Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20945
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 102 3e-22
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 9e-17
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 81 7e-16
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 79 3e-15
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 72 5e-13
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 63 2e-10
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 56 3e-08
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 55 5e-08
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 51 1e-06
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 46 2e-05
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 42 5e-04
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 39 0.005
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 38 0.008
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 36 0.025
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 36 0.033
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 34 0.13
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_7381| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_49759| Best HMM Match : bZIP_1 (HMM E-Value=0.93) 30 2.1
SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_48181| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2) 29 4.9
SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7) 29 4.9
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_26205| Best HMM Match : Interferon (HMM E-Value=3.4) 28 6.5
SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12) 28 8.6
SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19) 28 8.6
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 102 bits (244), Expect = 3e-22
Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 5/90 (5%)
Frame = +2
Query: 254 IWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 433
+W++EFFAPWCGHC+ L PE+ KAA LKG VKVGALDA H + +Y V G+PTIK+F
Sbjct: 99 LWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVHTVTASRYQVQGYPTIKVF 158
Query: 434 -TGSKHT----PYQGQRTAEGFVEAALNAA 508
G K++ YQG RTA ++ AL+ A
Sbjct: 159 AAGIKNSHSVEDYQGGRTASDIIQYALDKA 188
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = +2
Query: 371 DEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFVEAALNAAR 511
D H+SV Y + GFPTIKIF +K++P Y GQRTA+G V+AA+ AA+
Sbjct: 2 DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIVDAAMRAAQ 50
Score = 50.4 bits (115), Expect = 1e-06
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
+APWCGHC+ L P WAKAATELK
Sbjct: 105 FAPWCGHCQRLAPEWAKAATELK 127
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +1
Query: 571 VITLTDSNFKELVLDSDDLWLVE 639
V+ LTD+NF++ VL+S DLWLVE
Sbjct: 81 VVELTDTNFEKEVLNSKDLWLVE 103
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 84.2 bits (199), Expect = 9e-17
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = +2
Query: 254 IWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTI 424
+ ++EFFAPWCGHCK L PEY+KAA+ L+ + + +DA ++QKY V G+PT+
Sbjct: 195 LMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTL 254
Query: 425 KIFTGSKHTPYQGQRTAEG 481
K+F K T Y+GQR G
Sbjct: 255 KVFRKGKATEYKGQRDQYG 273
Score = 81.4 bits (192), Expect = 7e-16
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +2
Query: 254 IWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADEHRSVSQKYGVTGFPTI 424
I ++EF+APWCGHCKSL PEY KAA+ +K V +DA ++Q++ V+G+PT+
Sbjct: 80 IILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTL 139
Query: 425 KIFTGSKHTPYQGQRTAEGFVE 490
KIF Y+G R G VE
Sbjct: 140 KIFRKGTPYEYEGPREESGIVE 161
Score = 45.6 bits (103), Expect = 4e-05
