Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20954
(669 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 28 0.31
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 27 0.53
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 27 0.53
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 27 0.53
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 25 2.9
AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450 pr... 24 3.8
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 5.0
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 24 5.0
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 24 5.0
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.0
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.0
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.0
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 24 5.0
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 27.9 bits (59), Expect = 0.31
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 529 NPTRSSRWPRCCSTR*RRALAQSSRPA*PPWTTPQRAPAR 648
+P RWP C S RR ++S+RP P + P P R
Sbjct: 261 SPRSGGRWPSCRSPPARRR-SRSTRPTSWPRSRPTSKPKR 299
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 27.1 bits (57), Expect = 0.53
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 327 PPTFLDASQLATAILTSGYEFGSGKI-IYNKFKSVVSYAQS 446
PP++ D + A + GY FG K+ + K S V ++ S
Sbjct: 3 PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 27.1 bits (57), Expect = 0.53
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 327 PPTFLDASQLATAILTSGYEFGSGKI-IYNKFKSVVSYAQS 446
PP++ D + A + GY FG K+ + K S V ++ S
Sbjct: 3 PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 27.1 bits (57), Expect = 0.53
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 327 PPTFLDASQLATAILTSGYEFGSGKI-IYNKFKSVVSYAQS 446
PP++ D + A + GY FG K+ + K S V ++ S
Sbjct: 3 PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 24.6 bits (51), Expect = 2.9
Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +3
Query: 525 LQSYTEFSLASLLFYALKEGA--CSEQSSRMTAMDNASK 635
L++YT SL S+ F++ + + C++Q+ + + DNA++
Sbjct: 23 LRTYT--SLQSIAFFSTRRSSAHCTQQTRQASCSDNAAQ 59
>AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450
protein.
Length = 505
Score = 24.2 bits (50), Expect = 3.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 92 FHRTVLHLHHRDEQLSGH 39
FH L+++ RD+ LSGH
Sbjct: 103 FHDRGLYVNERDDPLSGH 120
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.8 bits (49), Expect = 5.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 400 FPEPNSYPEVRMAVAN*LASKKVGGRRPISLATLMMCFPYNL 275
+P PN YP++ V L +KV R S T +M Y L
Sbjct: 14 YPTPNGYPQINGEVDAPLDFRKVESLRRNSTDTGIMDQQYCL 55
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 23.8 bits (49), Expect = 5.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 400 FPEPNSYPEVRMAVAN*LASKKVGGRRPISLATLMMCFPYNL 275
+P PN YP++ V L +KV R S T +M Y L
Sbjct: 14 YPTPNGYPQINGEVDAPLDFRKVESLRRNSTDTGIMDQQYCL 55
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 23.8 bits (49), Expect = 5.0
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 400 FPEPNSYPEVRMAVAN*LASKKVGGRRPISLATLMMCFPYNL 275
+P PN YP++ V L +KV R S T +M Y L
Sbjct: 14 YPTPNGYPQINGEVDAPLDFRKVESLRRNSTDTGIMDQQYCL 55
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 3 RWCQLLNTPVLSVT*KLLVPMVKVQYSSMKGLRLHLP 113
RW L + T +P V+ +Y +M+G R +P
Sbjct: 2 RWTWGLLLFFVGQTVAYTIPAVRFEYPTMRGFRASIP 38
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 3 RWCQLLNTPVLSVT*KLLVPMVKVQYSSMKGLRLHLP 113
RW L + T +P V+ +Y +M+G R +P
Sbjct: 2 RWTWGLLLFFVGQTVAYTIPAVRFEYPTMRGFRASIP 38
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 3 RWCQLLNTPVLSVT*KLLVPMVKVQYSSMKGLRLHLP 113
RW L + T +P V+ +Y +M+G R +P
Sbjct: 2 RWTWGLLLFFVGQTVAYTIPAVRFEYPTMRGFRASIP 38
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 23.8 bits (49), Expect = 5.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 298 MMCFPYNLCRIPRDFLPHR 242
MM PY LCR+ R +L HR
Sbjct: 565 MMIPPY-LCRLLRSYLDHR 582
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,614
Number of Sequences: 2352
Number of extensions: 14923
Number of successful extensions: 83
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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