Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20955
(722 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 156 2e-38
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 156 2e-38
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 156 2e-38
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 155 2e-38
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 154 5e-38
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 154 6e-38
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 153 1e-37
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 153 1e-37
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 152 3e-37
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 83 1e-16
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 83 1e-16
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 83 2e-16
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 83 2e-16
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 83 2e-16
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 83 2e-16
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 81 1e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 63 2e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 62 3e-10
At4g37190.1 68417.m05265 expressed protein 31 1.0
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 1.0
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 29 2.4
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 4.1
At1g32200.2 68414.m03961 glycerol-3-phosphate acyltransferase, c... 28 5.5
At1g32200.1 68414.m03960 glycerol-3-phosphate acyltransferase, c... 28 5.5
At2g38800.1 68415.m04764 calmodulin-binding protein-related cont... 28 7.2
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 7.2
At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to... 27 9.5
At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to... 27 9.5
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 9.5
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 156 bits (378), Expect = 2e-38
Identities = 69/77 (89%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 114 bits (275), Expect = 5e-26
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 99 bits (238), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKL+T
Sbjct: 204 NEALYDICFRTLKLTT 219
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 156 bits (378), Expect = 2e-38
Identities = 69/77 (89%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 117 bits (282), Expect = 7e-27
Identities = 52/63 (82%), Positives = 56/63 (88%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 100 bits (239), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLS 717
+EALYDICFRTLKL+
Sbjct: 204 NEALYDICFRTLKLA 218
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 156 bits (378), Expect = 2e-38
Identities = 69/77 (89%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 115 bits (276), Expect = 4e-26
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 100 bits (239), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKLST
Sbjct: 204 NEALYDICFRTLKLST 219
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 155 bits (377), Expect = 2e-38
Identities = 68/77 (88%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 122 RKEAENCDCLQGFQVCH 138
Score = 119 bits (287), Expect = 2e-27
Identities = 53/64 (82%), Positives = 58/64 (90%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 243
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
Score = 99 bits (238), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 204
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKLST
Sbjct: 205 NEALYDICFRTLKLST 220
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 154 bits (374), Expect = 5e-38
Identities = 67/77 (87%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 62 PRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 121
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 122 RKEAENCDCLQGFQVCH 138
Score = 124 bits (298), Expect = 8e-29
Identities = 53/64 (82%), Positives = 60/64 (93%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 243
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 244 VPRA 255
VPRA
Sbjct: 61 VPRA 64
Score = 99 bits (238), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 204
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKLST
Sbjct: 205 NEALYDICFRTLKLST 220
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 154 bits (373), Expect = 6e-38
Identities = 68/77 (88%), Positives = 75/77 (97%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR IL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 121 bits (291), Expect = 6e-28
Identities = 51/63 (80%), Positives = 58/63 (92%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 99 bits (238), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKL+T
Sbjct: 204 NEALYDICFRTLKLTT 219
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 67/77 (87%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 120 bits (289), Expect = 1e-27
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 99 bits (238), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKL+T
Sbjct: 204 NEALYDICFRTLKLTT 219
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 153 bits (370), Expect = 1e-37
Identities = 67/77 (87%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+CDCLQGFQ+ H
Sbjct: 121 RKEAENCDCLQGFQVCH 137
Score = 120 bits (289), Expect = 1e-27
Identities = 52/63 (82%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 99 bits (238), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLST 720
+EALYDICFRTLKL+T
Sbjct: 204 NEALYDICFRTLKLTT 219
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 152 bits (368), Expect = 3e-37
Identities = 68/77 (88%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR +L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 426 RKEAESCDCLQGFQLTH 476
RKEAE+ DCLQGFQ+ H
Sbjct: 121 RKEAENSDCLQGFQVCH 137
Score = 120 bits (288), Expect = 1e-27
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 246
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 247 PRA 255
PRA
Sbjct: 61 PRA 63
Score = 100 bits (239), Expect = 1e-21
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
GTLLISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +D
