BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20954 (669 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821... 73 3e-13 07_03_0571 - 19602755-19603831 34 0.089 05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361 33 0.21 08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899 31 0.63 04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781 29 2.5 05_04_0008 - 17098168-17099097 29 3.3 07_03_0912 + 22544144-22545589 29 4.4 07_03_0515 + 18992296-18993720 29 4.4 12_02_1285 - 27550548-27550709,27551473-27551516,27551588-275516... 28 5.9 08_02_0417 - 16904476-16904662,16904846-16905029,16905150-169058... 28 5.9 03_05_0287 + 22759946-22760836 28 5.9 07_03_0518 + 19007793-19008722 28 7.7 04_04_1631 - 34919197-34919205,34919865-34920204,34920418-349207... 28 7.7 01_06_0868 - 32587618-32587875,32588239-32588318,32588518-325885... 28 7.7 >10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412, 8216712-8216864,8217456-8217569,8217649-8217776, 8219004-8219099,8219479-8219601,8219694-8219810, 8219983-8220104,8220439-8220508 Length = 368 Score = 72.5 bits (170), Expect = 3e-13 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 10/125 (8%) Frame = +3 Query: 324 LPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLAPLH*EVY*ERQQADGI 503 L F D + + E+ + ++++NKF SV+S+ + L EV + ++ + Sbjct: 218 LQQKFTDVIAVLADDILKNVEYDALRVVFNKFHSVISFKPTMTTILSPEVMEKESESGKV 277 Query: 504 RLLDS----------DVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKSAGEMI 653 LDS ++LQ+ TEF + +++ A E ACSE +RM+AMD++S++AGEM+ Sbjct: 278 GDLDSYEIEGGETKSEILQNLTEFQFSCVMYNAALENACSELGARMSAMDSSSRNAGEML 337 Query: 654 DKLTL 668 D+LTL Sbjct: 338 DRLTL 342 Score = 29.5 bits (63), Expect = 2.5 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +2 Query: 107 PPEDDPKQLFVAMTSDRGLCG 169 P D K + VA+TSD+GLCG Sbjct: 112 PSVDVKKNVIVAITSDKGLCG 132 >07_03_0571 - 19602755-19603831 Length = 358 Score = 34.3 bits (75), Expect = 0.089 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%) Frame = +2 Query: 2 KMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTPPED----------DPKQLFVAMT 148 K+V+AAK RA+ + ++RP+ E V+ Y + ED K V +T Sbjct: 59 KLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQTEDIDLPLTRIRPVKKVALVVLT 118 Query: 149 SDRGLCGVYTLVYLK*SAT 205 +RGLCG + LK + T Sbjct: 119 GERGLCGSFNNNVLKKAET 137 >05_04_0285 - 19825106-19826988,19828479-19828529,19830013-19830361 Length = 760 Score = 33.1 bits (72), Expect = 0.21 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -3 Query: 529 WSTSLSRSRMPSACWRSQ*TS*CRGAKSDWAYDTTDLN 416 WS+S S S + WR+ S C DW+ DTT LN Sbjct: 660 WSSSESSSSLSRPDWRTNGPSPCDYTSIDWSLDTTLLN 697 >08_02_0856 - 21928499-21929626,21929728-21929788,21929950-21930899 Length = 712 Score = 31.5 bits (68), Expect = 0.63 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +1 Query: 337 SWTQVSWPLPFSPQDTSLVPERSFITSSSLWYRTPSPTWP 456 SW++ W +P S Q S+ P+ S I ++ LW R PS P Sbjct: 306 SWSRAFWAIPASTQSISM-PQESTIPNNLLW-RKPSKDNP 343 >04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781 Length = 551 Score = 29.5 bits (63), Expect = 2.5 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = +1 Query: 373 PQDTSLVPERSFITSS-SLWYRTPSPTWP 456 P T+L P+R ++ S+ S W P PTWP Sbjct: 518 PTPTTLRPQRMWLASTVSGWDGLPRPTWP 546 >05_04_0008 - 17098168-17099097 Length = 309 Score = 29.1 bits (62), Expect = 3.3 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +1 Query: 364 PFSPQDTSLVPERSFITSSSLWYRTPSPTWPLYTKKSIESASKLTAYDF 510 P ++ L P R+ T SL Y S TW + + + S++ A DF Sbjct: 59 PGEEEEAPLSPSRAKATVPSLEYEMSSVTWGVIQGRKEQLVSRVLALDF 107 >07_03_0912 + 22544144-22545589 Length = 481 Score = 28.7 bits (61), Expect = 4.4 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +1 Query: 421 SLWYRTPSPTWPLYTKKSIES 483 SLW+ P TWPLY ++ + + Sbjct: 367 SLWFGVPMATWPLYGEQHLNA 387 >07_03_0515 + 18992296-18993720 Length = 474 Score = 28.7 bits (61), Expect = 4.4 Identities = 10/30 (33%), Positives = 17/30 (56%) Frame = +1 Query: 412 TSSSLWYRTPSPTWPLYTKKSIESASKLTA 501 T SLW+ P WPLY ++ + + + + A Sbjct: 369 TLESLWFGVPMVPWPLYAEQHLNAFTLVAA 398 >12_02_1285 - 27550548-27550709,27551473-27551516,27551588-27551651, 27551733-27552463,27552754-27552798,27553663-27554167 Length = 516 Score = 28.3 bits (60), Expect = 5.9 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Frame = +3 Query: 243 LCGRKSRGILQRLYGK---HIISVANEIGRLPPTFL-DASQLATAILTSGYEFGSGKI 404 LCG S ++Q L G I A+ +GR P A+ +A A+LT G+ G+I Sbjct: 67 LCGPLSGLLVQPLVGHLSDRIAPAASPLGRRRPFIAAGAASIAAAVLTVGFSADLGRI 124 >08_02_0417 - 16904476-16904662,16904846-16905029,16905150-16905897, 16906003-16906227,16906318-16906485,16906803-16907453 Length = 720 Score = 28.3 bits (60), Expect = 5.9 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = +1 Query: 301 VLLMRLDVSHLLSWTQVSWPLPFSPQDTSLVPERSFITSSSLWYRTPSPT--WPLYTKKS 474 V ++ LDVS++ + + +P SP S V R+ + S RTPSP P+ TK S Sbjct: 511 VEMLSLDVSNVPQ-SAMDGRIP-SPSPQSPVSARTSSATPSPTARTPSPAPPSPIATKTS 568 Query: 475 IESASKLTAYDFWTATYSNPTRSS 546 L A + S+P R++ Sbjct: 569 TSVVLSLAAVRATSPATSSPPRAT 592 >03_05_0287 + 22759946-22760836 Length = 296 Score = 28.3 bits (60), Expect = 5.9 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +2 Query: 29 RAERDLKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGV 172 R+ DLK P+ G + ERA + ++DP +FV D G+ V Sbjct: 223 RSVIDLKPVLPWPIGKPKGKERACLAVVDEDPDVIFVGTEEDDGVFAV 270 >07_03_0518 + 19007793-19008722 Length = 309 Score = 27.9 bits (59), Expect = 7.7 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +1 Query: 412 TSSSLWYRTPSPTWPLYTKKSIES 483 T SLW+ P WPLY ++ + + Sbjct: 202 TLESLWHGVPMAPWPLYAEQHLNA 225 >04_04_1631 - 34919197-34919205,34919865-34920204,34920418-34920726, 34920781-34921307,34921700-34921852,34922102-34922186, 34922360-34922364 Length = 475 Score = 27.9 bits (59), Expect = 7.7 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +1 Query: 505 DFWTATYSNPTRSSRWPRCCSTR*RRALAQS 597 D W+ +Y PT + WP C+ +R A+S Sbjct: 161 DQWSDSYDIPTETLSWPEFCTIVCKRFAAKS 191 >01_06_0868 - 32587618-32587875,32588239-32588318,32588518-32588583, 32589896-32590523 Length = 343 Score = 27.9 bits (59), Expect = 7.7 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = +1 Query: 358 PLPFSPQDTSLVPERSFITSSSLWYRTPSPTWP 456 P +P S P R+ + W R P PTWP Sbjct: 78 PFSLTPSSASASPRRAQPWGRT-WARPPGPTWP 109 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,178,214 Number of Sequences: 37544 Number of extensions: 398413 Number of successful extensions: 1146 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1143 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1691314196 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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