Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20954
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    26   0.24 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    26   0.32 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    26   0.32 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.56 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.56 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.1  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
 Frame = -1

Query: 279 ISAGYREIFSHTD--HLDVLSTRFAET---VADHFR-YTSVYTPHKPLSEV 145
           IS GYR I SH D  +LD    R+ ET     D +R + +VY  H+P  ++
Sbjct: 491 ISDGYRVIISHVDAWYLDCGFGRWRETGEAACDPYRPWQTVYN-HRPWQQL 540


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +2

Query: 53  ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 169
           A PYG   +     ++  +  PP+DD   L     +D G CG
Sbjct: 332 AHPYGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCG 373


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = +2

Query: 53  ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 169
           A PYG   +     ++  +  PP+DD   L     +D G CG
Sbjct: 333 AHPYGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCG 374


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 104 TPPEDDPKQLFVAMTSDRGLCGVYTL 181
           TPPEDD + L  +++S   L G+ +L
Sbjct: 668 TPPEDDAESLNQSISSPGALSGLSSL 693


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 104 TPPEDDPKQLFVAMTSDRGLCGVYTL 181
           TPPEDD + L  +++S   L G+ +L
Sbjct: 560 TPPEDDAESLNQSISSPGALSGLSSL 585


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = +2

Query: 53  ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 169
           A PYG   +     ++  +  PP+D    L     +D G CG
Sbjct: 333 AHPYGTTRLMSSFAFDNNDQGPPQDGAGNLISPSINDDGTCG 374


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +1

Query: 373 PQDTSLVPERSFITSSSLWYRTPSPTWPLYTKKSIESASKLTAYDFWTATY 525
           P +  L    +FITS S    T      +Y + +  S   L  Y  W A +
Sbjct: 193 PVEHLLFIANAFITSQSCENATLYSGDEMYFRVAFPSVFTLIDYSLWKACF 243


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 65  GEGAVQFYERAEVTPPEDDPKQLFVAMTSD 154
           GEGA     RA +   ED+  Q+ V M  +
Sbjct: 458 GEGAFGIVRRAFLDLKEDNKTQVAVKMLKE 487


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,959
Number of Sequences: 336
Number of extensions: 3387
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)