BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20944 (754 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06 SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003 SB_52664| Best HMM Match : Filament (HMM E-Value=0.3) 38 0.012 SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082 SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 32 0.43 SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 32 0.43 SB_12587| Best HMM Match : DUF901 (HMM E-Value=9.9) 32 0.43 SB_6415| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43 SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12) 32 0.57 SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_29537| Best HMM Match : Ribosomal_L3 (HMM E-Value=0.61) 31 1.3 SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_17984| Best HMM Match : DUF662 (HMM E-Value=4.7) 30 1.8 SB_48511| Best HMM Match : Ank (HMM E-Value=4.6e-20) 30 2.3 SB_10277| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3 SB_45938| Best HMM Match : Troponin (HMM E-Value=1) 30 2.3 SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 30 2.3 SB_21437| Best HMM Match : RNA_pol_Rpb6 (HMM E-Value=3) 30 2.3 SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7) 29 3.1 SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20) 29 3.1 SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 4.1 SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1) 29 4.1 SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 5.4 SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) 29 5.4 SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4 SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09) 29 5.4 SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4 SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 29 5.4 SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10) 29 5.4 SB_7809| Best HMM Match : V-SNARE (HMM E-Value=2.8) 29 5.4 SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28) 29 5.4 SB_24778| Best HMM Match : DUF1409 (HMM E-Value=4.2) 29 5.4 SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 5.4 SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036) 28 7.1 SB_39939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1 SB_32124| Best HMM Match : K-box (HMM E-Value=4.1) 28 7.1 SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1 SB_51946| Best HMM Match : PhyH (HMM E-Value=0.0025) 28 7.1 SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1 SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1 SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 28 7.1 SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 28 7.1 SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 28 9.4 SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7) 28 9.4 SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4 SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 28 9.4 SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24) 28 9.4 SB_44786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4 SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 28 9.4 SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 28 9.4 >SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 848 Score = 50.4 bits (115), Expect = 2e-06 Identities = 27/47 (57%), Positives = 35/47 (74%) Frame = +3 Query: 387 LDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSKRL 527 L+DL+LAAE+GK LLERNKELE L+ E+QA + E+L SK+L Sbjct: 290 LEDLELAAEIGKNLLERNKELEILLKSSHQFSEEQALKNEFL-SKQL 335 Score = 47.6 bits (108), Expect = 1e-05 Identities = 20/49 (40%), Positives = 36/49 (73%) Frame = +2 Query: 497 RNRILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKK 