Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20947
(712 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00006D00C8 Cluster: hypothetical protein TTHERM_0082... 36 0.74
UniRef50_Q1Z9H2 Cluster: A protein; n=3; Photobacterium profundu... 34 3.0
UniRef50_A4EFH7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_P36786 Cluster: Regulatory protein E2; n=3; Betapapillo... 34 3.0
UniRef50_Q2GWI5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_UPI00015B4CFC Cluster: PREDICTED: similar to GA19380-PA... 33 5.2
UniRef50_Q3W3N2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q9HCS5 Cluster: Band 4.1-like protein 4A; n=32; Eumetaz... 33 5.2
UniRef50_A4EDX6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q967S6 Cluster: Reverse transcriptase-like polymerase; ... 33 6.9
UniRef50_Q0B5X3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_A3UZR4 Cluster: Putative uncharacterized protein; n=2; ... 33 9.2
UniRef50_Q5JPZ2 Cluster: OSJNBa0004L19.22 protein; n=8; Oryza sa... 33 9.2
UniRef50_O45453 Cluster: Putative uncharacterized protein; n=2; ... 33 9.2
UniRef50_P53201 Cluster: SWR1-complex protein 4; n=2; Saccharomy... 33 9.2
>UniRef50_UPI00006D00C8 Cluster: hypothetical protein TTHERM_00823370;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00823370 - Tetrahymena thermophila SB210
Length = 1303
Score = 36.3 bits (80), Expect = 0.74
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +3
Query: 306 SIHNTDHNQRLQSRSSTKIEEASRTENGTFKILNKPFSIHRRFAQTDDSPGDRVVFPGLT 485
+I +D N + Q++S +A++ N + +NK I+ + + + + PG
Sbjct: 992 AIKKSDKNSQKQNKSYQF--QANQNGNNNLENINKQNQINNGYYLPQEKNDQKPISPGNQ 1049
Query: 486 SRSGV---NP*SQKSRSRARKLASVTRYR--ITQENK*KRSLLSWARKQSFNS 629
++S + NP +Q + L + + + I QE K K + + ++RKQS+N+
Sbjct: 1050 NQSSMLSNNPYNQIQNEFEQNLQQIPKQQLDILQEQKIKLNSILYSRKQSYNN 1102
>UniRef50_Q1Z9H2 Cluster: A protein; n=3; Photobacterium profundum
3TCK|Rep: A protein - Photobacterium profundum 3TCK
Length = 358
Score = 34.3 bits (75), Expect = 3.0
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 509 VPEIPESCKKIGICDKIPNYPREQVEKIVAKLGEKTEFQFDKLDLPSIPDIAQRTGSFED 688
V +I E ++ G ++ + +Q ++ + ++ E T F FD+ P+ A G F+
Sbjct: 293 VTDIFEVLEREGEYQRMADEQYDQYQQYLQRVDELTAFAFDESQWPAFVGAAHDVGDFDS 352
Query: 689 SYELC 703
S +LC
Sbjct: 353 SLDLC 357
>UniRef50_A4EFH7 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. CCS2|Rep: Putative uncharacterized
protein - Roseobacter sp. CCS2
Length = 619
Score = 34.3 bits (75), Expect = 3.0
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 551 DKIPNYPREQVEKIVAKLGE-KTEFQFDKLDLPSIPDIAQR 670
D+IP + R+++E+++AKL TE Q D D+ SI D QR
Sbjct: 412 DQIPKFNRDELEQLLAKLSALVTETQPDGTDMVSIIDATQR 452
>UniRef50_P36786 Cluster: Regulatory protein E2; n=3;
Betapapillomavirus|Rep: Regulatory protein E2 - Human
papillomavirus type 19
Length = 493
Score = 34.3 bits (75), Expect = 3.0
Identities = 27/94 (28%), Positives = 43/94 (45%)
