Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20950
(691 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 175 2e-44
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 175 2e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 175 2e-44
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 169 2e-42
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 5e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 93 1e-19
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 67 1e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 67 1e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 5e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 5e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 5e-11
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 61 6e-10
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.005
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.15
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.25
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.25
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.0
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 30 1.4
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.4
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.8
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.8
Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.4
U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 29 4.1
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 29 4.1
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 175 bits (426), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRD 182
TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRD
Sbjct: 38 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRD 97
Query: 183 FIKNMITGTSQADCAVLIVAAGTG 254
FIKNMITGTSQADCAVL+VA GTG
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTG 121
Score = 75.4 bits (177), Expect = 4e-14
Identities = 57/142 (40%), Positives = 70/142 (49%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 436
FEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++ + +
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR-----LFHLS 174
Query: 437 YNPAAVAFVPISGWHGDNMLEPSTKCLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPL 616
+P + L C GSRDG + +K L E S +L PS H A L
Sbjct: 175 QSPDSTE---------TTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQL 225
Query: 617 TSPCVFPCKTYTKSVVLVPCPS 682
T VF + T+S L P S
Sbjct: 226 TDHSVFHSRMCTRSEELEPSQS 247
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 175 bits (426), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRD 182
TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRD
Sbjct: 38 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRD 97
Query: 183 FIKNMITGTSQADCAVLIVAAGTG 254
FIKNMITGTSQADCAVL+VA GTG
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTG 121
Score = 140 bits (340), Expect = 6e-34
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 436
FEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIG
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIG 182
Query: 437 YNPAAVAFVPISGWHGDNMLEPST 508
YNP AV FVPISG++GDNMLE S+
Sbjct: 183 YNPKAVPFVPISGFNGDNMLEVSS 206
Score = 118 bits (284), Expect = 4e-27
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +1
Query: 505 NQMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 684
+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVG
Sbjct: 206 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 265
Query: 685 RV 690
RV
Sbjct: 266 RV 267
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 175 bits (426), Expect = 2e-44
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = +3
Query: 3 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRD 182
TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRD
Sbjct: 38 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRD 97
Query: 183 FIKNMITGTSQADCAVLIVAAGTG 254
FIKNMITGTSQADCAVL+VA GTG
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTG 121
Score = 140 bits (340), Expect = 6e-34
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 436
FEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIG
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIG 182
Query: 437 YNPAAVAFVPISGWHGDNMLEPST 508
YNP AV FVPISG++GDNMLE S+
Sbjct: 183 YNPKAVPFVPISGFNGDNMLEVSS 206
Score = 118 bits (284), Expect = 4e-27
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +1
Query: 505 NQMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 684
+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVG
Sbjct: 206 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 265
Query: 685 RV 690
RV
Sbjct: 266 RV 267
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 169 bits (410), Expect = 2e-42
Identities = 78/86 (90%), Positives = 82/86 (95%)
Frame = +3
Query: 3 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRD 182
TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRD
Sbjct: 38 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRD 97
Query: 183 FIKNMITGTSQADCAVLIVAAGTGNS 260
FIKNMITGTSQADCAVL+VA +S
Sbjct: 98 FIKNMITGTSQADCAVLVVACNKMDS 123
Score = 118 bits (284), Expect = 4e-27
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +1
Query: 505 NQMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 684
+ MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVG
Sbjct: 172 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 231
Query: 685 RV 690
RV
Sbjct: 232 RV 233
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/59 (72%), Positives = 49/59 (83%)
Frame = +2
Query: 332 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 508
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSS 172
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 114 bits (275), Expect = 5e-26
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +3
Query: 3 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRD 182
TI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+D
Sbjct: 201 TIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKD 260
Query: 183 FIKNMITGTSQADCAVLIVAAGTG 254
FI NMITGTSQAD A+L+V A TG
Sbjct: 261 FISNMITGTSQADAAILVVNATTG 284
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/82 (45%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKI 433
FE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++
Sbjct: 286 FETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQA 343
Query: 434 GYNPAAVAFVPISGWHGDNMLE 499
G++ FVP+SG+ G+N+++
Sbjct: 344 GFSKP--KFVPVSGFTGENLIK 363
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 559 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKI 414
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 114 bits (275), Expect = 5e-26
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +3
Query: 3 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRD 182
TI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+D
Sbjct: 219 TIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKD 278
Query: 183 FIKNMITGTSQADCAVLIVAAGTG 254
FI NMITGTSQAD A+L+V A TG
Sbjct: 279 FISNMITGTSQADAAILVVNATTG 302
Score = 74.5 bits (175), Expect = 6e-14
