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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20944
         (754 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)               40   0.003
SB_52664| Best HMM Match : Filament (HMM E-Value=0.3)                  38   0.012
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.082
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)        32   0.43 
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)                     32   0.43 
SB_12587| Best HMM Match : DUF901 (HMM E-Value=9.9)                    32   0.43 
SB_6415| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.43 
SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12)               32   0.57 
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_29537| Best HMM Match : Ribosomal_L3 (HMM E-Value=0.61)             31   1.3  
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_17984| Best HMM Match : DUF662 (HMM E-Value=4.7)                    30   1.8  
SB_48511| Best HMM Match : Ank (HMM E-Value=4.6e-20)                   30   2.3  
SB_10277| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.3  
SB_45938| Best HMM Match : Troponin (HMM E-Value=1)                    30   2.3  
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)               30   2.3  
SB_21437| Best HMM Match : RNA_pol_Rpb6 (HMM E-Value=3)                30   2.3  
SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7)             29   3.1  
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20)                   29   3.1  
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)                   29   4.1  
SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1)                   29   4.1  
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)        29   5.4  
SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)            29   5.4  
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)             29   5.4  
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)                     29   5.4  
SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)                 29   5.4  
SB_7809| Best HMM Match : V-SNARE (HMM E-Value=2.8)                    29   5.4  
SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28)                   29   5.4  
SB_24778| Best HMM Match : DUF1409 (HMM E-Value=4.2)                   29   5.4  
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)    29   5.4  
SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036)        28   7.1  
SB_39939| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_32124| Best HMM Match : K-box (HMM E-Value=4.1)                     28   7.1  
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_51946| Best HMM Match : PhyH (HMM E-Value=0.0025)                   28   7.1  
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)                     28   7.1  
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)                 28   7.1  
SB_35649| Best HMM Match : M (HMM E-Value=6e-09)                       28   9.4  
SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7)                     28   9.4  
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   9.4  
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)         28   9.4  
SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24)                  28   9.4  
SB_44786| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)                     28   9.4  
SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)                   28   9.4  

>SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 848

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 27/47 (57%), Positives = 35/47 (74%)
 Frame = +3

Query: 387 LDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSKRL 527
           L+DL+LAAE+GK LLERNKELE  L+      E+QA + E+L SK+L
Sbjct: 290 LEDLELAAEIGKNLLERNKELEILLKSSHQFSEEQALKNEFL-SKQL 335



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 20/49 (40%), Positives = 36/49 (73%)
 Frame = +2

Query: 497 RNRILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKK 643
           +N  L+KQ   LREVN++RL+ +EQ+E++  +L++AN +L  + ++ KK
Sbjct: 327 KNEFLSKQLETLREVNENRLKAFEQMEMTAMELQKANMKLQNETSSMKK 375


>SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 569

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +3

Query: 345 EELEQDDLTSRRCMLD-DLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSK 521
           EE    D+ +     + DL LAAELGK LLE+N+EL    ++++ + E+ +Q +E L+ +
Sbjct: 60  EETNDSDVYAELAQKEKDLLLAAELGKALLEKNEELS---QKYEKLQEEFSQRVEQLEQE 116

Query: 522 R 524
           +
Sbjct: 117 K 117


>SB_52664| Best HMM Match : Filament (HMM E-Value=0.3)
          Length = 394

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 24/61 (39%), Positives = 35/61 (57%)
 Frame = +3

Query: 306 EVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485
           E  D++KK     EE         + + +D QLA ELGKTLLE+NKE E   +++Q + E
Sbjct: 2   EQEDVMKKLLALKEEATSLR-RENKALQNDCQLAGELGKTLLEQNKEWE---KKYQEMSE 57

Query: 486 D 488
           +
Sbjct: 58  E 58


>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 932

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +2

Query: 572 LELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVE----AKCEELQKTVDELNVQLEI 739
           LEL ++DLE +     V   A K+ I+S  S I+ +E    +KC  LQ+T+  L  +L  
Sbjct: 799 LELKVEDLEASIQEQLVCIKAKKEKIESYVSTIERLENESSSKCSSLQETIWGLEKELSQ 858