Frame = +3
Query: 282 EPNRMSERSIHNTDHNQRLQSRSSTKIEEASRTENGTFKILNKPFSIHRRFAQTDDSPGD 461
+PN S+ TD RL +S + + + T+ ++ +P S RR QT
Sbjct: 212 DPNTSSKTPTTTTDSASRLSPTASREQSQQTNTKGRRYE--RRPSSRTRRQTQTRQKRSR 269
Query: 462 RVVFPGLTSRSGVNP*SQKSRSRARKLASVTRYR 563
SRS +++SRS++R+ AS TR R
Sbjct: 270 SKSKSRSRSRSRSLSSNRRSRSKSRRKASTTRGR 303
>UniRef50_Q2GWI5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 420
Score = 33.9 bits (74), Expect = 4.0
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 577 FSWVIRYLVTDANFLARLRDFWDYGFTPDLEVSPGNTTLSPGES 446
+SW + +V A+FL DFW + LEV GN T+ S
Sbjct: 217 WSWGLMPIVNQASFLWNATDFWGHNDWDMLEVGNGNLTIEESRS 260
>UniRef50_UPI00015B4CFC Cluster: PREDICTED: similar to GA19380-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA19380-PA - Nasonia vitripennis
Length = 265
Score = 33.5 bits (73), Expect = 5.2
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 503 PIVPEIPES-CKKIGICDKIPNYPREQVEKIVAKLGEKTEFQFDKLDLPSIPDIAQRTGS 679
P P P S C+ C+ PNYP+E ++ + + F D L LP + + R +
Sbjct: 77 PQFPVRPHSGCENSTFCENTPNYPKEYLQAALRTNKDLKFFSSDDLVLPDV--LVHRVNA 134
Query: 680 F-EDSYELCD 706
+D LC+
Sbjct: 135 LPDDDAPLCE 144
>UniRef50_Q3W3N2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 295
Score = 33.5 bits (73), Expect = 5.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 413 ILDTQTICSNGRLSGRQGGVPGADLKVRRKPIVPEIPESCKKIGICDKIPNYPREQVEKI 592
++ Q S+ R SGR G+P RR P VP + C+ IC ++P +P +
Sbjct: 136 VVPKQPGLSSRRQSGRGSGIPYPRSGGRRPPAVPTGGQRCRP--ICGRVPLFPAAIAGRF 193
Query: 593 VA 598
+A
Sbjct: 194 IA 195
>UniRef50_Q9HCS5 Cluster: Band 4.1-like protein 4A; n=32;
Eumetazoa|Rep: Band 4.1-like protein 4A - Homo sapiens
(Human)
Length = 598
Score = 33.5 bits (73), Expect = 5.2
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +3
Query: 291 RMSERSIHNTDHNQRLQSRSSTKIEEASRTENGTFKILNKPFSIHRRFAQTDDSPGDRVV 470
R + S ++D QR +SRS S +EN + K I + D +P V
Sbjct: 460 RKAHNSGEDSDLKQRRRSRSRCNTSSGSESENSNREHRKKRNRIRQENDMVDSAPQWEAV 519
Query: 471 FPGLTSRSGVNP*SQKSRSRAR 536
++ +P S++SR R+R
Sbjct: 520 LRRQKEKNQADPNSRRSRHRSR 541
>UniRef50_A4EDX6 Cluster: Putative uncharacterized protein; n=1;
Roseobacter sp. CCS2|Rep: Putative uncharacterized
protein - Roseobacter sp. CCS2
Length = 511
Score = 33.1 bits (72), Expect = 6.9
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 405 NKPFSIHRRFAQTDDSPGDRVVFPGLTSRSGVNP*SQKSRSRARKLASVTRYRIT 569
++ + + R+ AQ GDRV+FP L S P Q++ +RA L ++T+ +T
Sbjct: 265 SRAYLLLRQGAQLVGKMGDRVLFPTLASIQDDKPRLQRALNRALSLVAMTQIPLT 319
>UniRef50_Q967S6 Cluster: Reverse transcriptase-like polymerase;
n=3; Acalyptratae|Rep: Reverse transcriptase-like
polymerase - Drosophila melanogaster (Fruit fly)
Length = 1059
Score = 33.1 bits (72), Expect = 6.9
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -1
Query: 562 RYLVTDAN-FLARLRDFWDYGFTPDLEVSPGNTTLSPGESSV*ANRLCIENGLFKILKVP 386
RY + D N LA+L D + L++ G + ES + I NG ++ ++P