Identities = 37/82 (45%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKI 433
FE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++
Sbjct: 304 FETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQA 361
Query: 434 GYNPAAVAFVPISGWHGDNMLE 499
G++ FVP+SG+ G+N+++
Sbjct: 362 GFSKP--KFVPVSGFTGENLIK 381
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 559 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKI 432
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +3
Query: 3 TIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRD 182
T+EK+E+EA+E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH+
Sbjct: 140 TLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKS 199
Query: 183 FIKNMITGTSQADCAVLIVAAGTG 254
F+ NMI G +QAD AVL+++A G
Sbjct: 200 FVPNMIVGANQADLAVLVISARRG 223
Score = 78.6 bits (185), Expect = 4e-15
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Frame = +2
Query: 239 SCRYR*FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 418
S R FE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++
Sbjct: 219 SARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTP 278
Query: 419 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKCLGSRDGRW 538
+++K+G+NP + +VP SG G + + T GS +G W
Sbjct: 279 FLRKLGFNPKTDITYVPCSGLTGAFIKDRPT---GS-EGNW 315
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 562 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
G C IE +D +LP R + P+R + + Y +GTV +G++
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKY--SEMGTVIIGKM 359
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 249 TG 254
G
Sbjct: 143 DG 144
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 284 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 463
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 514 PWFKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 684
P +G + EG+ D C LI+ALD++ P R +P+ I G GTV VG
Sbjct: 201 PVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVG 259
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 249 TG 254
G
Sbjct: 143 DG 144
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 284 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 463
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 514 PWFKGWQVERKEGKADGKC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVG 684
P +G + EG+ D C LI+ALD++ P R +P+ I G GTV VG
Sbjct: 201 PVIRGSALSALEGQ-DISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVG 259
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 249 TG 254
G
Sbjct: 147 DG 148
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 284 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 439
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 249 TG 254
G
Sbjct: 148 DG 149
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 284 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 439
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 249 TG 254
G
Sbjct: 148 DG 149
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 284 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 439
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +3
Query: 3 TIEKFEKEAQEMGKGSFKYAWVLDKLKAER 92
TIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 38 TIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 66 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 245
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 246 GTG 254
G
Sbjct: 136 NQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 66 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 245
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 246 GTG 254
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 249 TG 254
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 39 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 215
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 216 ADCAVLIVAAGTG 254
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 239
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 239
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 72 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 236
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 237 VAAGTG 254
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 72 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 236
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 237 VAAGTG 254
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 147 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 242
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 150 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAAGTGNSKLVSLRTV 284
V IID+ G RDFI KN+ GT AD +++ AA +S +L T+
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAADDASSLEEALSTL 117
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 105 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 254
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +2
Query: 284 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVA 457
QT EH LLA ++I+ +NK D E + + E K+V +K +G N V
Sbjct: 112 QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVE 167
Query: 458 FVPISGWHGDNMLEPSTKCLGSR 526
G+ + ML+ + SR
Sbjct: 168 MSLADGYFKEEMLQNLKLAIESR 190
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 150 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 254
+ +ID PGH I+ ++ ++ D A++I+ G
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG 108
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 105 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 254
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 156 IIDAPGHRDFIKNMITGTSQADCAVLIV 239
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical
protein T23G4.3 protein.
Length = 485
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 356 DSTEPPYSEP-RFEEIKKEVSSYIKKIGYNPAAVAFV--PISGWHGDNMLEPSTKCLGSR 526
D TE + P +++E++KE+ + + + AA A P+ + L + K + R
Sbjct: 78 DCTEGAEATPEQWKELEKELDKVVAFMKDSEAAKATETDPVKRYKNLCQLSMTLKIMSPR 137
Query: 527 DGRWSVKKAKLTENASLKL 583
DG W + K TE L +
Sbjct: 138 DGGWKILHDKRTEAEQLAI 156
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 414 PHTSRRLATTQLLSLSCPFLD 476
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 414 PHTSRRLATTQLLSLSCPFLD 476
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 414 PHTSRRLATTQLLSLSCPFLD 476
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 414 PHTSRRLATTQLLSLSCPFLD 476
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical
protein M03D4.4b protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = -1
Query: 349 VYSYDELFDTEGESEQGMLTGLTVLRDTSFELPVPAATMS 230
V ++ + + +E +L G + +D FE+P P +S
Sbjct: 236 VKQHENILNNNNNNESNILNGSVMHKDAGFEIPAPTIPLS 275
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = -1
Query: 349 VYSYDELFDTEGESEQGMLTGLTVLRDTSFELPVPAATMS 230
V ++ + + +E +L G + +D FE+P P +S
Sbjct: 285 VKQHENILNNNNNNESNILNGSVMHKDAGFEIPAPTIPLS 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,500,150
Number of Sequences: 27780
Number of extensions: 389227
Number of successful extensions: 1250
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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