Query: 740 YRRR 751
           ++ +
Sbjct: 859 FKEK 862


>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
          Length = 3071

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = +2

Query: 569  QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLE 736
            QLE  I DLE AN RL  D    K  + +  + I  +E K E   K +  L  QL+
Sbjct: 1281 QLERKITDLETANERLKNDKKDLKADLIAANATITDLELKTEFSDKEIVSLKKQLD 1336


>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
          Length = 3489

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +2

Query: 542  NDSRLRIYEQLELSIQDLERAN---HRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTV 712
            +D    +  +  L   +LE+ N    +L+ D   ++   + L   +D    K E+LQKT+
Sbjct: 2989 SDLESELETERALQANELEKQNKLLEKLSADLGHERSRCEDLSEQLDIERGKVEQLQKTL 3048

Query: 713  DEL 721
            DE+
Sbjct: 3049 DEV 3051



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +2

Query: 497 RNRILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIK 652
           +N++       + E+N    R Y+++E    DLE A++  A +HA   + ++
Sbjct: 232 KNQMRQSHMAEIEEMNRKMAREYQKIESLRADLEGAHNSSAQEHAHQLQELR 283


>SB_12587| Best HMM Match : DUF901 (HMM E-Value=9.9)
          Length = 253

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +1

Query: 373 HVAVC*TICNWRPN-SGKPYSNATRNSRQTFASI---KMLLKIKHKKSNTYKANGCFARG 540
           +VAV   +  W PN  G  +S +      TF  I   + L+KIK KK +  K  GC   G
Sbjct: 8   NVAVAEWLNRWTPNLMGSSHSGSNPARNDTFFGIFFEEYLIKIKKKKKSYSKIQGC--GG 65

Query: 541 E*LKVEDL*ATG 576
             +K  DL + G
Sbjct: 66  RVVKALDLKSNG 77


>SB_6415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 82

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +1

Query: 373 HVAVC*TICNWRPN-SGKPYSNATRNSRQTFASI---KMLLKIKHKKSNTYKANGCFARG 540
           +VAV   +  W PN  G  +S +      TF  I   + L+KIK KK +  K  GC   G
Sbjct: 8   NVAVAEWLNRWTPNLMGSSHSGSNPARNDTFFGIFFEEYLIKIKKKKKSYSKIQGC--GG 65

Query: 541 E*LKVEDL*ATG 576
             +K  DL + G
Sbjct: 66  RVVKALDLKSNG 77


>SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12)
          Length = 495

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
 Frame = +3

Query: 390 DDLQLAAELGKTLLERNKELETDL----RQHQNVIEDQAQEIEYLQSKR 524
           ++L++AAELGK +L  N +++       R+H+ V+++  +EI  + + R
Sbjct: 71  EELKMAAELGKKMLAENDDIKMKYGELSREHEEVVKELDEEITRVTTDR 119


>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3213

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 596  ERANHRLAVDH--AADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
            E  NH+  +D   ++ +  I S  S  D VE +CEELQ   DEL
Sbjct: 893  ELTNHQTRIDTVLSSGQDLIDSCYSATDKVEERCEELQNLWDEL 936


>SB_29537| Best HMM Match : Ribosomal_L3 (HMM E-Value=0.61)
          Length = 261

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +1

Query: 169 FTVITRFVKFRRRYISWSPSRCALCLVYVQEYIDVSHSAINSEQ 300
           F +ITR+   R ++ S+S ++C+ C   +Q Y+D +   I+  Q
Sbjct: 13  FVLITRY---RGKHFSYSKAKCSRCTDELQTYVDCTQIRISGTQ 53


>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 694

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +1

Query: 115 IERQM*NRPVKFFSYSRSFTVITRFVKFRRRYISWSPSRCALCLVYVQEYIDVS-HSAIN 291
           I R    RP    +  +SFTVI++ V   R +    P +C +C    ++   +S H  I+
Sbjct: 452 IRRHTNERPYVCTTCGKSFTVISQLVMHNRSHTDERPYKCDICGKKFRQQGGLSIHKKIH 511