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLD 203
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 673 HEALYDICFRTLKLS 717
+EALYDICFRTLKL+
Sbjct: 204 NEALYDICFRTLKLA 218
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD V
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
G+LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +D
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLD 205
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD V
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
G+LL+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +D
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLD 205
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +D
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLD 205
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +D
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLD 205
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +D
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLD 205
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +
Sbjct: 63 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRI 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
G+LL+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +D
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLD 205
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 240
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 425
PR + +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +
Sbjct: 63 PRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERL 122
Query: 426 RKEAESCDCLQGF 464
RK A++C LQGF
Sbjct: 123 RKLADNCTGLQGF 135
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 240
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 241 YVPRA 255
+VPRA
Sbjct: 61 HVPRA 65
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/56 (39%), Positives = 37/56 (66%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCID 673
G+LL+ ++ ++ + +++ PSP+VS VVEPYN+ LS H L+E+TD +D
Sbjct: 150 GSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLD 205
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 419
PR +L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 420 VVRKEAESCDCLQGFQLTH 476
++ +EA+ D L+GF L H
Sbjct: 121 MIDREADGSDSLEGFVLCH 139
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCID-TR 679
G+ L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +D T
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
Query: 680 LSTIS 694
L+ I+
Sbjct: 210 LNRIA 214
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +3
Query: 249 PR-ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLD 419
PR +L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D
Sbjct: 62 PRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMD 120
Query: 420 VVRKEAESCDCLQGFQLTH 476
++ +EA+ D L+GF L H
Sbjct: 121 MIDREADGSDSLEGFVLCH 139
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +1
Query: 70 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 249
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 250 RA 255
RA
Sbjct: 63 RA 64
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 506 GTLLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCID-TR 679
G+ L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +D T
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
Query: 680 LSTIS 694
L I+
Sbjct: 210 LGRIA 214
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 156
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 399 LVDSVLDVVRKEAESCDCLQGF 464
+++SV VVRKEAE+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = -3
Query: 270 PSRRGCAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAAL 97
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S D VA L
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
Query: 96 ------TSLDMYDFPHFVL 58
+ +YD H VL
Sbjct: 64 LKSAKIRNTRIYDADHSVL 82
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 474 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 361
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At1g32200.2 68414.m03961 glycerol-3-phosphate acyltransferase,
chloroplast (ATS1) identical to SP|Q43307|PLSB_ARATH
Glycerol-3-phosphate acyltransferase, chloroplast
precursor (EC 2.3.1.15) (GPAT) (ATS1) {Arabidopsis
thaliana}; contains Pfam profile PF01553:
Acyltransferase
Length = 459
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 229 SGGKYVPRASSSTWSPAPWTLSALD 303
SGG+ P S+ W PAP+ S++D
Sbjct: 322 SGGRDRPNPSTGEWFPAPFDASSVD 346
>At1g32200.1 68414.m03960 glycerol-3-phosphate acyltransferase,
chloroplast (ATS1) identical to SP|Q43307|PLSB_ARATH
Glycerol-3-phosphate acyltransferase, chloroplast
precursor (EC 2.3.1.15) (GPAT) (ATS1) {Arabidopsis
thaliana}; contains Pfam profile PF01553:
Acyltransferase
Length = 459
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 229 SGGKYVPRASSSTWSPAPWTLSALD 303
SGG+ P S+ W PAP+ S++D
Sbjct: 322 SGGRDRPNPSTGEWFPAPFDASSVD 346
>At2g38800.1 68415.m04764 calmodulin-binding protein-related
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 612
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 344 SEDEVVRTEDLSERSRADRVHGAGLQVDEDAR 249
SE+E V+ +DL E+ + +G +VD D++
Sbjct: 221 SEEEFVKMDDLEEKKEFENGNGGSCEVDIDSQ 252
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -3
Query: 237 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 58
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
>At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 305
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 176 MGTLTCSWSASMYTTMKPPAASTCPAHPRRLGARHH 283
MGTL C A + T K P S +HP+ ARH+
Sbjct: 78 MGTLICIMGAMLLTFYKGPELSNPHSHPQ---ARHN 110
>At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 365
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 176 MGTLTCSWSASMYTTMKPPAASTCPAHPRRLGARHH 283
MGTL C A + T K P S +HP+ ARH+
Sbjct: 138 MGTLICIMGAMLLTFYKGPELSNPHSHPQ---ARHN 170
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 73 EIVHIQAGQCGNQIGAKFWEIISD 144
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,188,565
Number of Sequences: 28952
Number of extensions: 309148
Number of successful extensions: 969
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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