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWCGHCK+L P +AKAA ++K
Sbjct: 86 YAPWCGHCKSLAPEYAKAAKKMK 108
Score = 43.2 bits (97), Expect = 2e-04
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELKR 713
+APWCGHCK L P + KAA EL++
Sbjct: 201 FAPWCGHCKQLAPEYEKAAQELQK 224
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALDADEHRSVSQKYGVTGFPTIKIF 433
+IEF+APWCG +L P +KK + + + + +DA + V Y V GFPTI
Sbjct: 547 LIEFYAPWCG--IALEPTFKKLGKHFRNDKNIVIAKIDATAN-DVPSTYAVEGFPTIYFA 603
Query: 434 TG-SKHTP--YQGQRTAEGFVE 490
T K P + G R + ++
Sbjct: 604 TSKDKKNPIKFDGGRELKDLIK 625
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 81.4 bits (192), Expect = 7e-16
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKI 430
++EF+APWCGHCK+L PEY KAA L K +K+ +DA + +K+ V G+PTIK
Sbjct: 45 LVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKF 104
Query: 431 FTGSKHTPYQGQRTAEGFV 487
F K + Y G RTA V
Sbjct: 105 FKDGKPSEYAGGRTAPEIV 123
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 263 IEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TG 439
+EF+APWCGHCK L P + + K + D + + V FPTIK F
Sbjct: 407 VEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHSFPTIKYFPKE 466
Query: 440 SKHTPYQGQRTAEGFVE 490
+ Y G RT + FV+
Sbjct: 467 GEAVDYNGGRTLDDFVK 483
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWCGHCK L P +AKAA +LK
Sbjct: 49 YAPWCGHCKALAPEYAKAAGQLK 71
Score = 38.7 bits (86), Expect = 0.005
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWCGHCK L P W + + K
Sbjct: 410 YAPWCGHCKQLAPIWDQLGEKYK 432
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Frame = +2
Query: 254 IWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALDADE-HRSVSQKYGVTGFPT 421
I ++EFFAPWCGHCK L PEY+ AA ALK V + +D E + KYGV+G+PT
Sbjct: 557 IMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPT 616
Query: 422 IKIF-TGSKHTPYQGQRTAEGFV 487
+KIF G Y G R + G +
Sbjct: 617 LKIFRNGEMSKDYDGPRDSSGII 639
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +2
Query: 218 E*FRQISYKFRRIWIIEFFAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVS 391
E F++I + +IEF+APWCGHCKSL P+Y + L+ + + + +DA +
Sbjct: 870 ENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKLQDVKDIVIAKMDATAN-DAP 928
Query: 392 QKYGVTGFPTIKI 430
+ V G I I
Sbjct: 929 PNFSVQGIIIISI 941
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELKR 713
+APWCGHCK L P + AA LK+
Sbjct: 563 FAPWCGHCKRLAPEYETAAEALKK 586
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWCGHCK+LEP + + +L+
Sbjct: 888 YAPWCGHCKSLEPKYNELGEKLQ 910
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 433
++EF+APWCGHCK L P Y++ A V + +DAD R + ++ V GFPTIK F
Sbjct: 43 LVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDRDLGSRFDVKGFPTIKYF 102
Query: 434 TGSKHTP--YQGQRTAEGFVE 490
TP Y G R F++
Sbjct: 103 PKGSTTPEEYNGGRDINDFIK 123
Score = 34.7 bits (76), Expect = 0.075
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 642 YAPWCGHCKNLEP 680
YAPWCGHCK L P
Sbjct: 47 YAPWCGHCKQLAP 59
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Frame = +2
Query: 254 IWIIEFFAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDADEHRS--VSQKYGVTGFPT 421
I +++F+APWC HC+ L+P+ + AA AL KG+ + +D + RS + + + G+P+
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAKVDCTDPRSKVLCDNFKIEGYPS 98
Query: 422 IKIFTGSKHT-PYQGQRTAEGFV 487
+K+F K+ Y GQRT V
Sbjct: 99 VKLFKFGKYAGDYIGQRTDAALV 121
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATEL 707
YAPWC HC+ L P AA L
Sbjct: 45 YAPWCHHCQELLPQLEGAANAL 66
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 251 RIWIIEFFAPWCGHCKSLVPEYKKAARALKG-IVKVGALDADEHRSVSQKYGVTGFPTIK 427
R + ++FFAPWC C L+PEY+KAAR+ G V G +D H + +Y + +PT
Sbjct: 303 RPFFVDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTVHSQLCHQYNIRSYPTTI 362
