Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20944
(754 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_52664| Best HMM Match : Filament (HMM E-Value=0.3) 38 0.012
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 32 0.43
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 32 0.43
SB_12587| Best HMM Match : DUF901 (HMM E-Value=9.9) 32 0.43
SB_6415| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12) 32 0.57
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_29537| Best HMM Match : Ribosomal_L3 (HMM E-Value=0.61) 31 1.3
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_17984| Best HMM Match : DUF662 (HMM E-Value=4.7) 30 1.8
SB_48511| Best HMM Match : Ank (HMM E-Value=4.6e-20) 30 2.3
SB_10277| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_45938| Best HMM Match : Troponin (HMM E-Value=1) 30 2.3
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 30 2.3
SB_21437| Best HMM Match : RNA_pol_Rpb6 (HMM E-Value=3) 30 2.3
SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7) 29 3.1
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20) 29 3.1
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 4.1
SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1) 29 4.1
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 5.4
SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) 29 5.4
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09) 29 5.4
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 29 5.4
SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10) 29 5.4
SB_7809| Best HMM Match : V-SNARE (HMM E-Value=2.8) 29 5.4
SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28) 29 5.4
SB_24778| Best HMM Match : DUF1409 (HMM E-Value=4.2) 29 5.4
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 5.4
SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036) 28 7.1
SB_39939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_32124| Best HMM Match : K-box (HMM E-Value=4.1) 28 7.1
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_51946| Best HMM Match : PhyH (HMM E-Value=0.0025) 28 7.1
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 28 7.1
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 28 7.1
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 28 9.4
SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7) 28 9.4
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 28 9.4
SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24) 28 9.4
SB_44786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 28 9.4
SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 28 9.4
>SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +3
Query: 387 LDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSKRL 527
L+DL+LAAE+GK LLERNKELE L+ E+QA + E+L SK+L
Sbjct: 290 LEDLELAAEIGKNLLERNKELEILLKSSHQFSEEQALKNEFL-SKQL 335
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/49 (40%), Positives = 36/49 (73%)
Frame = +2
Query: 497 RNRILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKK 643
+N L+KQ LREVN++RL+ +EQ+E++ +L++AN +L + ++ KK
Sbjct: 327 KNEFLSKQLETLREVNENRLKAFEQMEMTAMELQKANMKLQNETSSMKK 375
>SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3
Query: 345 EELEQDDLTSRRCMLD-DLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSK 521
EE D+ + + DL LAAELGK LLE+N+EL ++++ + E+ +Q +E L+ +
