Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20953
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       25   0.71 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   2.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   2.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.7  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.8  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 263 IPEGYTPKYWEYHRHPITRFIARYIHNNPQQDY 361
           IPE    K  +YH   +  F A  ++N+ +++Y
Sbjct: 124 IPESLVIKLVDYHHQLLGHFGATKVYNSMKREY 156


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 364 LIILLWIVVNIASNKSGDWMAVVL 293
           +I++L ++VN+  N   DW  V L
Sbjct: 1   MILVLLVIVNLGLNGLIDWYTVCL 24


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 278 TPKYWEYHRHPITRFIARYIHNNPQQDYE 364
           T + WE    P T      ++  P+Q+YE
Sbjct: 127 TERNWEIREKPYTPPRLPTVYGKPEQNYE 155


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +2

Query: 239 HWAGAMTPIPEGYTPKYWEYHRH 307
           H    M P  + + P+ W +H H
Sbjct: 33  HQGAQMGPEQQMWEPQMWHHHSH 55


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +2

Query: 239 HWAGAMTPIPEGYTPKYWEYHRH 307
           H    M P  + + P+ W +H H
Sbjct: 33  HQGAQMGPEQQMWEPQMWHHHSH 55


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 282 PNTGSTTAIQSPD 320
           P T S++A++SPD
Sbjct: 220 PTTSSSSALESPD 232


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 337 NIASNKSGDWMAVVLPVFGRIS 272
           N ASN SGD  +  L  F R S
Sbjct: 348 NSASNSSGDAQSTSLRPFSRWS 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,746
Number of Sequences: 336
Number of extensions: 4123
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)