Sbjct: 267 RYPIPDINEVLAQLGDNKIFSV---LDLKSGFHQILLKESDIEKTAFSINNGKYEFTRLP 323
Query: 385 FSVRDASSIFVELLD 341
F +++A SIF LD
Sbjct: 324 FGLKNAPSIFQRALD 338
>UniRef50_Q0B5X3 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria AMMD|Rep: Putative
uncharacterized protein - Burkholderia cepacia (strain
ATCC 53795 / AMMD)
Length = 155
Score = 32.7 bits (71), Expect = 9.2
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 419 DTQTICSNGRLSGRQGGVPGADLKVRRKPIVPEIPESCKKIGICDKIPNYPR-EQVEKIV 595
D + C+ GR + R GG+ K + P+ P PE+ + + + + E VE I
Sbjct: 69 DARHACAPGR-ARRWGGIAAKAAKAAKAPVAPVAPEAVEVVAVVAVVEAVEAVEAVEAIE 127
Query: 596 AKLGEKTEFQFDKLDLPSIPDIAQRTGS 679
A + + ++ P +AQR S
Sbjct: 128 AVEAVEAAEAAEAMETEEKPTVAQRATS 155
>UniRef50_A3UZR4 Cluster: Putative uncharacterized protein; n=2;
Vibrio|Rep: Putative uncharacterized protein - Vibrio
splendidus 12B01
Length = 1684
Score = 32.7 bits (71), Expect = 9.2
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +2
Query: 461 QGGVPGADLKVRRKPIVPEIPESCKKIGICDKIPNYPREQVEKIVAKLGEKTEFQFDKLD 640
Q VPG D + E+PE ++ + + + Q+E+ +A EK F+FD LD
Sbjct: 1272 QAEVPGQDSEDEFSFDDFELPEFGEEDALAEVVSEPDEAQLEQDLAPEAEK--FEFDDLD 1329
Query: 641 LPSIPDIAQRTGSFEDSYE 697
LP + + + S D E
Sbjct: 1330 LPEYDEESAKADSVLDDIE 1348
>UniRef50_Q5JPZ2 Cluster: OSJNBa0004L19.22 protein; n=8; Oryza
sativa|Rep: OSJNBa0004L19.22 protein - Oryza sativa
(Rice)
Length = 1586
Score = 32.7 bits (71), Expect = 9.2
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +2
Query: 554 KIPNYPREQVEKIVAKLGEKTEFQFDKLDLP-SIPDIAQRTGSFEDSYELC-DFR 712
++P+Y +E +EKI+A+L E E Q D+P S P + R + S+ LC D+R
Sbjct: 694 RVPHYQKEAMEKIIAELIESKEIQVS--DIPYSSPAVMVR--KKDGSWRLCVDYR 744
>UniRef50_O45453 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 288
Score = 32.7 bits (71), Expect = 9.2
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 327 CGLCCESTFHSCDSVQLPDISVGDLRRI 244
CG CCE++ +SC++ LP ++ ++ I
Sbjct: 102 CGYCCETSAYSCENPPLPSVNCSTIKPI 129
>UniRef50_P53201 Cluster: SWR1-complex protein 4; n=2; Saccharomyces
cerevisiae|Rep: SWR1-complex protein 4 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 476
Score = 32.7 bits (71), Expect = 9.2
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +3
Query: 246 FASSHPQKYLAAEPNRMSERSIHNTDHNQRLQSRSSTKI--EEASRTENGTFKILNKPFS 419
F +S P L + N +E+ I + QRL SRS+ +I EEA E+ F++ K
Sbjct: 213 FKASDPSNPLLSSLNFSAEKEIERKKYLQRLLSRSAAEIAEEEALVVESKKFEMAAKRTL 272
Query: 420 IHRR-FAQTDDSP-GDRVVFPGLTSR 491
R + DSP D+ + LTS+
Sbjct: 273 AERESLLRLLDSPHSDQTITQYLTSQ 298
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,947,068
Number of Sequences: 1657284
Number of extensions: 16305506
Number of successful extensions: 45807
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 43827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45783
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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