Sbjct: 60 EETNDSDVYAELAQKEKDLLLAAELGKALLEKNEELS---QKYEKLQEEFSQRVEQLEQE 116
Query: 522 R 524
+
Sbjct: 117 K 117
>SB_52664| Best HMM Match : Filament (HMM E-Value=0.3)
Length = 394
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3
Query: 306 EVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485
E D++KK EE + + +D QLA ELGKTLLE+NKE E +++Q + E
Sbjct: 2 EQEDVMKKLLALKEEATSLR-RENKALQNDCQLAGELGKTLLEQNKEWE---KKYQEMSE 57
Query: 486 D 488
+
Sbjct: 58 E 58
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 572 LELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVE----AKCEELQKTVDELNVQLEI 739
LEL ++DLE + V A K+ I+S S I+ +E +KC LQ+T+ L +L
Sbjct: 799 LELKVEDLEASIQEQLVCIKAKKEKIESYVSTIERLENESSSKCSSLQETIWGLEKELSQ 858
Query: 740 YRRR 751
++ +
Sbjct: 859 FKEK 862
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +2
Query: 569 QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLE 736
QLE I DLE AN RL D K + + + I +E K E K + L QL+
Sbjct: 1281 QLERKITDLETANERLKNDKKDLKADLIAANATITDLELKTEFSDKEIVSLKKQLD 1336
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 542 NDSRLRIYEQLELSIQDLERAN---HRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTV 712
+D + + L +LE+ N +L+ D ++ + L +D K E+LQKT+
Sbjct: 2989 SDLESELETERALQANELEKQNKLLEKLSADLGHERSRCEDLSEQLDIERGKVEQLQKTL 3048
Query: 713 DEL 721
DE+
Sbjct: 3049 DEV 3051
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +2
Query: 497 RNRILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIK 652
+N++ + E+N R Y+++E DLE A++ A +HA + ++
Sbjct: 232 KNQMRQSHMAEIEEMNRKMAREYQKIESLRADLEGAHNSSAQEHAHQLQELR 283
>SB_12587| Best HMM Match : DUF901 (HMM E-Value=9.9)
Length = 253
Score = 32.3 bits (70), Expect = 0.43
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 373 HVAVC*TICNWRPN-SGKPYSNATRNSRQTFASI---KMLLKIKHKKSNTYKANGCFARG 540
+VAV + W PN G +S + TF I + L+KIK KK + K GC G
Sbjct: 8 NVAVAEWLNRWTPNLMGSSHSGSNPARNDTFFGIFFEEYLIKIKKKKKSYSKIQGC--GG 65
Query: 541 E*LKVEDL*ATG 576
+K DL + G
Sbjct: 66 RVVKALDLKSNG 77
>SB_6415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 32.3 bits (70), Expect = 0.43
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 373 HVAVC*TICNWRPN-SGKPYSNATRNSRQTFASI---KMLLKIKHKKSNTYKANGCFARG 540
+VAV + W PN G +S + TF I + L+KIK KK + K GC G
Sbjct: 8 NVAVAEWLNRWTPNLMGSSHSGSNPARNDTFFGIFFEEYLIKIKKKKKSYSKIQGC--GG 65
Query: 541 E*LKVEDL*ATG 576
+K DL + G
Sbjct: 66 RVVKALDLKSNG 77
>SB_22025| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.12)
Length = 495
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/49 (30%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = +3
Query: 390 DDLQLAAELGKTLLERNKELETDL----RQHQNVIEDQAQEIEYLQSKR 524
++L++AAELGK +L N +++ R+H+ V+++ +EI + + R
Sbjct: 71 EELKMAAELGKKMLAENDDIKMKYGELSREHEEVVKELDEEITRVTTDR 119
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 596 ERANHRLAVDH--AADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
E NH+ +D ++ + I S S D VE +CEELQ DEL
Sbjct: 893 ELTNHQTRIDTVLSSGQDLIDSCYSATDKVEERCEELQNLWDEL 936
>SB_29537| Best HMM Match : Ribosomal_L3 (HMM E-Value=0.61)
Length = 261
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 169 FTVITRFVKFRRRYISWSPSRCALCLVYVQEYIDVSHSAINSEQ 300
F +ITR+ R ++ S+S ++C+ C +Q Y+D + I+ Q
Sbjct: 13 FVLITRY---RGKHFSYSKAKCSRCTDELQTYVDCTQIRISGTQ 53
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 115 IERQM*NRPVKFFSYSRSFTVITRFVKFRRRYISWSPSRCALCLVYVQEYIDVS-HSAIN 291