643 +N L+KQ LREVN++RL+ +EQ+E++ +L++AN +L + ++ KK Sbjct: 327 KNEFLSKQLETLREVNENRLKAFEQMEMTAMELQKANMKLQNETSSMKK 375 >SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 569 Score = 39.5 bits (88), Expect = 0.003 Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Frame = +3 Query: 345 EELEQDDLTSRRCMLD-DLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSK 521 EE D+ + + DL LAAELGK LLE+N+EL ++++ + E+ +Q +E L+ + Sbjct: 60 EETNDSDVYAELAQKEKDLLLAAELGKALLEKNEELS---QKYEKLQEEFSQRVEQLEQE 116 Query: 522 R 524 + Sbjct: 117 K 117 >SB_52664| Best HMM Match : Filament (HMM E-Value=0.3) Length = 394 Score = 37.5 bits (83), Expect = 0.012 Identities = 24/61 (39%), Positives = 35/61 (57%) Frame = +3 Query: 306 EVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485 E D++KK EE + + +D QLA ELGKTLLE+NKE E +++Q + E Sbjct: 2 EQEDVMKKLLALKEEATSLR-RENKALQNDCQLAGELGKTLLEQNKEWE---KKYQEMSE 57 Query: 486 D 488 + Sbjct: 58 E 58 >SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 932 Score = 34.7 bits (76), Expect = 0.082 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Frame = +2 Query: 572 LELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVE----AKCEELQKTVDELNVQLEI 739 LEL ++DLE + V A K+ I+S S I+ +E +KC LQ+T+ L +L Sbjct: 799 LELKVEDLEASIQEQLVCIKAKKEKIESYVSTIERLENESSSKCSSLQETIWGLEKELSQ 858 Query: 740 YRRR 751 ++ + Sbjct: 859 FKEK 862 >SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) Length = 3071 Score = 32.3 bits (70), Expect = 0.43 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = +2 Query: 569 QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLE 736 QLE I DLE AN RL D K + + + I +E K E K + L QL+ Sbjct: 1281 QLERKITDLETANERLKNDKKDLKADLIAANATITDLELKTEFSDKEIVSLKKQLD 1336 >SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) Length = 3489 Score = 32.3 bits (70), Expect = 0.43 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +2 Query: 542 NDSRLRIYEQLELSIQDLERAN---HRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTV 712 +D + + L +LE+ N +L+ D ++ + L +D K E+LQKT+ Sbjct: 2989 SDLESELETERALQANELEKQNKLLEKLSADLGHERSRCEDLSEQLDIERGKVEQLQKTL 3048 Query: 713 DEL 721 DE+ Sbjct: 3049 DEV 3051 Score = 27.9 bits (59), Expect = 9.4 Identities = 13/52 (25%), Positives = 27/52 (51%) Frame = +2 Query: 497 RNRILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIK 652 +N++ + E+N R Y+++E DLE A++ A +HA + ++ Sbjct: 232 KNQMRQSHMAEIEEMNRKMAREYQKIESLRADLEGAHNSSAQEHAHQLQELR 283 >SB_12587| Best HMM Match : DUF901 (HMM E-Value=9.9) Length = 253 Score = 32.3 bits (70), Expect = 0.43 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%) Frame = +1 Query: 373 HVAVC*TICNWRPN-SGKPYSNATRNSRQTFASI---KMLLKIKHKKSNTYKANGCFARG 540 +VAV + W PN G +S + TF I + L+KIK KK + K GC G Sbjct: 8 NVAVAEWLNRWTPNLMGSSHSGSNPARNDTFFGIFFEEYLIKIKKKKKSYSKIQGC--GG 65 Query: 541 E*LKVEDL*ATG 576 +K DL + G Sbjct: 66 RVVKALDLKSNG 77 >SB_6415| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 82 Score = 32.3 bits (70), Expect = 0.43 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%) Frame = +1 Query: 373 HVAVC*TICNWRPN-SGKPYSNATRNSRQTFASI---KMLLKIKHKKSNTYKANGCFARG 540 +VAV + W PN G +S + TF I + L+KIK KK + K GC G Sbjct: 8 NVAVAEWLNRWTPNLMGSSHSGSNPARNDTFFGIFFEEYLIKIKKKKKSYSKIQGC--GG 65 Query: 541 E*LKVEDL*ATG 576 +K DL + G Sbjct: 66 RVVKALDLKSNG 77 >SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12) Length = 495 Score = 31.9 bits (69), Expect = 0.57 Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 4/49 (8%) Frame = +3 Query: 390 DDLQLAAELGKTLLERNKELETDL----RQHQNVIEDQAQEIEYLQSKR 524 ++L++AAELGK +L N +++ R+H+ V+++ +EI + + R Sbjct: 71 