Query: 292 SEQ 300
           +E+
Sbjct: 512 TEE 514


>SB_17984| Best HMM Match : DUF662 (HMM E-Value=4.7)
          Length = 301

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
 Frame = +2

Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC--------EEL 700
           D + R+ ++LE  +  L      +  D A  K  I+S C+NI   +  C        EE+
Sbjct: 164 DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNILGPKTHCHQDWFDENEEI 223

Query: 701 QKTVDELNVQLEIY 742
            + +DE N  L++Y
Sbjct: 224 NRLIDEKNRLLKVY 237


>SB_48511| Best HMM Match : Ank (HMM E-Value=4.6e-20)
          Length = 753

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +2

Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604
           +T  R+  K+++A+RE+  SR+ I +Q+E S Q L  A
Sbjct: 354 TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 390


>SB_10277| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 48

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +2

Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604
           +T  R+  K+++A+RE+  SR+ I +Q+E S Q L  A
Sbjct: 5   TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 41


>SB_45938| Best HMM Match : Troponin (HMM E-Value=1)
          Length = 185

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
 Frame = +2

Query: 488 SSTRNRILTKQTVALREVNDSRLRIYEQLELSIQDLER--ANHRLAVDHAADKKHIKSLC 661
           S +R R+L  +    +  ND      E +E  ++D+++  +N R  V+   D+   K   
Sbjct: 56  SRSRQRVLENKLAEAKAYNDQLESEREDMEYKVKDIKKKLSNERQRVEELEDELTSKKF- 114

Query: 662 SNIDTVEAKCEELQKTVDELNVQ 730
              D+++ + E L  T+ E + Q
Sbjct: 115 -EKDSIKQEVELLSATLSETDEQ 136


>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
          Length = 1024

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/64 (28%), Positives = 35/64 (54%)
 Frame = +3

Query: 315 DLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQA 494
           ++V+     N ELE++  T R  +  DL+   +L + L E + + E DLR+  ++  ++ 
Sbjct: 459 EMVETLTDKNLELEEEVQTLRDTV-SDLEALRDLNEELEETHLQTEQDLREELDMTSNKV 517

Query: 495 QEIE 506
           +E E
Sbjct: 518 REAE 521


>SB_21437| Best HMM Match : RNA_pol_Rpb6 (HMM E-Value=3)
          Length = 112

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +2

Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604
           +T  R+  K+++A+RE+  SR+ I +Q+E S Q L  A
Sbjct: 69  TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 105


>SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7)
          Length = 434

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/84 (21%), Positives = 41/84 (48%)
 Frame = +3

Query: 288 KQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQ 467
           K+    E M  V++K       E+++      +  +L +  +  +      +E+E  +RQ
Sbjct: 219 KKKEQEEAMATVQQKLSERIRKEEEERDEMERIRLELYIEEQEERERQNEQQEMENKIRQ 278

Query: 468 HQNVIEDQAQEIEYLQSKRLLCER 539
             ++ E + Q++E+ + +RLL E+
Sbjct: 279 RLDLQETRRQQLEF-KERRLLAEQ 301


>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2672

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +3

Query: 396  LQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSKRLLCE 536
            LQLA E  KTLLE + E + +L   + ++E  A   E  +S  L CE
Sbjct: 1601 LQLAQEAKKTLLEASDERDRELEHLKEMLEYGASSSE--KSHVLACE 1645



 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +2

Query: 566  EQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLEIYR 745
            E+LE  I +L      L  +    +  +  L + +  ++++ +ELQ+ VDEL    E  R
Sbjct: 1693 ERLEAEIAELANTVETLRTELEQSQVRLSKLQTQVKELKSEKKELQRKVDELT--SEAQR 1750

