Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20953
         (650 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g09740.1 68418.m01128 histone acetyltransferase, putative sim...    31   0.88 
At3g29590.1 68416.m03718 transferase family protein similar to a...    28   6.2  
At1g13910.1 68414.m01632 leucine-rich repeat family protein cont...    28   6.2  
At3g61780.1 68416.m06931 expressed protein ; expression supporte...    27   8.2  

>At5g09740.1 68418.m01128 histone acetyltransferase, putative
           similar to histone acetyltransferase [Homo sapiens]
           gi|8317213|gb|AAF72665
          Length = 445

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 305 HPITRFIARYIHNNPQQDYEKFMHFLD 385
           HP+     R IHN  Q DYE ++H+ +
Sbjct: 76  HPVKVIERRRIHNGGQNDYEYYVHYTE 102


>At3g29590.1 68416.m03718 transferase family protein similar to
           anthocyanin 5-aromatic acyltransferase from Gentiana
           triflora GI:4185599, malonyl CoA:anthocyanin
           5-O-glucoside-6'''-O-malonyltransferase from Perilla
           frutescens GI:17980232, Salvia splendens GI:17980234;
           contains Pfam profile PF02458 transferase family
          Length = 449

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +2

Query: 320 FIARYIHNNPQQDYEKFMHFLDEEQQRIKLR---ALEKEIIKKWLSARTTKP 466
           F+  + HN  +Q+ E   H L     RI ++    LE +++ +W+SA   KP
Sbjct: 173 FLKAWAHNC-KQEQEALPHDLVPSLDRIIVQDPTGLETKLLNRWISASNNKP 223


>At1g13910.1 68414.m01632 leucine-rich repeat family protein
           contains leucine rich-repeat (LRR) domains Pfam:PF00560,
           INTERPRO:IPR001611; contains similarity to Hcr2-0A
           [Lycopersicon esculentum] gi|3894385|gb|AAC78592
          Length = 330

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 324 INLVIGWRWYSQYLGVYPSGIGVIAPAQ*IRYSRI*GHRPV 202
           I  ++GWR    ++G  P G GV+ P   +  S++  +R V
Sbjct: 39  IKKLVGWRLVYSWVGDDPCGDGVLPPWSGVTCSKVGDYRVV 79


>At3g61780.1 68416.m06931 expressed protein ; expression supported
           by MPSS
          Length = 1121

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +2

Query: 248 GAMTPIPEGYTPKY---WEYHRHPITRFIARYIHNNPQQDYEKFMHFLDEEQQRIKLRAL 418
           G +  I E Y  +Y    E+ +    R I  ++ +N     + F H +D+E + + L+ L
Sbjct: 666 GTIAEIAELYRSEYNDELEWMKDEKLRDIVFHVRDNELAGRDPF-HLIDDEDKAMFLQGL 724

Query: 419 EKEIIKK 439
           EK++ K+
Sbjct: 725 EKKVEKE 731


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,970,568
Number of Sequences: 28952
Number of extensions: 336014
Number of successful extensions: 723
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)