EELKMAAELGKKMLAENDDIKMKYGELSREHEEVVKELDEEITRVTTDR 119 >SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3213 Score = 31.1 bits (67), Expect = 1.0 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +2 Query: 596 ERANHRLAVDH--AADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721 E NH+ +D ++ + I S S D VE +CEELQ DEL Sbjct: 893 ELTNHQTRIDTVLSSGQDLIDSCYSATDKVEERCEELQNLWDEL 936 >SB_29537| Best HMM Match : Ribosomal_L3 (HMM E-Value=0.61) Length = 261 Score = 30.7 bits (66), Expect = 1.3 Identities = 14/44 (31%), Positives = 26/44 (59%) Frame = +1 Query: 169 FTVITRFVKFRRRYISWSPSRCALCLVYVQEYIDVSHSAINSEQ 300 F +ITR+ R ++ S+S ++C+ C +Q Y+D + I+ Q Sbjct: 13 FVLITRY---RGKHFSYSKAKCSRCTDELQTYVDCTQIRISGTQ 53 >SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 694 Score = 30.3 bits (65), Expect = 1.8 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +1 Query: 115 IERQM*NRPVKFFSYSRSFTVITRFVKFRRRYISWSPSRCALCLVYVQEYIDVS-HSAIN 291 I R RP + +SFTVI++ V R + P +C +C ++ +S H I+ Sbjct: 452 IRRHTNERPYVCTTCGKSFTVISQLVMHNRSHTDERPYKCDICGKKFRQQGGLSIHKKIH 511 Query: 292 SEQ 300 +E+ Sbjct: 512 TEE 514 >SB_17984| Best HMM Match : DUF662 (HMM E-Value=4.7) Length = 301 Score = 30.3 bits (65), Expect = 1.8 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%) Frame = +2 Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC--------EEL 700 D + R+ ++LE + L + D A K I+S C+NI + C EE+ Sbjct: 164 DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNILGPKTHCHQDWFDENEEI 223 Query: 701 QKTVDELNVQLEIY 742 + +DE N L++Y Sbjct: 224 NRLIDEKNRLLKVY 237 >SB_48511| Best HMM Match : Ank (HMM E-Value=4.6e-20) Length = 753 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +2 Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604 +T R+ K+++A+RE+ SR+ I +Q+E S Q L A Sbjct: 354 TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 390 >SB_10277| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 48 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +2 Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604 +T R+ K+++A+RE+ SR+ I +Q+E S Q L A Sbjct: 5 TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 41 >SB_45938| Best HMM Match : Troponin (HMM E-Value=1) Length = 185 Score = 29.9 bits (64), Expect = 2.3 Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 2/83 (2%) Frame = +2 Query: 488 SSTRNRILTKQTVALREVNDSRLRIYEQLELSIQDLER--ANHRLAVDHAADKKHIKSLC 661 S +R R+L + + ND E +E ++D+++ +N R V+ D+ K Sbjct: 56 SRSRQRVLENKLAEAKAYNDQLESEREDMEYKVKDIKKKLSNERQRVEELEDELTSKKF- 114 Query: 662 SNIDTVEAKCEELQKTVDELNVQ 730 D+++ + E L T+ E + Q Sbjct: 115 -EKDSIKQEVELLSATLSETDEQ 136 >SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) Length = 1024 Score = 29.9 bits (64), Expect = 2.3 Identities = 18/64 (28%), Positives = 35/64 (54%) Frame = +3 Query: 315 DLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQA 494 ++V+ N ELE++ T R + DL+ +L + L E + + E DLR+ ++ ++ Sbjct: 459 EMVETLTDKNLELEEEVQTLRDTV-SDLEALRDLNEELEETHLQTEQDLREELDMTSNKV 517 Query: 495 QEIE 506 +E E Sbjct: 518 REAE 521 >SB_21437| Best HMM Match : RNA_pol_Rpb6 (HMM E-Value=3) Length = 112 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/38 (39%), Positives = 25/38 (65%) Frame = +2 Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604 +T R+ K+++A+RE+ SR+ I +Q+E S Q L A Sbjct: 69 TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 105 >SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7) Length = 434 Score = 29.5 bits (63), Expect = 3.1 Identities = 18/84 (21%), Positives = 41/84 (48%) Frame = +3 Query: 288 KQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQ 467 K+ E M V++K E+++ + +L + + + +E+E +RQ Sbjct: 219 