Query: 428 IFTGSKHTPYQGQRTAEGFVE 490
++ S+ + G A +E
Sbjct: 363 LYNNSQPHQFIGHHNALDIIE 383
Score = 62.5 bits (145), Expect = 3e-10
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 257 WIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFT 436
W+++F+APWCG C P+Y++ A+ LKG V+ ++ ++ + + + +PT++++
Sbjct: 454 WVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQDYGLCSEANIHSYPTVRLYL 513
Query: 437 GS 442
GS
Sbjct: 514 GS 515
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWCG C P + + A LK
Sbjct: 459 YAPWCGPCMRFAPKYEQLAKMLK 481
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAA 698
+APWC C L P + KAA
Sbjct: 310 FAPWCPPCMRLLPEYRKAA 328
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKI 430
++ +FAPWCGHC + P Y KAA+ L + A+D +H+ V++K + G+PT+K+
Sbjct: 71 LVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKL 130
Query: 431 FTGS 442
+ S
Sbjct: 131 YKAS 134
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARALKGIVK--VGALDADEHRSVSQKYGVTGFPTIKIF 433
++ F+APWCGHCK+ P+Y+KAA K LD + V K V G+PT++ +
Sbjct: 168 LVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCTKFGDVCDKEEVNGYPTLRYY 227
Query: 434 TGSKH-TPYQGQRTAEGFV 487
K Y G R E +
Sbjct: 228 LYGKFVVEYDGDRVTEDLI 246
Score = 42.3 bits (95), Expect = 4e-04
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWCGHCKN +P + KAA K
Sbjct: 172 YAPWCGHCKNAKPKYEKAAETFK 194
Score = 37.1 bits (82), Expect = 0.014
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATEL 707
+APWCGHC ++P++ KAA L
Sbjct: 75 FAPWCGHCNEMKPNYYKAAQVL 96
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVG---ALDADEHRSVSQKYGVTGFPT 421
++ F+APWCGHCK++ PEY AA+ LK G A+DA + ++ +++ V G+PT
Sbjct: 103 LVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWCGHCK ++P + AA LK
Sbjct: 107 YAPWCGHCKAMKPEYVDAAQTLK 129
Score = 39.5 bits (88), Expect = 0.003
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAAR 331
++ F+APWCGHCK PE AA+
Sbjct: 216 LVMFYAPWCGHCKKAKPELMSAAK 239
Score = 35.9 bits (79), Expect = 0.033
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWCGHCK +P AA K
Sbjct: 220 YAPWCGHCKKAKPELMSAAKHHK 242
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 639 VYAPWCGHCKNLEPHWAKAATELK 710
+Y CG+CK +P +A AATE K
Sbjct: 6 LYIAGCGYCKRFKPEFAAAATEHK 29
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2
Query: 254 IWIIEFFAPWCGHCKSLVPEYKKAARALK 340
I ++EFFAPWCGHCK L PEY+ AA ALK
Sbjct: 32 IMLVEFFAPWCGHCKRLAPEYETAAEALK 60
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELKR 713
+APWCGHCK L P + AA LK+
Sbjct: 38 FAPWCGHCKRLAPEYETAAEALKK 61
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEH----RSVSQKYGVTGF 415
+++F+APWC HCK + P+YK A+ L V++ +D + + +KY V
Sbjct: 155 LVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFL 214
Query: 416 PTIKIFTGSKHT-PYQG----QRTAEGFVEAALNAA 508
PTI +F K ++G +++ +GFV A+ A
Sbjct: 215 PTIYLFHDGKFVEEFEGNNRNKKSIKGFVMDAVKEA 250
Score = 34.7 bits (76), Expect = 0.075
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATEL 707
YAPWC HCK + P + A EL
Sbjct: 159 YAPWCFHCKKMAPDYKDVAKEL 180
Score = 33.5 bits (73), Expect = 0.17
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARALK 340
+++F+APWC C+ L P + AA L+
Sbjct: 72 LVDFYAPWCSDCQRLSPLFDTAALQLR 98
Score = 31.5 bits (68), Expect = 0.70
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWC C+ L P + AA +L+
Sbjct: 76 YAPWCSDCQRLSPLFDTAALQLR 98
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 251 RIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKI 430
++ + +F A WCG CKS+ P Y + K V + +D D + ++ K GVT PT +
Sbjct: 28 KLVVADFTASWCGPCKSIAPVYSGLSEKYKQAVFL-KIDVDVCQELAAKQGVTAMPTFQF 86
Query: 431 F 433
F
Sbjct: 87 F 87
