Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20946
(753 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 24 1.3
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.8
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.8
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.8
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 24 1.8
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 7.1
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 22 7.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 7.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 9.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.4
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 150 EKGFLINLIDSPGHVDFSSEVTAALRVTD 236
E G + +D+PGH F S +TD
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITD 218
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 652 KDDDNKRSFCMYVLDPIYKVFDAIMK 729
KD+ NK+ + + +YK+ D I K
Sbjct: 546 KDEANKKGVSLRFYNVVYKLIDNIKK 571
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 159 FLINLIDSPGHVDFSSEVTAALRVTDGA 242
+ + +ID+PGH DF + D A
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCA 112
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 159 FLINLIDSPGHVDFSSEVTAALRVTDGA 242
+ + +ID+PGH DF + D A
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCA 39
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 159 FLINLIDSPGHVDFSSEVTAALRVTDGA 242
+ + +ID+PGH DF + D A
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCA 55
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 159 FLINLIDSPGHVDFSSEVTAALRVTDGA 242
+ + +ID+PGH DF + D A
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCA 112
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 275 HTHQTHSNNHKGSISD 228
H HQ+ S NH ++ D
Sbjct: 630 HFHQSPSQNHSSAVPD 645
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 78 ISMFFELEEKDLVFITNPDQREKSEKGFLI 167
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 227 CH*WSPCGCYCVSGVCV 277
CH G +C GVC+
Sbjct: 39 CHSLGKAGGHCEKGVCI 55
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 78 ISMFFELEEKDLVFITNPDQREKSEKGFLI 167
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 54 CITIKSTAISMFF 92
C T+K +A+ M+F
Sbjct: 688 CATVKGSAVDMYF 700
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 410 QYAGTSGIVLQLQVG 366
+Y SG+V+QLQ G
Sbjct: 1549 EYGAVSGLVVQLQRG 1563
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,518
Number of Sequences: 438
Number of extensions: 4373
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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