Query: 746  RR 751
            RR
Sbjct: 1751 RR 1752


>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 879

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
 Frame = +3

Query: 327 KKFGGNEELEQDDLTSRRCMLDDLQLAA------ELGKTLLERNKELETDLRQHQNVIED 488
           K+   N++LE+ +  ++R    + ++AA      EL KT+    K  + +L++H+N  ++
Sbjct: 269 KQLANNKKLEEREKLAQRLERVEQEMAAKDKKISELQKTINMSEKARQRELKEHRNRYKN 328

Query: 489 QAQEIEYLQ 515
             +E++ +Q
Sbjct: 329 AKEELKKVQ 337


>SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20)
          Length = 906

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
 Frame = +2

Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC---------EE 697
           D + R+ ++LE  +  L      +  D A  K  I+S C+NI   +  C         EE
Sbjct: 186 DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNILGPKTHCHQDWFDENNEE 245

Query: 698 LQKTVDELNVQLEIY 742
           + + +DE N  L++Y
Sbjct: 246 INRLIDEKNRLLKVY 260


>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
          Length = 5087

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +3

Query: 357  QDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQE 500
            +++ T R  +LD +Q   E     L++NKEL+T L + +      ++E
Sbjct: 4427 EEEATDRASLLDSIQGDKETISRALKQNKELKTQLEEIEKRFVKMSEE 4474


>SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1)
          Length = 505

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 131 YICRSMSVSNGCSMYASCVS 72
           Y C S  V+N CS+Y +CVS
Sbjct: 202 YNCESCQVNNCCSIYENCVS 221


>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
          Length = 2122

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
 Frame = +2

Query: 569 QLELSIQDLERANHRLAVDHAADKK------HIKSLC-SNIDTVEAKCEELQKTVDELNV 727
           + E    DLE+AN+RL+ +    +K      + +SL  +  +TVEA+ + LQK ++E N 
Sbjct: 778 ETERKCHDLEQANNRLSRERDECRKDWIEASNQRSLFETRAETVEAERKSLQKQLEEANR 837

Query: 728 QL 733
           +L
Sbjct: 838 KL 839


>SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)
          Length = 520

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +2

Query: 578 LSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLEIYRRRA 754
           ++ +D   A HRL V+H   K+  +  C +        EE Q+ +D LN QL   R RA
Sbjct: 173 MTAEDFLEAYHRLVVEHQLAKEEQEDRCDD--------EEFQE-IDSLNQQLTERRARA 222


>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2520

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +2

Query: 509 LTKQTVALREVNDSRLRIYE-QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEA 685
           L K+ + LRE  D +L + + + E+ +Q +E        +     +  + L        A
Sbjct: 576 LEKKLLELREETDKKLEVTKKEAEIKVQSVEEQLSSQKAEELLVMQSERELGEK--AAMA 633

Query: 686 KCEELQKTVDELNVQLE 736
           +CEE +K  +ELN  L+
Sbjct: 634 QCEEYKKKNNELNEALQ 650


>SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)
          Length = 712

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 509 LTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSL 658
           L +    L++ N+S  R     E   +DLER+N R+A D +A K+ ++ L
Sbjct: 644 LEQHIETLKQQNNSLQRNNSSFEGEKRDLERSNVRIAKDVSALKRTLERL 693


>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 482

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = +3

Query: 342 NEELEQDDLTSRRCMLDDLQLAAE--LGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515
           N + +Q++L ++  +L+D+Q   E    KTL  RNK+ E ++   +     + +  E  +
Sbjct: 150 NLQKQQEELRNK--ILEDVQALQEDERNKTLQVRNKQREVEIEHREYAARAERKMREVEE 207

Query: 516 SKRLLCE 536
            +RL+ E
Sbjct: 208 RQRLIAE 214


>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
          Length = 1312

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +3

Query: 315 DLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQA 494
           +L K  + G  E E D +T  + + +D Q        L  +NKEL +D+ + Q  +ED A
Sbjct: 141 ELNKALYAGGSEYESDTMT--KSIREDNQT------DLRRKNKELRSDVEELQEQVEDMA 192


>SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)
          Length = 948

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 503 RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNI 670
           RI  K  +A+R  N SR        L ++   + N R  +  +   +H+K +C N+
Sbjct: 775 RICGKVFLAVRPSNKSREYAERSFWLFVRPTSQENMRECLSGSPSVQHVKRICGNV 830


>SB_7809| Best HMM Match : V-SNARE (HMM E-Value=2.8)
          Length = 116

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/79 (26%), Positives = 34/79 (43%)
 Frame = +3

Query: 285 HKQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLR 464
           H +   + V D+ +     NE LEQ DL +R     +    +   KT     K+ + DL+
Sbjct: 30  HGEAKRNTVADVERSFEEANELLEQMDLEAREITGPEKSKLSNRLKTYKNEMKKFKDDLK 89

Query: 465 QHQNVIEDQAQEIEYLQSK 521
           + +    DQ    E L S+
Sbjct: 90  KARIAFSDQEGRNELLDSE 108


>SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28)
          Length = 558

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
 Frame = +2

Query: 509 LTKQTVALREVNDSRLRIYEQLELSIQDLE----RANHRLAVDHAADKKHIKSLCSNIDT 676
           LTK+  + + + +    + + L+ + ++ E    + N     DH   +  +K      D 
Sbjct: 51  LTKENNSFKGITEENKNLKQMLDCTERNFEAELRQINDAAKADHEVMENALKDAMRQHDE 110

Query: 677 VEAKCEELQKTVDELN 724
             A+ +E  KT+D+L+
Sbjct: 111 TVARLQETTKTLDDLS 126


>SB_24778| Best HMM Match : DUF1409 (HMM E-Value=4.2)
          Length = 74

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
 Frame = +2

Query: 554 LRIYEQLELSIQDLERANHRLAVD-------HAADKKHIKSLCSNIDTVEAKCEELQKTV 712
           +R  ++LE +++ +ER N ++  D       H  DK+ +     NI TVE   +EL  T 
Sbjct: 3   VREKDKLEDNLKQMERINTKITKDLKDVQEKHKTDKEELVKCKKNIKTVE---QELATTK 59

Query: 713 DELNVQL 733
            +LN  L
Sbjct: 60  HQLNEML 66


>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
          Length = 4160

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/74 (22%), Positives = 36/74 (48%)
 Frame = +2

Query: 503  RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVE 682
            R+ T + + L+ V+++  +   Q+E  +Q+   A  RLA     ++K  + L      ++
Sbjct: 1729 RVTTDELIRLKPVSEATQKKKGQVETELQN---ARKRLATLETTERKSEEELAKANHEIQ 1785

Query: 683  AKCEELQKTVDELN 724
               +E+ +   ELN
Sbjct: 1786 VSKDEISRLETELN 1799


>SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036)
          Length = 1211

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +3

Query: 309 VMDLVKKKFGGNEELEQDDLTSRRCMLDDLQL-AAELGKTLLERNKELETDLRQHQNVIE 485
           ++D  KK  GGN    Q     RRC   + ++ A  L +  +ER K +E D ++ Q   E
Sbjct: 266 MLDKEKKVGGGNNVALQ-----RRCEELEHEINALRLEEAEMERLKAVEVDYKKLQKQQE 320

Query: 486 DQAQEIEYLQSKRLLCE 536
           D  +E+E    K LL E
Sbjct: 321 DIQRELE---DKELLAE 334


>SB_39939| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 92

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 291 Q*TMSEVMDLVKKKFGGNEELEQDD 365
           Q T  E+ DL KK F GN++ + DD
Sbjct: 14  QNTPPELKDLAKKNFNGNDDDDNDD 38


>SB_32124| Best HMM Match : K-box (HMM E-Value=4.1)
          Length = 207

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +3

Query: 342 NEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515
           N+ L+ ++   R+ + D +    +  + LL++ KELE    +  + +EDQ +EIE+L+
Sbjct: 32  NDRLDNENQKLRKELADRV----DQNEILLKQVKELEKVRDEQMDDLEDQYKEIEHLK 85


>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2848

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
 Frame = +2

Query: 509  LTKQTVALREVND---SRLRIYEQ---LELSIQDLERANHRLA-VDH--AADKKHIKSLC 661
            L K+  +LRE N    S L + E+   L L+ +++E    +L  V+   A +K+    L 
Sbjct: 2268 LEKEVSSLREANQVQQSTLTMTEKGGHLSLAQREVEHRKSQLERVEEKLALEKEQNAKLS 2327

Query: 662  SNIDTVEAKCEELQKTVDELNVQLE 736
            S +DT + K + L    D L  QLE
Sbjct: 2328 SRLDTKDEKLQTLISECDSLKRQLE 2352


>SB_51946| Best HMM Match : PhyH (HMM E-Value=0.0025)
          Length = 230

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/57 (22%), Positives = 30/57 (52%)
 Frame = +2

Query: 557 RIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNV 727
           R  ++   S++  E   + L ++   DK+HI+ +   +D  E + + L+K+ + L +
Sbjct: 8   RSQQECIASLEKFEEEGY-LIINDVLDKEHIQRMKDALDECEERAKHLEKSTNHLTL 63


>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3934

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/67 (25%), Positives = 36/67 (53%)
 Frame = +3

Query: 306  EVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485
            +VM +  ++  G+++ ++D L S +    +   A E+ K   ++N  L+TDL + +    
Sbjct: 1813 DVMKMKLERVEGDDKKQKDRLFSLKSACSEANEAYEIVK---KQNLALKTDLEELKKSFA 1869

Query: 486  DQAQEIE 506
            D+  E+E
Sbjct: 1870 DKNMEVE 1876


>SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 347

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +2

Query: 401 TGGRTRENPTRTQQGTRDRPSPASKCY*RSSTRNRILTKQTVALREVNDSRLR 559
           TG +    P   +QGTR+R    S C  R ST +  +TK+   LR   D + R
Sbjct: 298 TGEQGTGEPGTGEQGTRER---GSGCKRRWSTSDTTMTKKLANLRHHFDGQYR 347


>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
          Length = 1381

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +3

Query: 342 NEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515
           N+ L+ ++   R+ + D +    +  + LL++ KELE    +  + +EDQ +EIE+L+
Sbjct: 769 NDRLDNENQKLRKELADRV----DQNEILLKQVKELEKVRDEQMDDLEDQYKEIEHLK 822


>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
          Length = 1997

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/67 (23%), Positives = 37/67 (55%)
 Frame = +2

Query: 536  EVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVD 715
            +V D   ++ ++ E S + L    H+L  + +  K+ I+ L + +  VE + ++  K ++
Sbjct: 909  QVKDMLEQLEDEEEASAE-LSSVKHKLEGEISDLKQDIEELDATLKKVEEEGKQKDKNIE 967

Query: 716  ELNVQLE 736
            +LN +L+
Sbjct: 968  QLNEELQ 974


>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
          Length = 1279

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 527 ALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAAD-KKHIKSLCSNIDTVEAKCEELQ 703
           A R+ ND   ++ E+L  +++DL++AN     DH    K+ + ++  ++D    + +EL 
Sbjct: 372 AKRDANDHVNQLQEKLGAAMRDLDKAN-----DHVNQLKEKLGAVMRDLDKANERNKELN 426

Query: 704 KTV 712
           ++V
Sbjct: 427 ESV 429


>SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7)
          Length = 504

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
 Frame = +2

Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC---------EE 697
           D + R+ ++LE  +  L      +  D A  K  I+S C+N    +  C         EE
Sbjct: 86  DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNFLGPKTHCHQDWFDENNEE 145

Query: 698 LQKTVDELNVQLEIY 742
           + + +DE N  L++Y
Sbjct: 146 INRLIDEKNRLLKVY 160


>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2735

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
 Frame = +2

Query: 296  NNVRSNGSGEEEIRWKRRAGARRSHLTSLYARRFATGGRTRENPTRTQQGTRDRPSPASK 475
            +N +S+     E+  KR    RR  ++ +  R   T  +  +   RTQ+ TRD  S  + 
Sbjct: 674  SNSKSSVQSSSELV-KRARTTRRLGVSRVKIRVSQTHSQPSQATARTQEVTRDAASQDAS 732

