Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20947
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    25   0.61 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    25   0.61 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    25   0.61 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.5  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.9  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 628 ELKLCFLAQLSNDLFYLFSWVIRYLVTDANFLARLRDFWDYGF 500
           E+    L   ++DL ++   +   L    N L R+  +W +GF
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGF 328


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 628 ELKLCFLAQLSNDLFYLFSWVIRYLVTDANFLARLRDFWDYGF 500
           E+    L   ++DL ++   +   L    N L R+  +W +GF
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGF 328


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 628 ELKLCFLAQLSNDLFYLFSWVIRYLVTDANFLARLRDFWDYGF 500
           E+    L   ++DL ++   +   L    N L R+  +W +GF
Sbjct: 286 EISYIVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGF 328


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 216 LQIQTE*PAGFASSHPQKYLAAEPNRMSERSIHNTDHNQRLQSR 347
           ++++ E   G   S P++   AE   +SER I     N+R++ +
Sbjct: 101 VELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHK 144


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -1

Query: 175 VSVPFQNTTTLYVKQRLATDLRSRRSHNK--CISTC 74
           V + FQN    Y K+ L        + NK  C+ TC
Sbjct: 161 VKIWFQNRRVKYKKEDLPAAAGKASNGNKCCCLRTC 196


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 216 LQIQTE*PAGFASSHPQKYLAAEPNRMSERSIHNTDHNQRLQSR 347
           ++++ E   G   S P++   AE   +SER I     N+R++ +
Sbjct: 92  VELEREFHHGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHK 135


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = -3

Query: 173 IRAISKHYNTIRKTTFGD*LTLAPVTQ*MHFDLSTLIIC 57
           ++ + K YN     T    + +  + Q   F L  LI+C
Sbjct: 178 VKGLGKQYNIASSKTLKLSINIISLVQLWIFQLYLLILC 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,237
Number of Sequences: 336
Number of extensions: 4116
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)