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +2
Query: 242 KFRRIWIIEFFAPWCGHCKSLVPEYKKAARAL----KGIVKVGALDADEHRSVSQKYGVT 409
K + + +++F+APWC C +L P+Y+KAAR L K ++ ++ + ++ GV
Sbjct: 37 KDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVH 96
Query: 410 GFPTIKIFTGSKH 448
+ T+ +T H
Sbjct: 97 YWRTLLAYTIGVH 109
Score = 36.7 bits (81), Expect = 0.019
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELKR 713
YAPWC C NL P + KAA +L +
Sbjct: 47 YAPWCSDCDNLRPKYEKAARDLAK 70
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 251 RIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKI 430
R+ +I+F A WCG CKS+ P + + +V + +D D+ + ++ G+ PT
Sbjct: 29 RLVVIDFTATWCGPCKSIAPVFTNLSMKFMDVVFL-KVDVDQCQLTAESCGIRAMPTFHF 87
Query: 431 F 433
+
Sbjct: 88 Y 88
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Frame = +2
Query: 260 IIEFFAPWCGHCKSLVPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKIF 433
++ F+ PWCG C + P AR + I V V +DAD++ + V+ +P+I +F
Sbjct: 539 LLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDADQN-DLPWNLTVSSYPSIILF 597
Query: 434 -TGSKHT----PYQGQRTAEGFVE 490
G K + P RTA +E
Sbjct: 598 PAGRKDSSIAFPSNTPRTATRLIE 621
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 251 RIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 376
++ +I+F+A WCG C+ + P++KK A V +D DE
Sbjct: 31 KLVVIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDE 72
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATE 704
YA WCG C+ ++P + K A E
Sbjct: 38 YAEWCGPCRQIKPKFKKMALE 58
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 242 KFRRIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDAD 373
K + I+F A WCG C+ + P++++ A+ KG VK +D D
Sbjct: 9 KDNEVAAIDFTATWCGPCRMIGPKFEEMAKEFKG-VKCAKVDVD 51
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 269 FFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 433
F+APWCG + V E+ AA L G V A++ S +KY + FP ++
Sbjct: 459 FYAPWCGQSRRAVEEFNIAASLLYGKVTFIAINC-WAGSCREKYTLDSFPKFFVY 512
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 35.9 bits (79), Expect = 0.033
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 263 IEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TG 439
++F+APWC HC L P +++ A K +AD ++S+ + G+PT+ +F G
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFKD-------NAD--ITISK---INGYPTLMLFKDG 158
Query: 440 SKHTPYQGQR 469
+ Y G R
Sbjct: 159 VQKKEYSGNR 168
Score = 34.7 bits (76), Expect = 0.075
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 642 YAPWCGHCKNLEPHWAKAATELK 710
YAPWC HC L P W + A + K
Sbjct: 114 YAPWCIHCIKLAPIWERLAEDFK 136
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Frame = +2
Query: 263 IEFFAPWCGHCKSLVPEYKKAAR--ALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFT 436
I F+APW HC+ ++ + + A A + + VG +A E ++ +Y + +P + F
Sbjct: 48 IFFYAPWDDHCQRILQIFDQVADEFADRDDIVVGKSNAYEDVKIATRYWIDRYPMFRYFI 107
Query: 437 GSKHT--PYQGQRTAEGFVEAALNAARRRHMKIS 532
T Y G + F+ A R ++K++
Sbjct: 108 KGSTTEETYDGGFKPDDFIRF---IAARSYLKLN 138
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +2
Query: 275 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 445
A WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +2
Query: 281 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 445
WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 56
>SB_56293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 350 KVGALDAD---EHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFVEAALNAARRR 517
++ A+D D HRS+S ++G + T + +G + PY ++ ++ + L A R
Sbjct: 169 EMSAVDWDASYSHRSISGEHGTSRLATARACSGELYNPYTDVHSSTSYLSSQLTAPSAR 227
>SB_7381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 452 PYQGQRTAEGFVEAALNAARRRHMKISARNRVGPLLISLMSL 577