KKKEQEEAMATVQQKLSERIRKEEEERDEMERIRLELYIEEQEERERQNEQQEMENKIRQ 278 Query: 468 HQNVIEDQAQEIEYLQSKRLLCER 539 ++ E + Q++E+ + +RLL E+ Sbjct: 279 RLDLQETRRQQLEF-KERRLLAEQ 301 >SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2672 Score = 29.5 bits (63), Expect = 3.1 Identities = 19/47 (40%), Positives = 26/47 (55%) Frame = +3 Query: 396 LQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSKRLLCE 536 LQLA E KTLLE + E + +L + ++E A E +S L CE Sbjct: 1601 LQLAQEAKKTLLEASDERDRELEHLKEMLEYGASSSE--KSHVLACE 1645 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/62 (29%), Positives = 31/62 (50%) Frame = +2 Query: 566 EQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLEIYR 745 E+LE I +L L + + + L + + ++++ +ELQ+ VDEL E R Sbjct: 1693 ERLEAEIAELANTVETLRTELEQSQVRLSKLQTQVKELKSEKKELQRKVDELT--SEAQR 1750 Query: 746 RR 751 RR Sbjct: 1751 RR 1752 >SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 879 Score = 29.5 bits (63), Expect = 3.1 Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 6/69 (8%) Frame = +3 Query: 327 KKFGGNEELEQDDLTSRRCMLDDLQLAA------ELGKTLLERNKELETDLRQHQNVIED 488 K+ N++LE+ + ++R + ++AA EL KT+ K + +L++H+N ++ Sbjct: 269 KQLANNKKLEEREKLAQRLERVEQEMAAKDKKISELQKTINMSEKARQRELKEHRNRYKN 328 Query: 489 QAQEIEYLQ 515 +E++ +Q Sbjct: 329 AKEELKKVQ 337 >SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20) Length = 906 Score = 29.5 bits (63), Expect = 3.1 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +2 Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC---------EE 697 D + R+ ++LE + L + D A K I+S C+NI + C EE Sbjct: 186 DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNILGPKTHCHQDWFDENNEE 245 Query: 698 LQKTVDELNVQLEIY 742 + + +DE N L++Y Sbjct: 246 INRLIDEKNRLLKVY 260 >SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) Length = 5087 Score = 29.1 bits (62), Expect = 4.1 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = +3 Query: 357 QDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQE 500 +++ T R +LD +Q E L++NKEL+T L + + ++E Sbjct: 4427 EEEATDRASLLDSIQGDKETISRALKQNKELKTQLEEIEKRFVKMSEE 4474 >SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1) Length = 505 Score = 29.1 bits (62), Expect = 4.1 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 131 YICRSMSVSNGCSMYASCVS 72 Y C S V+N CS+Y +CVS Sbjct: 202 YNCESCQVNNCCSIYENCVS 221 >SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) Length = 2122 Score = 28.7 bits (61), Expect = 5.4 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 7/62 (11%) Frame = +2 Query: 569 QLELSIQDLERANHRLAVDHAADKK------HIKSLC-SNIDTVEAKCEELQKTVDELNV 727 + E DLE+AN+RL+ + +K + +SL + +TVEA+ + LQK ++E N Sbjct: 778 ETERKCHDLEQANNRLSRERDECRKDWIEASNQRSLFETRAETVEAERKSLQKQLEEANR 837 Query: 728 QL 733 +L Sbjct: 838 KL 839 >SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) Length = 520 Score = 28.7 bits (61), Expect = 5.4 Identities = 20/59 (33%), Positives = 29/59 (49%) Frame = +2 Query: 578 LSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLEIYRRRA 754 ++ +D A HRL V+H K+ + C + EE Q+ +D LN QL R RA Sbjct: 173 MTAEDFLEAYHRLVVEHQLAKEEQEDRCDD--------EEFQE-IDSLNQQLTERRARA 222 >SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2520 Score = 28.7 bits (61), Expect = 5.4 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = +2 Query: 509 LTKQTVALREVNDSRLRIYE-QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEA 685 L K+ + LRE D +L + + + E+ +Q +E + + + L A Sbjct: 576 LEKKLLELREETDKKLEVTKKEAEIKVQSVEEQLSSQKAEELLVMQSERELGEK--AAMA 633 Query: 686 KCEELQKTVDELNVQLE 736 +CEE +K +ELN L+ Sbjct: 634 QCEEYKKKNNELNEALQ 650 >SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09) Length = 712 Score = 28.7 bits (61), Expect = 5.4 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +2 Query: 509 LTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSL 658 L + L++ N+S R E +DLER+N R+A D +A K+ ++ L Sbjct: 644 LEQHIETLKQQNNSLQRNNSSFEGEKRDLERSNVRIAKDVSALKRTLERL 693 >SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 482 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = +3 Query: 342 NEELEQDDLTSRRCMLDDLQLAAE--LGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515 N + +Q++L ++ +L+D+Q E KTL RNK+ E ++ + + + E + Sbjct: 150 NLQKQQEELRNK--ILEDVQALQEDERNKTLQVRNKQREVEIEHREYAARAERKMREVEE 207 Query: 516 SKRLLCE 536 +RL+ E Sbjct: 208 RQRLIAE 214 >SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) Length = 1312 Score = 28.7 bits (61), Expect = 5.4 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = +3 Query: 315 DLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQA 494 +L K + G E E D +T + + +D Q L +NKEL +D+ + Q +ED A Sbjct: 141 ELNKALYAGGSEYESDTMT--KSIREDNQT------DLRRKNKELRSDVEELQEQVEDMA 192 >SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10) Length = 948 Score = 28.7 bits (61), Expect = 5.4 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = +2 Query: 503 RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNI 670 RI K +A+R N SR L ++ + N R + + +H+K +C N+ Sbjct: 775 RICGKVFLAVRPSNKSREYAERSFWLFVRPTSQENMRECLSGSPSVQHVKRICGNV 830 >SB_7809| Best HMM Match : V-SNARE (HMM E-Value=2.8) Length = 116 Score = 28.7 bits (61), Expect = 5.4 Identities = 21/79 (26%), Positives = 34/79 (43%) Frame = +3 Query: 285 HKQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLR 464 H + + V D+ + NE LEQ DL +R + + KT K+ + DL+ Sbjct: 30 HGEAKRNTVADVERSFEEANELLEQMDLEAREITGPEKSKLSNRLKTYKNEMKKFKDDLK 89 Query: 465 QHQNVIEDQAQEIEYLQSK 521 + + DQ E L S+ Sbjct: 90 KARIAFSDQEGRNELLDSE 108 >SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28) Length = 558 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 4/76 (5%) Frame = +2 Query: 509 LTKQTVALREVNDSRLRIYEQLELSIQDLE----RANHRLAVDHAADKKHIKSLCSNIDT 676 LTK+ + + + + + + L+ + ++ E + N DH + +K D Sbjct: 51 LTKENNSFKGITEENKNLKQMLDCTERNFEAELRQINDAAKADHEVMENALKDAMRQHDE 110 Query: 677 VEAKCEELQKTVDELN 724 A+ +E KT+D+L+ Sbjct: 111 TVARLQETTKTLDDLS 126 >SB_24778| Best HMM Match : DUF1409 (HMM E-Value=4.2) Length = 74 Score = 28.7 bits (61), Expect = 5.4 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%) Frame = +2 Query: 554 LRIYEQLELSIQDLERANHRLAVD-------HAADKKHIKSLCSNIDTVEAKCEELQKTV 712 +R ++LE +++ +ER N ++ D H DK+ + NI TVE +EL T Sbjct: 3 VREKDKLEDNLKQMERINTKITKDLKDVQEKHKTDKEELVKCKKNIKTVE---QELATTK 59 Query: 713 DELNVQL 733 +LN L Sbjct: 60 HQLNEML 66 >SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) Length = 4160 Score = 28.7 bits (61), Expect = 5.4 Identities = 17/74 (22%), Positives = 36/74 (48%) Frame = +2 Query: 503 RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVE 682 R+ T + + L+ V+++ + Q+E +Q+ A RLA ++K + L ++ Sbjct: 1729 RVTTDELIRLKPVSEATQKKKGQVETELQN---ARKRLATLETTERKSEEELAKANHEIQ 1785 Query: 683 AKCEELQKTVDELN 724 +E+ + ELN Sbjct: 1786 VSKDEISRLETELN 1799 >SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036) Length = 1211 Score = 28.3 bits (60), Expect = 7.1 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%) Frame = +3 Query: 309 VMDLVKKKFGGNEELEQDDLTSRRCMLDDLQL-AAELGKTLLERNKELETDLRQHQNVIE 485 ++D KK GGN Q RRC + ++ A L + +ER K +E D ++ Q E Sbjct: 266 MLDKEKKVGGGNNVALQ-----RRCEELEHEINALRLEEAEMERLKAVEVDYKKLQKQQE 320 Query: 486 DQAQEIEYLQSKRLLCE 536 D +E+E K LL E Sbjct: 321 DIQRELE---DKELLAE 334 >SB_39939| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 92 Score = 28.3 bits (60), Expect = 7.