Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20953
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070682-1|AAL48153.1|  186|Drosophila melanogaster RH17657p pro...    86   5e-17
AY070637-1|AAL48108.1|  186|Drosophila melanogaster RH02211p pro...    86   5e-17
AE014296-2100|AAF49954.1|  186|Drosophila melanogaster CG9762-PA...    86   5e-17
AE014134-3555|AAN11139.2|  688|Drosophila melanogaster CG31693-P...    29   5.5  

>AY070682-1|AAL48153.1|  186|Drosophila melanogaster RH17657p
           protein.
          Length = 186

 Score = 85.8 bits (203), Expect = 5e-17
 Identities = 34/62 (54%), Positives = 49/62 (79%)
 Frame = +2

Query: 254 MTPIPEGYTPKYWEYHRHPITRFIARYIHNNPQQDYEKFMHFLDEEQQRIKLRALEKEII 433
           +  IPEGY PK+WEY +HPI+RFI+RYI N+ QQ+YEK +H+L EE ++ ++R LE E+ 
Sbjct: 89  LAEIPEGYEPKHWEYEKHPISRFISRYILNSDQQNYEKSLHYLYEENEKAQIRLLEDEVR 148

Query: 434 KK 439
           +K
Sbjct: 149 RK 150



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = +3

Query: 69  QNVTFTTAKTLKGSHGERTMALQPSRWQWHKFKDMLHFYMMVGLIPAGALIFYCNVFIGP 248
           +N      + + G HG   M ++PSR+QW KFKD+LHFY+M+G+IP  AL+ Y N+F+GP
Sbjct: 27  RNALHQQLRRMGGDHGHHQMIIKPSRFQWDKFKDLLHFYVMLGVIPVTALVLYANIFVGP 86

Query: 249 AQ 254
           AQ
Sbjct: 87  AQ 88



 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = +1

Query: 433 QKMAERQDYQAYYYKPMVNKYLRMNRK 513
           +KM+ER DYQAYYY+P V KY R++++
Sbjct: 149 RKMSERNDYQAYYYRPSVAKYHRISKE 175


>AY070637-1|AAL48108.1|  186|Drosophila melanogaster RH02211p
           protein.
          Length = 186

 Score = 85.8 bits (203), Expect = 5e-17
 Identities = 34/62 (54%), Positives = 49/62 (79%)
 Frame = +2

Query: 254 MTPIPEGYTPKYWEYHRHPITRFIARYIHNNPQQDYEKFMHFLDEEQQRIKLRALEKEII 433
           +  IPEGY PK+WEY +HPI+RFI+RYI N+ QQ+YEK +H+L EE ++ ++R LE E+ 
Sbjct: 89  LAEIPEGYEPKHWEYEKHPISRFISRYILNSDQQNYEKSLHYLYEENEKAQIRLLEDEVR 148

Query: 434 KK 439
           +K
Sbjct: 149 RK 150



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = +3

Query: 69  QNVTFTTAKTLKGSHGERTMALQPSRWQWHKFKDMLHFYMMVGLIPAGALIFYCNVFIGP 248
           +N      + + G HG   M ++PSR+QW KFKD+LHFY+M+G+IP  AL+ Y N+F+GP
Sbjct: 27  RNALHQQLRRMGGDHGHHQMIIKPSRFQWDKFKDLLHFYVMLGVIPVTALVLYANIFVGP 86

Query: 249 AQ 254
           AQ
Sbjct: 87  AQ 88



 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = +1

Query: 433 QKMAERQDYQAYYYKPMVNKYLRMNRK 513
           +KM+ER DYQAYYY+P V KY R++++
Sbjct: 149 RKMSERNDYQAYYYRPSVAKYHRISKE 175


>AE014296-2100|AAF49954.1|  186|Drosophila melanogaster CG9762-PA
           protein.
          Length = 186

 Score = 85.8 bits (203), Expect = 5e-17
 Identities = 34/62 (54%), Positives = 49/62 (79%)
 Frame = +2

Query: 254 MTPIPEGYTPKYWEYHRHPITRFIARYIHNNPQQDYEKFMHFLDEEQQRIKLRALEKEII 433
           +  IPEGY PK+WEY +HPI+RFI+RYI N+ QQ+YEK +H+L EE ++ ++R LE E+ 
Sbjct: 89  LAEIPEGYEPKHWEYEKHPISRFISRYILNSDQQNYEKSLHYLYEENEKAQIRLLEDEVR 148

Query: 434 KK 439
           +K
Sbjct: 149 RK 150



 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = +3

Query: 69  QNVTFTTAKTLKGSHGERTMALQPSRWQWHKFKDMLHFYMMVGLIPAGALIFYCNVFIGP 248
           +N      + + G HG   M ++PSR+QW KFKD+LHFY+M+G+IP  AL+ Y N+F+GP
Sbjct: 27  RNALHQQLRRMGGDHGHHQMIIKPSRFQWDKFKDLLHFYVMLGVIPVTALVLYANIFVGP 86

Query: 249 AQ 254
           AQ
Sbjct: 87  AQ 88



 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = +1

Query: 433 QKMAERQDYQAYYYKPMVNKYLRMNRK 513
           +KM+ER DYQAYYY+P V KY R++++
Sbjct: 149 RKMSERNDYQAYYYRPSVAKYHRISKE 175


>AE014134-3555|AAN11139.2|  688|Drosophila melanogaster CG31693-PA,
           isoform A protein.
          Length = 688

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 19/59 (32%), Positives = 25/59 (42%)
 Frame = -1

Query: 305 GGGTPSIWAYILQG*VSLRRPNEYVTVEYKGTGRYQSNHHVKVQHILKFVPLPSGWLQC 129
           GG     W  + Q    +RR N+         G+  S  HVK+ HI+K   L   WL C
Sbjct: 16  GGSRFQAWPNVRQTRSDIRRQND---------GQQSSGRHVKIIHIVKMCILLLLWLGC 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,391,337
Number of Sequences: 53049
Number of extensions: 724331
Number of successful extensions: 1554
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)