P G+RT +G V +N + RH + N VG L+S + +
Sbjct: 31 PAIGERTRQGIVNVNVNITQMRHANNTVVNSVGRNLVSRLKI 72
>SB_49759| Best HMM Match : bZIP_1 (HMM E-Value=0.93)
Length = 316
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 440 SKHTPYQGQRTAEGFVEAALNAARRRHMKISARNRVG 550
S+ TP GQR G EAALNA R + A G
Sbjct: 185 SESTPTAGQRLVSGAAEAALNALRTGRVTSQAEWETG 221
>SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 440 SKHTPYQGQRTAEGFVEAALNAARRRHMKISARNRVG 550
S+ TP GQR G EAALNA R + A G
Sbjct: 715 SESTPSAGQRLVSGAAEAALNALRTGRVTSQAEWETG 751
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 257 WIIEFFAPWCGHCKSLVPEYKKAARALKGIVKV 355
++IE F P C H + LVP K A + G++ +
Sbjct: 914 YVIEPFFPHCSHREDLVPVIKILAASALGVITI 946
>SB_48181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 29.1 bits (62), Expect = 3.7
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Frame = +2
Query: 20 LTCLFYVFKLHIVVCCE----SRSQKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLR 187
L CL VF + C S F N I+S + H+ +R++Y+YL+ N +L
Sbjct: 26 LPCLIQVFVKEMAFRCSKFFASSFHTFENLRRISSDR-HSFSRVYYKYLS--NRILKFFA 82
Query: 188 FVF------RRYRADTE*FRQISYKFRRIWIIEFFA 277
F RR +D F + YK+ I +FFA
Sbjct: 83 SSFHTFENLRRISSDRHSFSRFYYKYLSNRISKFFA 118
>SB_43183| Best HMM Match : MethyltransfD12 (HMM E-Value=2)
Length = 604
Score = 28.7 bits (61), Expect = 4.9
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +2
Query: 20 LTCLFYVFKLHIVVCCE----SRSQKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLR 187
L CL VF + C S F N I+S + H+ +R++Y+YL+
Sbjct: 91 LPCLIQVFVKEMTFRCSKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASS 149
Query: 188 FV----FRRYRADTE*FRQISYKFRRIWIIEFFA 277
F RR +D F ++ YK+ I +FFA
Sbjct: 150 FHTFENLRRISSDRHSFSRVYYKYLSNRISKFFA 183
>SB_43128| Best HMM Match : DUF713 (HMM E-Value=6.7)
Length = 251
Score = 28.7 bits (61), Expect = 4.9
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +2
Query: 20 LTCLFYVFKLHIVVCCE----SRSQKFYNRLFINSVKFHNVTRIFYRYLALCNGVLGPLR 187
L CL VF + C S F N I+S + H+ +R++Y+YL+
Sbjct: 100 LPCLIQVFVKEMTFRCSKFFASSFHTFENLRRISSDR-HSFSRVYYKYLSNRISKFFASS 158
Query: 188 FV----FRRYRADTE*FRQISYKFRRIWIIEFFA 277
F RR +D F ++ YK+ I +FFA
Sbjct: 159 FHTFENLRRISSDRHSFSRVYYKYLSNRISKFFA 192
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 479 GFVEAALNAARRRHMKISARNRVGPLLISLMSLL 580
GF+++ + + R +H K +A N +G LL +++LL
Sbjct: 461 GFLQSLVISLRSKHRKTTAPNLIGMLLFIVVALL 494
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 26 CLFYVFKLHIVVCCESRSQKFYNRLFINSVKFHNVTRIFYRYLAL 160
C + + LH VVC R + +Y L ++ V ++YR L L
Sbjct: 2045 CYYRILTLH-VVCLAGRRELYYRILTLHVVCLAGRRELYYRILTL 2088
>SB_26205| Best HMM Match : Interferon (HMM E-Value=3.4)
Length = 464
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 458 QGQRTAEGFVEAALNAARRRHMKISARNRVGPLL 559
+G + G EA +N+ +RR +KIS N G LL
Sbjct: 377 KGMVRSVGQCEAGINSIKRRFLKISKYNESGVLL 410
>SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12)
Length = 290
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 269 FFAPWCGHCKSLVPEYKKAARALKGIVK 352
+ +PW G K P Y++ ARA+ +VK
Sbjct: 52 WMSPW-GFTKKFPPNYRRHARAMNAVVK 78
>SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19)
Length = 229
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 347 VKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFVEAALNAARRRHM 523
V++ ++ + V Q +T +PTIK+F G+ Y G A+ V+A + + +
Sbjct: 10 VRLARVNCFDWTDVCQDNNITVYPTIKLFRKGADELIYGGPLDADHLVKAVILLQQPSPI 69
Query: 524 KISARNRVGPLL 559
++S + + P L
Sbjct: 70 RLS-EDDIDPFL 80
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,736,773
Number of Sequences: 59808
Number of extensions: 446664
Number of successful extensions: 1050
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -