261
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 509 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
+LL+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +D
Sbjct: 26 SLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVD 80
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 124 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 225
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 655
GT +++ + ++YPD T +V PS D + PYN+ L++HQL E+ D
Sbjct: 162 GTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHAD 210
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 234 RQVRAPRILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 368
+ ++A +L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +3
Query: 255 ILVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSV 413
+ VD E + S R G GQ R N + G+ G GNN+A G++ G L+
Sbjct: 42 VCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMT 100
Query: 414 LDVVRKEAESCDCLQGFQLTH 476
+D +RKE E CD G + H
Sbjct: 101 MDAMRKEVERCDSFAGTIVMH 121
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 527 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTD 655
+ ++YPD T +V PS D + PYN+ L++HQL E+ D
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHAD 62
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 35.1 bits (77), Expect = 0.058
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 578 SPKVSDTVVEPYNATLSVHQLVENTDETYCID-TRLSTISA 697
S +SD VV+PYN+ L++ +L +N D +D T L+ I+A
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTALNRIAA 251
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -1
Query: 461 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVH 282
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 281 GAGL 270
G+
Sbjct: 264 RCGI 267
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 497 FRXGTLLISKIREEYPDRI-MNTYSVVPS-PKVSDTVVEPYNATLSVHQLVE 646
FR + +SKI EY + + + + V+P PK+ D + +P+ L V QL+E
Sbjct: 17 FRSHVICVSKIILEYKEPMAICSQRVLPDWPKIGDRITQPFLDQLMVSQLLE 68
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 442 DSASFRTTSKTESTSSAPSV*CPLAQL 362
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 379 CPLAQLLPAPDCPKTKLSGRKICP 308
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 518 ISKIREEYPDRIMNTYSVVPSPKVS 592
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 355 APDCPKTKLSGRKICPKGPERTESMVPGSKST 260
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 455 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 288
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,938,025
Number of Sequences: 59808
Number of extensions: 458082
Number of successful extensions: 1433
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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