Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20950
(691 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 157 9e-39
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 103 1e-22
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 81 7e-16
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 65 5e-11
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 65 5e-11
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 43 2e-04
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 43 2e-04
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 43 2e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 41 9e-04
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 38 0.005
At5g13650.2 68418.m01585 elongation factor family protein contai... 36 0.019
At5g13650.1 68418.m01584 elongation factor family protein contai... 36 0.019
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.025
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.025
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 36 0.033
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.24
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.31
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.31
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.41
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.41
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 0.95
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 0.95
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.7
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.7
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7
At5g34780.1 68418.m04048 dehydrogenase E1 component family prote... 29 2.2
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.2
At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putativ... 29 2.9
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.9
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.1
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 6.7
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 6.7
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 6.7
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 27 8.9
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 27 8.9
At1g01060.2 68414.m00007 myb family transcription factor contain... 27 8.9
At1g01060.1 68414.m00006 myb family transcription factor contain... 27 8.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = +3
Query: 6 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 185
IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDF
Sbjct: 39 IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDF 98
Query: 186 IKNMITGTSQADCAVLIVAAGTG 254
IKNMITGTSQADCAVLI+ + TG
Sbjct: 99 IKNMITGTSQADCAVLIIDSTTG 121
Score = 132 bits (319), Expect = 2e-31
Identities = 61/84 (72%), Positives = 72/84 (85%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 436
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182
Query: 437 YNPAAVAFVPISGWHGDNMLEPST 508
YNP + FVPISG+ GDNM+E ST
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERST 206
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 562 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRV 255
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = +3
Query: 6 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 185
IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDF
Sbjct: 39 IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDF 98
Query: 186 IKNMITGTSQADCAVLIVAAGTG 254
IKNMITGTSQADCAVLI+ + TG
Sbjct: 99 IKNMITGTSQADCAVLIIDSTTG 121
Score = 132 bits (319), Expect = 2e-31
Identities = 61/84 (72%), Positives = 72/84 (85%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 436
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182
Query: 437 YNPAAVAFVPISGWHGDNMLEPST 508
YNP + FVPISG+ GDNM+E ST
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERST 206
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 562 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRV 255
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = +3
Query: 6 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 185
IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDF
Sbjct: 39 IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDF 98
Query: 186 IKNMITGTSQADCAVLIVAAGTG 254
IKNMITGTSQADCAVLI+ + TG
Sbjct: 99 IKNMITGTSQADCAVLIIDSTTG 121
Score = 132 bits (319), Expect = 2e-31
Identities = 61/84 (72%), Positives = 72/84 (85%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 436
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182
Query: 437 YNPAAVAFVPISGWHGDNMLEPST 508
YNP + FVPISG+ GDNM+E ST
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERST 206
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 562 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRV 255
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 157 bits (380), Expect = 9e-39
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = +3
Query: 6 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 185
IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDF
Sbjct: 39 IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDF 98
Query: 186 IKNMITGTSQADCAVLIVAAGTG 254
IKNMITGTSQADCAVLI+ + TG
Sbjct: 99 IKNMITGTSQADCAVLIIDSTTG 121
Score = 132 bits (319), Expect = 2e-31
Identities = 61/84 (72%), Positives = 72/84 (85%)
Frame = +2
Query: 257 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 436
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182
Query: 437 YNPAAVAFVPISGWHGDNMLEPST 508
YNP + FVPISG+ GDNM+E ST
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERST 206
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 562 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
G L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 213 GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRV 255
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 103 bits (246), Expect = 1e-22
Identities = 42/83 (50%), Positives = 62/83 (74%)
Frame = +3
Query: 6 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 185
+ K+EKEA+ GKGSF YAW LD+ ERERGIT+ +A+ F + +++V ++D+PGH+DF
Sbjct: 271 MHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDF 330
Query: 186 IKNMITGTSQADCAVLIVAAGTG 254
+ NMI G +QAD A+L++ A G
Sbjct: 331 VPNMIAGATQADAAILVIDASVG 353
Score = 64.1 bits (149), Expect = 8e-11
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 FEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 433
FEAG GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++
Sbjct: 355 FEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSC 412
Query: 434 GYNPAAVAFVPISGWHGDNML-EPSTKCLGS 523
+ +++ ++P+S N++ PS L S
Sbjct: 413 RFKDSSLTWIPLSAMENQNLVAAPSDNRLSS 443
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 562 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTV 675
G CL++A+D++ P R KPL +P+ D + G V
Sbjct: 447 GPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQV 484
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 81.0 bits (191), Expect = 7e-16
Identities = 35/83 (42%), Positives = 57/83 (68%)
Frame = +3
Query: 6 IEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDF 185
I+K+EKEA++ + S+ A+++D + ER +G T+++ FET TI+DAPGH+ +
Sbjct: 133 IQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSY 192
Query: 186 IKNMITGTSQADCAVLIVAAGTG 254
+ NMI+G SQAD VL+++A G
Sbjct: 193 VPNMISGASQADIGVLVISARKG 215
Score = 79.4 bits (187), Expect = 2e-15
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 239 SCRYR*FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 418
S R FE G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++
Sbjct: 211 SARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVP 270
Query: 419 YIKKIGYNPAA-VAFVPISGWHGDNM 493