I R RP + +SFTVI++ V R + P +C +C ++ +S H I+
Sbjct: 452 IRRHTNERPYVCTTCGKSFTVISQLVMHNRSHTDERPYKCDICGKKFRQQGGLSIHKKIH 511
Query: 292 SEQ 300
+E+
Sbjct: 512 TEE 514
>SB_17984| Best HMM Match : DUF662 (HMM E-Value=4.7)
Length = 301
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = +2
Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC--------EEL 700
D + R+ ++LE + L + D A K I+S C+NI + C EE+
Sbjct: 164 DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNILGPKTHCHQDWFDENEEI 223
Query: 701 QKTVDELNVQLEIY 742
+ +DE N L++Y
Sbjct: 224 NRLIDEKNRLLKVY 237
>SB_48511| Best HMM Match : Ank (HMM E-Value=4.6e-20)
Length = 753
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604
+T R+ K+++A+RE+ SR+ I +Q+E S Q L A
Sbjct: 354 TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 390
>SB_10277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604
+T R+ K+++A+RE+ SR+ I +Q+E S Q L A
Sbjct: 5 TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 41
>SB_45938| Best HMM Match : Troponin (HMM E-Value=1)
Length = 185
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +2
Query: 488 SSTRNRILTKQTVALREVNDSRLRIYEQLELSIQDLER--ANHRLAVDHAADKKHIKSLC 661
S +R R+L + + ND E +E ++D+++ +N R V+ D+ K
Sbjct: 56 SRSRQRVLENKLAEAKAYNDQLESEREDMEYKVKDIKKKLSNERQRVEELEDELTSKKF- 114
Query: 662 SNIDTVEAKCEELQKTVDELNVQ 730
D+++ + E L T+ E + Q
Sbjct: 115 -EKDSIKQEVELLSATLSETDEQ 136
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 315 DLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQA 494
++V+ N ELE++ T R + DL+ +L + L E + + E DLR+ ++ ++
Sbjct: 459 EMVETLTDKNLELEEEVQTLRDTV-SDLEALRDLNEELEETHLQTEQDLREELDMTSNKV 517
Query: 495 QEIE 506
+E E
Sbjct: 518 REAE 521
>SB_21437| Best HMM Match : RNA_pol_Rpb6 (HMM E-Value=3)
Length = 112
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 491 STRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERA 604
+T R+ K+++A+RE+ SR+ I +Q+E S Q L A
Sbjct: 69 TTEKRMEQKKSIAIREIERSRVEILKQIE-SYQGLSAA 105
>SB_17268| Best HMM Match : Ribosomal_L29 (HMM E-Value=1.7)
Length = 434
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/84 (21%), Positives = 41/84 (48%)
Frame = +3
Query: 288 KQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQ 467
K+ E M V++K E+++ + +L + + + +E+E +RQ
Sbjct: 219 KKKEQEEAMATVQQKLSERIRKEEEERDEMERIRLELYIEEQEERERQNEQQEMENKIRQ 278
Query: 468 HQNVIEDQAQEIEYLQSKRLLCER 539
++ E + Q++E+ + +RLL E+
Sbjct: 279 RLDLQETRRQQLEF-KERRLLAEQ 301
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 396 LQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSKRLLCE 536
LQLA E KTLLE + E + +L + ++E A E +S L CE
Sbjct: 1601 LQLAQEAKKTLLEASDERDRELEHLKEMLEYGASSSE--KSHVLACE 1645
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 566 EQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLEIYR 745
E+LE I +L L + + + L + + ++++ +ELQ+ VDEL E R
Sbjct: 1693 ERLEAEIAELANTVETLRTELEQSQVRLSKLQTQVKELKSEKKELQRKVDELT--SEAQR 1750
Query: 746 RR 751
RR
Sbjct: 1751 RR 1752
>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/69 (24%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Frame = +3
Query: 327 KKFGGNEELEQDDLTSRRCMLDDLQLAA------ELGKTLLERNKELETDLRQHQNVIED 488
K+ N++LE+ + ++R + ++AA EL KT+ K + +L++H+N ++
Sbjct: 269 KQLANNKKLEEREKLAQRLERVEQEMAAKDKKISELQKTINMSEKARQRELKEHRNRYKN 328
Query: 489 QAQEIEYLQ 515