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 291 Q*TMSEVMDLVKKKFGGNEELEQDD 365 Q T E+ DL KK F GN++ + DD Sbjct: 14 QNTPPELKDLAKKNFNGNDDDDNDD 38 >SB_32124| Best HMM Match : K-box (HMM E-Value=4.1) Length = 207 Score = 28.3 bits (60), Expect = 7.1 Identities = 17/58 (29%), Positives = 34/58 (58%) Frame = +3 Query: 342 NEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515 N+ L+ ++ R+ + D + + + LL++ KELE + + +EDQ +EIE+L+ Sbjct: 32 NDRLDNENQKLRKELADRV----DQNEILLKQVKELEKVRDEQMDDLEDQYKEIEHLK 85 >SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2848 Score = 28.3 bits (60), Expect = 7.1 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%) Frame = +2 Query: 509 LTKQTVALREVND---SRLRIYEQ---LELSIQDLERANHRLA-VDH--AADKKHIKSLC 661 L K+ +LRE N S L + E+ L L+ +++E +L V+ A +K+ L Sbjct: 2268 LEKEVSSLREANQVQQSTLTMTEKGGHLSLAQREVEHRKSQLERVEEKLALEKEQNAKLS 2327 Query: 662 SNIDTVEAKCEELQKTVDELNVQLE 736 S +DT + K + L D L QLE Sbjct: 2328 SRLDTKDEKLQTLISECDSLKRQLE 2352 >SB_51946| Best HMM Match : PhyH (HMM E-Value=0.0025) Length = 230 Score = 28.3 bits (60), Expect = 7.1 Identities = 13/57 (22%), Positives = 30/57 (52%) Frame = +2 Query: 557 RIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNV 727 R ++ S++ E + L ++ DK+HI+ + +D E + + L+K+ + L + Sbjct: 8 RSQQECIASLEKFEEEGY-LIINDVLDKEHIQRMKDALDECEERAKHLEKSTNHLTL 63 >SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3934 Score = 28.3 bits (60), Expect = 7.1 Identities = 17/67 (25%), Positives = 36/67 (53%) Frame = +3 Query: 306 EVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485 +VM + ++ G+++ ++D L S + + A E+ K ++N L+TDL + + Sbjct: 1813 DVMKMKLERVEGDDKKQKDRLFSLKSACSEANEAYEIVK---KQNLALKTDLEELKKSFA 1869 Query: 486 DQAQEIE 506 D+ E+E Sbjct: 1870 DKNMEVE 1876 >SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 347 Score = 28.3 bits (60), Expect = 7.1 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = +2 Query: 401 TGGRTRENPTRTQQGTRDRPSPASKCY*RSSTRNRILTKQTVALREVNDSRLR 559 TG + P +QGTR+R S C R ST + +TK+ LR D + R Sbjct: 298 TGEQGTGEPGTGEQGTRER---GSGCKRRWSTSDTTMTKKLANLRHHFDGQYR 347 >SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) Length = 1381 Score = 28.3 bits (60), Expect = 7.1 Identities = 17/58 (29%), Positives = 34/58 (58%) Frame = +3 Query: 342 NEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515 N+ L+ ++ R+ + D + + + LL++ KELE + + +EDQ +EIE+L+ Sbjct: 769 NDRLDNENQKLRKELADRV----DQNEILLKQVKELEKVRDEQMDDLEDQYKEIEHLK 822 >SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) Length = 1997 Score = 28.3 bits (60), Expect = 7.1 Identities = 16/67 (23%), Positives = 37/67 (55%) Frame = +2 Query: 536 EVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVD 715 +V D ++ ++ E S + L H+L + + K+ I+ L + + VE + ++ K ++ Sbjct: 909 QVKDMLEQLEDEEEASAE-LSSVKHKLEGEISDLKQDIEELDATLKKVEEEGKQKDKNIE 967 Query: 716 ELNVQLE 736 +LN +L+ Sbjct: 968 QLNEELQ 974 >SB_35649| Best HMM Match : M (HMM E-Value=6e-09) Length = 1279 Score = 27.9 bits (59), Expect = 9.4 Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Frame = +2 Query: 527 ALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAAD-KKHIKSLCSNIDTVEAKCEELQ 703 A R+ ND ++ E+L +++DL++AN DH K+ + ++ ++D + +EL Sbjct: 372 AKRDANDHVNQLQEKLGAAMRDLDKAN-----DHVNQLKEKLGAVMRDLDKANERNKELN 426 Query: 704 KTV 712 ++V Sbjct: 427 ESV 429 >SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7) Length = 504 Score = 27.9 bits (59), Expect = 9.4 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 9/75 (12%) Frame = +2 Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC---------EE 697 D + R+ ++LE + L + D A