++K GYN V F+PISG G NM
Sbjct: 271 FLKASGYNTKKDVVFLPISGLMGKNM 296
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 249 TG 254
G
Sbjct: 177 DG 178
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 571 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
L++A+D +P P R T+ P L ++DV+ I G GTV GRV
Sbjct: 269 LMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRV 309
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 284 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 421
QT+EH LLA +GV ++V +NK D + E E+++ +SSY
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+DK E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 249 TG 254
G
Sbjct: 165 DG 166
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 571 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRV 690
L++A+D +P P R DKP +P++DV+ I G GTV GR+
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRI 289
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2
Query: 284 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 463
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G + +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGS 229
Query: 464 PISGWHGDN 490
+S G N
Sbjct: 230 ALSALQGTN 238
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +3
Query: 69 LDKLKAERERGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 236
LD + ERERGITI + + +E + + + +ID PGH DF + + + A+L+
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 237 VAAGTG 254
V A G
Sbjct: 183 VDASQG 188
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 249 TG 254
G
Sbjct: 168 GG 169
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D + ERE+GITI A Y V IID PGH DF + D A+L++ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 249 TG 254
G
Sbjct: 168 GG 169
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D L E+ R IT+ + + Y + +ID+PGH DF + T +D A+++V A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 249 TG 254
G
Sbjct: 109 EG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 248
+D ++ E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSV 195
Query: 249 TG 254
G
Sbjct: 196 AG 197
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 66 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 245
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 120 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 179
Query: 246 GTG 254
G
Sbjct: 180 VEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 36.3 bits (80), Expect = 0.019
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = +3
Query: 66 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 245
++D ERERGITI V IID PGH DF + + D +L+V +
Sbjct: 119 IMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDS 178
Query: 246 GTG 254
G
Sbjct: 179 VEG 181
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 87 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 251
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 252 G 254
G
Sbjct: 245 G 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 87 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 251
E+ER I+I + L + Y I+D PGH +F M AD AVLIV A
Sbjct: 185 EQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAE 244
Query: 252 G 254
G
Sbjct: 245 G 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 35.5 bits (78), Expect = 0.033
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +3
Query: 69 LDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSQAD 221
LDKL +RERGIT+ E S Y + +ID PGH DF + S
Sbjct: 103 LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQ 160
Query: 222 CAVLIVAAGTG 254
A+L+V A G
Sbjct: 161 GALLVVDAAQG 171
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 150 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 254
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 135 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 245
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 135 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 245
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 147 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 245
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +3
Query: 129 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 245
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 314 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 475
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 544 KEGKADGKCLIEALDAILPPARPTDKP 624
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 156 IIDAPGHRDFIKNMITGTSQADCAVLIV 239
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 156 IIDAPGHRDFIKNMITGTSQADCAVLIV 239
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 156 IIDAPGHRDFIKNMITGTSQADCAVLIV 239
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At5g34780.1 68418.m04048 dehydrogenase E1 component family protein
similar to SP|P50136 2-oxoisovalerate dehydrogenase
alpha subunit, mitochondrial precursor (EC 1.2.4.4)
(Branched-chain alpha-keto acid dehydrogenase component
alpha chain) {Mus musculus}; contains Pfam profile
PF00676: Dehydrogenase E1 component
Length = 365
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = +1
Query: 469 FWMARRQHVGAFNQMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDV 648
+W R V F + GW E E K + L AI + +PL DV
Sbjct: 151 YWKMSRNSVNRFRKSVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFNDV 210
Query: 649 YKI 657
Y +
Sbjct: 211 YDV 213
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 138 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 239
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 150 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 239
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 472
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = +1
Query: 469 FWMARRQHVGAFNQMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDV 648
+W R V F + GW E E K + L AI + +PL DV
Sbjct: 381 YWKMSRNPVNRFRKWVEDNGWWSEEDESKLRSNARKQLLQAIQAAEKWEKQPLTELFNDV 440
Query: 649 YKI 657
Y +
Sbjct: 441 YDV 443
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +3
Query: 75 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 242
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 243 AGTG 254
A G
Sbjct: 585 ADDG 588
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 377 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 466
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 383 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 493
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 674 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 570
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 260 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 418
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 359 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 472
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 359 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 472
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At1g01060.2 68414.m00007 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 544 KEGKADGKCLIEALDAILPPARPTDKP 624
KE + G + +ALD +PP RP KP
Sbjct: 74 KEAEVKGIPVCQALDIEIPPPRPKRKP 100
>At1g01060.1 68414.m00006 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain;
identical to cDNA LATE ELONGATED HYPOCOTYL MYB
transcription factor GI:3281845
Length = 645
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 544 KEGKADGKCLIEALDAILPPARPTDKP 624
KE + G + +ALD +PP RP KP
Sbjct: 74 KEAEVKGIPVCQALDIEIPPPRPKRKP 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,785,514
Number of Sequences: 28952
Number of extensions: 372383
Number of successful extensions: 1275
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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