+E++ +Q
Sbjct: 329 AKEELKKVQ 337
>SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20)
Length = 906
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = +2
Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC---------EE 697
D + R+ ++LE + L + D A K I+S C+NI + C EE
Sbjct: 186 DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNILGPKTHCHQDWFDENNEE 245
Query: 698 LQKTVDELNVQLEIY 742
+ + +DE N L++Y
Sbjct: 246 INRLIDEKNRLLKVY 260
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 357 QDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQE 500
+++ T R +LD +Q E L++NKEL+T L + + ++E
Sbjct: 4427 EEEATDRASLLDSIQGDKETISRALKQNKELKTQLEEIEKRFVKMSEE 4474
>SB_12773| Best HMM Match : DUF1480 (HMM E-Value=2.1)
Length = 505
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 131 YICRSMSVSNGCSMYASCVS 72
Y C S V+N CS+Y +CVS
Sbjct: 202 YNCESCQVNNCCSIYENCVS 221
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Frame = +2
Query: 569 QLELSIQDLERANHRLAVDHAADKK------HIKSLC-SNIDTVEAKCEELQKTVDELNV 727
+ E DLE+AN+RL+ + +K + +SL + +TVEA+ + LQK ++E N
Sbjct: 778 ETERKCHDLEQANNRLSRERDECRKDWIEASNQRSLFETRAETVEAERKSLQKQLEEANR 837
Query: 728 QL 733
+L
Sbjct: 838 KL 839
>SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)
Length = 520
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 578 LSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLEIYRRRA 754
++ +D A HRL V+H K+ + C + EE Q+ +D LN QL R RA
Sbjct: 173 MTAEDFLEAYHRLVVEHQLAKEEQEDRCDD--------EEFQE-IDSLNQQLTERRARA 222
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 LTKQTVALREVNDSRLRIYE-QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEA 685
L K+ + LRE D +L + + + E+ +Q +E + + + L A
Sbjct: 576 LEKKLLELREETDKKLEVTKKEAEIKVQSVEEQLSSQKAEELLVMQSERELGEK--AAMA 633
Query: 686 KCEELQKTVDELNVQLE 736
+CEE +K +ELN L+
Sbjct: 634 QCEEYKKKNNELNEALQ 650
>SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)
Length = 712
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +2
Query: 509 LTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSL 658
L + L++ N+S R E +DLER+N R+A D +A K+ ++ L
Sbjct: 644 LEQHIETLKQQNNSLQRNNSSFEGEKRDLERSNVRIAKDVSALKRTLERL 693
>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 342 NEELEQDDLTSRRCMLDDLQLAAE--LGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515
N + +Q++L ++ +L+D+Q E KTL RNK+ E ++ + + + E +
Sbjct: 150 NLQKQQEELRNK--ILEDVQALQEDERNKTLQVRNKQREVEIEHREYAARAERKMREVEE 207
Query: 516 SKRLLCE 536
+RL+ E
Sbjct: 208 RQRLIAE 214
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 315 DLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQA 494
+L K + G E E D +T + + +D Q L +NKEL +D+ + Q +ED A
Sbjct: 141 ELNKALYAGGSEYESDTMT--KSIREDNQT------DLRRKNKELRSDVEELQEQVEDMA 192
>SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)
Length = 948
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 503 RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNI 670
RI K +A+R N SR L ++ + N R + + +H+K +C N+
Sbjct: 775 RICGKVFLAVRPSNKSREYAERSFWLFVRPTSQENMRECLSGSPSVQHVKRICGNV 830
>SB_7809| Best HMM Match : V-SNARE (HMM E-Value=2.8)
Length = 116
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +3
Query: 285 HKQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLR 464
H + + V D+ + NE LEQ DL +R + + KT K+ + DL+
Sbjct: 30 HGEAKRNTVADVERSFEEANELLEQMDLEAREITGPEKSKLSNRLKTYKNEMKKFKDDLK 89