Query: 476  CY*RSST--RN-RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAA-DKK 643
               + +T  RN R +  Q   +   +   + I ++ EL+ QD  + + +      + D K
Sbjct: 733  VTTQGNTSHRNTRDVMSQENTIDMTSHGTIMISKKRELTSQDANKTSKKTTKGLPSWDGK 792

Query: 644  HIKSLCSNIDTVEAKCEELQKTVDEL 721
             + +   N      K E  +K V  +
Sbjct: 793  ELVTSHKNKRVTSGKVESGKKEVSRI 818


>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
          Length = 1491

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
 Frame = +2

Query: 404  GGRTRENPTRTQQGTRDRPSPASKCY*RSSTRNRILTKQTVALREVNDSRLRIYEQLELS 583
            G    E   +  +G RD     +    ++S R   L  +  A  E    ++ + E+L  +
Sbjct: 885  GRSLSEELEKAVEGARDIEHDLNDKLEQTSKRYEALLDELTAKLETE--KMELQERLTKN 942

Query: 584  IQDLERANHRLAVDHAADKKHIKSLCSNI-DTVEAKCEELQKTVDELNVQLEIYRRRA 754
             ++++        +H A K  + SL   + DTV  + +  ++ + +   QLEI ++RA
Sbjct: 943  NEEMQERMKTEFAEHLASK--VASLELKLQDTVAEEVQAYREEIKDFENQLEIEKQRA 998


>SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24)
          Length = 921

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 318 LVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERN--KELETDLRQHQNVIEDQ 491
           LV+K     EE+ Q+ L    C++     AA+  +   +    K LET +R  Q+VIE  
Sbjct: 158 LVQKLVPSQEEVCQNSLNLILCVITQEHKAADAAQIFHDTAGWKHLETSMRCLQSVIEGC 217

Query: 492 AQE 500
            +E
Sbjct: 218 GEE 220


>SB_44786| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 824

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/54 (27%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +3

Query: 369 TSRRCMLDDLQLAAELGKTLLE---RNKELETDLRQHQNVIEDQAQEIEYLQSK 521
           T++RC +  + +A EL + ++    R  E+E   R  + ++E++ +EIE L+++
Sbjct: 494 TNQRCAVAVVLIAGELKQAIVSMMLRKDEIEEQNRTLRQLMEEKRREIEGLRAE 547


>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
          Length = 1011

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
 Frame = +3

Query: 324 KKKFGGNEELEQDD--LTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQ 497
           KK     E L++ D  +   +  ++ L L A + + +  RN++L+  L++ ++  ++Q +
Sbjct: 507 KKDEYATETLKRKDDIIQELKQKVETLNLKANMNE-VERRNEKLDEQLQKQKDRNDEQDE 565

Query: 498 EIEYLQSKRLLCE 536
           +I  L +K L CE
Sbjct: 566 KINLLFAKSLECE 578


>SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)
          Length = 515

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
 Frame = +2

Query: 488 SSTRNRILTKQTVAL-REVNDSRLRIYEQLELSI---QDLERANHRLAVDHAADKKHIKS 655
           S T N +L      L R + D+R  ++++ + +    Q+LE+    +  + A  K+ ++ 
Sbjct: 46  SVTTNSLLRATICELERALKDTRRLLFQRDKDNATLRQELEKTRKDINKEQAQRKRVVEG 105

Query: 656 LCSNIDT---VEAKCEELQKTVDELNVQLE 736
               + T   V+ +CE+ +   ++LNV++E
Sbjct: 106 CEEKLKTYNEVQRRCEQFKTENEQLNVEME 135


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,711,578
Number of Sequences: 59808
Number of extensions: 464631
Number of successful extensions: 1740
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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