Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20952
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 112 2e-25
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 106 1e-23
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 106 1e-23
At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putativ... 101 5e-22
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 98 4e-21
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 96 2e-20
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 96 2e-20
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ... 93 1e-19
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 91 6e-19
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 91 6e-19
At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal hydrolase-r... 30 1.5
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At2g43970.2 68415.m05468 La domain-containing protein contains P... 28 4.7
At2g43970.1 68415.m05467 La domain-containing protein contains P... 28 4.7
At5g19460.1 68418.m02319 MutT/nudix family protein similar to SP... 28 6.1
At1g75660.1 68414.m08789 5'-3' exoribonuclease (XRN3) identical ... 27 8.1
At1g35614.1 68414.m04423 hypothetical protein 27 8.1
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 112 bits (270), Expect = 2e-25
Identities = 57/91 (62%), Positives = 65/91 (71%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK FAG VENTE NR+ YR+LLF+S +SGVILF ETLYQK DG P V LL +
Sbjct: 37 GKRFAGINVENTESNRQAYRELLFTSPGSYP-CLSGVILFEETLYQKTSDGKPFVDLLME 95
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
G+IPGIKVDKG+V L G+ E TTQGLD L
Sbjct: 96 NGVIPGIKVDKGLVDLAGTNGETTTQGLDSL 126
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASIC 644
RC QY + G FAKWR KIG PS +IQE+A VLARYA IC
Sbjct: 129 RCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDARVLARYAIIC 173
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 149 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
++EL K A+ I P +GILAADEST T+GKR I
Sbjct: 9 EDELIKTAKYIATPGRGILAADESTETIGKRFAGI 43
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 106 bits (255), Expect = 1e-23
Identities = 55/91 (60%), Positives = 62/91 (68%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK FA VEN E NR+ R+LLF+S +SGVILF ETLYQK DG P V LL +
Sbjct: 37 GKRFASINVENIESNRQALRELLFTSPGTFP-CLSGVILFEETLYQKTTDGKPFVELLME 95
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
G+IPGIKVDKGVV L G+ E TTQGLD L
Sbjct: 96 NGVIPGIKVDKGVVDLAGTNGETTTQGLDSL 126
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASIC 644
RC +Y K G FAKWR VLKIG PS +IQENA LARYA IC
Sbjct: 129 RCQEYYKAGARFAKWRAVLKIGATEPSELSIQENAKGLARYAIIC 173
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +2
Query: 152 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
+EL K A+ I P KGILAADESTGT+GKR I
Sbjct: 10 DELIKTAKYIATPGKGILAADESTGTIGKRFASI 43
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 106 bits (255), Expect = 1e-23
Identities = 53/91 (58%), Positives = 63/91 (69%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK A VEN E NRR R+LLF++ L +SGVILF ETLYQK+ DGTP V +L+
Sbjct: 37 GKRLASINVENVESNRRALRELLFTTPGALP-CLSGVILFEETLYQKSSDGTPFVDMLKS 95
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
G++PGIKVDKG V L G+ E TTQGLD L
Sbjct: 96 AGVLPGIKVDKGTVELAGTNGETTTQGLDGL 126
Score = 60.9 bits (141), Expect = 7e-10
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASIC 644
RC +Y + G FAKWR VLKIG N PS AI ENA LARYA IC
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGVNEPSQLAIHENAYGLARYAVIC 173
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +2
Query: 137 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
T + +EL A I P KGILAADESTGT+GKRL I
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASI 43
>At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putative
similar to SP|O65735|ALF_CICAR Fructose-bisphosphate
aldolase, cytoplasmic isozyme {Cicer arietinum},
cytosolic aldolase [Fragaria x ananassa] GI:10645188;
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 101 bits (241), Expect = 5e-22