K I+S C+N + C EE Sbjct: 86 DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNFLGPKTHCHQDWFDENNEE 145 Query: 698 LQKTVDELNVQLEIY 742 + + +DE N L++Y Sbjct: 146 INRLIDEKNRLLKVY 160 >SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2735 Score = 27.9 bits (59), Expect = 9.4 Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 4/146 (2%) Frame = +2 Query: 296 NNVRSNGSGEEEIRWKRRAGARRSHLTSLYARRFATGGRTRENPTRTQQGTRDRPSPASK 475 +N +S+ E+ KR RR ++ + R T + + RTQ+ TRD S + Sbjct: 674 SNSKSSVQSSSELV-KRARTTRRLGVSRVKIRVSQTHSQPSQATARTQEVTRDAASQDAS 732 Query: 476 CY*RSST--RN-RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAA-DKK 643 + +T RN R + Q + + + I ++ EL+ QD + + + + D K Sbjct: 733 VTTQGNTSHRNTRDVMSQENTIDMTSHGTIMISKKRELTSQDANKTSKKTTKGLPSWDGK 792 Query: 644 HIKSLCSNIDTVEAKCEELQKTVDEL 721 + + N K E +K V + Sbjct: 793 ELVTSHKNKRVTSGKVESGKKEVSRI 818 >SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) Length = 1491 Score = 27.9 bits (59), Expect = 9.4 Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Frame = +2 Query: 404 GGRTRENPTRTQQGTRDRPSPASKCY*RSSTRNRILTKQTVALREVNDSRLRIYEQLELS 583 G E + +G RD + ++S R L + A E ++ + E+L + Sbjct: 885 GRSLSEELEKAVEGARDIEHDLNDKLEQTSKRYEALLDELTAKLETE--KMELQERLTKN 942 Query: 584 IQDLERANHRLAVDHAADKKHIKSLCSNI-DTVEAKCEELQKTVDELNVQLEIYRRRA 754 ++++ +H A K + SL + DTV + + ++ + + QLEI ++RA Sbjct: 943 NEEMQERMKTEFAEHLASK--VASLELKLQDTVAEEVQAYREEIKDFENQLEIEKQRA 998 >SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24) Length = 921 Score = 27.9 bits (59), Expect = 9.4 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +3 Query: 318 LVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERN--KELETDLRQHQNVIEDQ 491 LV+K EE+ Q+ L C++ AA+ + + K LET +R Q+VIE Sbjct: 158 LVQKLVPSQEEVCQNSLNLILCVITQEHKAADAAQIFHDTAGWKHLETSMRCLQSVIEGC 217 Query: 492 AQE 500 +E Sbjct: 218 GEE 220 >SB_44786| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 824 Score = 27.9 bits (59), Expect = 9.4 Identities = 15/54 (27%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Frame = +3 Query: 369 TSRRCMLDDLQLAAELGKTLLE---RNKELETDLRQHQNVIEDQAQEIEYLQSK 521 T++RC + + +A EL + ++ R E+E R + ++E++ +EIE L+++ Sbjct: 494 TNQRCAVAVVLIAGELKQAIVSMMLRKDEIEEQNRTLRQLMEEKRREIEGLRAE 547 >SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) Length = 1011 Score = 27.9 bits (59), Expect = 9.4 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Frame = +3 Query: 324 KKKFGGNEELEQDD--LTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQ 497 KK E L++ D + + ++ L L A + + + RN++L+ L++ ++ ++Q + Sbjct: 507 KKDEYATETLKRKDDIIQELKQKVETLNLKANMNE-VERRNEKLDEQLQKQKDRNDEQDE 565 Query: 498 EIEYLQSKRLLCE 536 +I L +K L CE Sbjct: 566 KINLLFAKSLECE 578 >SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) Length = 515 Score = 27.9 bits (59), Expect = 9.4 Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 7/90 (7%) Frame = +2 Query: 488 SSTRNRILTKQTVAL-REVNDSRLRIYEQLELSI---QDLERANHRLAVDHAADKKHIKS 655 S T N +L L R + D+R ++++ + + Q+LE+ + + A K+ ++ Sbjct: 46 SVTTNSLLRATICELERALKDTRRLLFQRDKDNATLRQELEKTRKDINKEQAQRKRVVEG 105 Query: 656 LCSNIDT---VEAKCEELQKTVDELNVQLE 736 + T V+ +CE+ + ++LNV++E Sbjct: 106 CEEKLKTYNEVQRRCEQFKTENEQLNVEME 135 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,711,578 Number of Sequences: 59808 Number of extensions: 464631 Number of successful extensions: 1740 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 1553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1736 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2046258890 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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