Identities = 51/91 (56%), Positives = 63/91 (69%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK A VEN E NRR R+LLF++ L +SGVILF ETLYQK+ DG V +L++
Sbjct: 37 GKRLASINVENVETNRRNLRELLFTAPGALP-CLSGVILFEETLYQKSSDGKLFVDILKE 95
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
G++PGIKVDKG V L G++ E TTQGLD L
Sbjct: 96 GGVLPGIKVDKGTVELAGTDGETTTQGLDGL 126
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASIC 644
RC +Y + G FAKWR VLKIG N PS +I ENA LARYA IC
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGENEPSEHSIHENAYGLARYAVIC 173
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +2
Query: 137 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
T + +EL A I P KGILAADESTGT+GKRL I
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASI 43
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 98.3 bits (234), Expect = 4e-21
Identities = 51/91 (56%), Positives = 61/91 (67%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK A +ENTE NR+ YR LL S+ L + ISG ILF ETLYQ DG +V +L +
Sbjct: 81 GKRLASIGLENTEANRQAYRTLLVSAPG-LGQYISGAILFEETLYQSTTDGKKMVDVLVE 139
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
+ I+PGIKVDKG+VPL GS DE QGLD L
Sbjct: 140 QNIVPGIKVDKGLVPLVGSYDESWCQGLDGL 170
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASI 641
R A Y + G FAKWR V+ I N PS A++E A LARYA+I
Sbjct: 173 RTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAI 215
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 152 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
+EL K A+ I +P GI+A DES T GKRL I
Sbjct: 54 DELVKTAKTIASPGHGIMAMDESNATCGKRLASI 87
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/91 (52%), Positives = 60/91 (65%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK F VEN E NRR R+LLF++ L + ISG+ILF ETLYQK G V ++++
Sbjct: 37 GKRFVSINVENVESNRRALRELLFTTPGAL-QYISGIILFEETLYQKTASGKLFVDVMKE 95
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 96 AGVLPGIKVDKGTVELAGTNGETTTTGLDGL 126
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASIC 644
RC +Y + G FAKWR VLKIG N PS AI ENA LARYA IC
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGNNEPSELAIHENAYGLARYAVIC 173
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2
Query: 152 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
+EL A I P KGILAADESTGT+GKR I
Sbjct: 10 DELIANAAYIGTPGKGILAADESTGTIGKRFVSI 43
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/91 (52%), Positives = 60/91 (65%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK F VEN E NRR R+LLF++ L + ISG+ILF ETLYQK G V ++++
Sbjct: 71 GKRFVSINVENVESNRRALRELLFTTPGAL-QYISGIILFEETLYQKTASGKLFVDVMKE 129
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 130 AGVLPGIKVDKGTVELAGTNGETTTTGLDGL 160
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/45 (64%), Positives = 31/45 (68%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASIC 644
RC +Y + G FAKWR VLKIG N PS AI ENA LARYA IC
Sbjct: 163 RCKKYYEAGARFAKWRAVLKIGNNEPSELAIHENAYGLARYAVIC 207
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = +2
Query: 155 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
EL A I P KGILAADESTGT+GKR I
Sbjct: 45 ELIANAAYIGTPGKGILAADESTGTIGKRFVSI 77
>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
similar to plastidic aldolase NPALDP1 from Nicotiana
paniculata [GI:4827251]; contains Pfam profile PF00274
Fructose-bisphosphate aldolase class-I
Length = 391
Score = 93.1 bits (221), Expect = 1e-19
Identities = 48/91 (52%), Positives = 58/91 (63%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK A ++NTE+NR+ YRQLL ++ L + ISG ILF ETLYQ DG V L
Sbjct: 73 GKRLASIGLDNTEDNRQAYRQLLLTTPG-LGDYISGSILFEETLYQSTKDGKTFVDCLRD 131
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
I+PGIKVDKG+ PL GS +E QGLD L
Sbjct: 132 ANIVPGIKVDKGLSPLAGSNEESWCQGLDGL 162
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 152 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
+EL K A++I +P +GILA DES T GKRL I
Sbjct: 46 DELVKTAKSIASPGRGILAIDESNATCGKRLASI 79
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASI 641
R A+Y K G FAKWR V+ + PS A++E A LARYA+I
Sbjct: 165 RSAEYYKQGARFAKWRTVVSVPCG-PSALAVKEAAWGLARYAAI 207
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 91.1 bits (216), Expect = 6e-19
Identities = 46/91 (50%), Positives = 60/91 (65%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK +ENTE NR+ +R LL S+ L + +SG ILF ETLYQ +G +V +L +
Sbjct: 80 GKRLDSIGLENTEANRQAFRTLLVSAPG-LGQYVSGAILFEETLYQSTTEGKKMVDVLVE 138
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
+ I+PGIKVDKG+VPL GS +E QGLD L
Sbjct: 139 QNIVPGIKVDKGLVPLVGSNNESWCQGLDGL 169
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASI 641
R A Y + G FAKWR V+ I N PS A++E A LARYA+I
Sbjct: 172 RTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAI 214
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 152 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
+EL K A+ I +P +GILA DES T GKRL I
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSI 86
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 91.1 bits (216), Expect = 6e-19
Identities = 46/91 (50%), Positives = 60/91 (65%)
Frame = +1
Query: 232 GKAFAGHRVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 411
GK +ENTE NR+ +R LL S+ L + +SG ILF ETLYQ +G +V +L +
Sbjct: 80 GKRLDSIGLENTEANRQAFRTLLVSAPG-LGQYVSGAILFEETLYQSTTEGKKMVDVLVE 138
Query: 412 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 504
+ I+PGIKVDKG+VPL GS +E QGLD L
Sbjct: 139 QNIVPGIKVDKGLVPLVGSNNESWCQGLDGL 169
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +3
Query: 510 RCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASI 641
R A Y + G FAKWR V+ I N PS A++E A LARYA+I
Sbjct: 172 RTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAI 214
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 152 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDI 253
+EL K A+ I +P +GILA DES T GKRL I
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSI 86
>At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 268 LCSPRDVLQTLSHCTGGFVSGEDTL 194
LC+ RDVL+ +SH T F + ED L
Sbjct: 560 LCAVRDVLEGISHPTFDFTNAEDCL 584
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = +3
Query: 417 HHPRHQGRQGC----RPAVRIGRRMHHPGSGRPRP 509
HH + GC RP R+ R HHP R RP
Sbjct: 44 HHNQRHDSDGCDPLRRPTPRLRRFFHHPIQERSRP 78
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 405 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 509
G HH H + G +P+ M PG G+ +P
Sbjct: 470 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 504
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 405 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 509
G HH H + G +P+ M PG G+ +P
Sbjct: 486 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 520
>At5g19460.1 68418.m02319 MutT/nudix family protein similar to
SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK)
(Thiamine kinase) {Schizosaccharomyces pombe}; contains
Pfam profile PF00293: NUDIX domain
Length = 374
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 265 TEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGT----PLVSLLEKKGIIPGI 432
TE R + FS + + + G + + L QK +D T ++ +L KGIIPGI
Sbjct: 116 TEYLREFHDIFTFSQNGSCPDRVDGYVTLNLML-QKPEDRTRAVADVIKILGDKGIIPGI 174
Query: 433 K 435
+
Sbjct: 175 R 175
>At1g75660.1 68414.m08789 5'-3' exoribonuclease (XRN3) identical to
XRN3 [Arabidopsis thaliana] gi|11875628|gb|AAG40732
Length = 1020
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 399 PAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPR 512
P G G H QG R G HH G PR R
Sbjct: 982 PRGYNGQHHHQQGGDHDRRGRGRGSHHHHDQGGNPRHR 1019
>At1g35614.1 68414.m04423 hypothetical protein
Length = 113
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 198 VSSPLTNPPVQWESVCRT 251
VSSP N V+WE CRT
Sbjct: 81 VSSPAINEVVKWEGKCRT 98
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,748,913
Number of Sequences: 28952
Number of extensions: 324635
Number of successful extensions: 883
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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