Query: 465 QHQNVIEDQAQEIEYLQSK 521
+ + DQ E L S+
Sbjct: 90 KARIAFSDQEGRNELLDSE 108
>SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28)
Length = 558
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +2
Query: 509 LTKQTVALREVNDSRLRIYEQLELSIQDLE----RANHRLAVDHAADKKHIKSLCSNIDT 676
LTK+ + + + + + + L+ + ++ E + N DH + +K D
Sbjct: 51 LTKENNSFKGITEENKNLKQMLDCTERNFEAELRQINDAAKADHEVMENALKDAMRQHDE 110
Query: 677 VEAKCEELQKTVDELN 724
A+ +E KT+D+L+
Sbjct: 111 TVARLQETTKTLDDLS 126
>SB_24778| Best HMM Match : DUF1409 (HMM E-Value=4.2)
Length = 74
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +2
Query: 554 LRIYEQLELSIQDLERANHRLAVD-------HAADKKHIKSLCSNIDTVEAKCEELQKTV 712
+R ++LE +++ +ER N ++ D H DK+ + NI TVE +EL T
Sbjct: 3 VREKDKLEDNLKQMERINTKITKDLKDVQEKHKTDKEELVKCKKNIKTVE---QELATTK 59
Query: 713 DELNVQL 733
+LN L
Sbjct: 60 HQLNEML 66
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +2
Query: 503 RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVE 682
R+ T + + L+ V+++ + Q+E +Q+ A RLA ++K + L ++
Sbjct: 1729 RVTTDELIRLKPVSEATQKKKGQVETELQN---ARKRLATLETTERKSEEELAKANHEIQ 1785
Query: 683 AKCEELQKTVDELN 724
+E+ + ELN
Sbjct: 1786 VSKDEISRLETELN 1799
>SB_55733| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00036)
Length = 1211
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 309 VMDLVKKKFGGNEELEQDDLTSRRCMLDDLQL-AAELGKTLLERNKELETDLRQHQNVIE 485
++D KK GGN Q RRC + ++ A L + +ER K +E D ++ Q E
Sbjct: 266 MLDKEKKVGGGNNVALQ-----RRCEELEHEINALRLEEAEMERLKAVEVDYKKLQKQQE 320
Query: 486 DQAQEIEYLQSKRLLCE 536
D +E+E K LL E
Sbjct: 321 DIQRELE---DKELLAE 334
>SB_39939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 291 Q*TMSEVMDLVKKKFGGNEELEQDD 365
Q T E+ DL KK F GN++ + DD
Sbjct: 14 QNTPPELKDLAKKNFNGNDDDDNDD 38
>SB_32124| Best HMM Match : K-box (HMM E-Value=4.1)
Length = 207
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +3
Query: 342 NEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515
N+ L+ ++ R+ + D + + + LL++ KELE + + +EDQ +EIE+L+
Sbjct: 32 NDRLDNENQKLRKELADRV----DQNEILLKQVKELEKVRDEQMDDLEDQYKEIEHLK 85
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.3 bits (60), Expect = 7.1
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Frame = +2
Query: 509 LTKQTVALREVND---SRLRIYEQ---LELSIQDLERANHRLA-VDH--AADKKHIKSLC 661
L K+ +LRE N S L + E+ L L+ +++E +L V+ A +K+ L
Sbjct: 2268 LEKEVSSLREANQVQQSTLTMTEKGGHLSLAQREVEHRKSQLERVEEKLALEKEQNAKLS 2327
Query: 662 SNIDTVEAKCEELQKTVDELNVQLE 736
S +DT + K + L D L QLE
Sbjct: 2328 SRLDTKDEKLQTLISECDSLKRQLE 2352
>SB_51946| Best HMM Match : PhyH (HMM E-Value=0.0025)
Length = 230
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/57 (22%), Positives = 30/57 (52%)
Frame = +2
Query: 557 RIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNV 727
R ++ S++ E + L ++ DK+HI+ + +D E + + L+K+ + L +
Sbjct: 8 RSQQECIASLEKFEEEGY-LIINDVLDKEHIQRMKDALDECEERAKHLEKSTNHLTL 63
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/67 (25%), Positives = 36/67 (53%)
Frame = +3
Query: 306 EVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485
+VM + ++ G+++ ++D L S + + A E+ K ++N L+TDL + +
Sbjct: 1813 DVMKMKLERVEGDDKKQKDRLFSLKSACSEANEAYEIVK---KQNLALKTDLEELKKSFA 1869
Query: 486 DQAQEIE 506
D+ E+E
Sbjct: 1870 DKNMEVE 1876
>SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 401 TGGRTRENPTRTQQGTRDRPSPASKCY*RSSTRNRILTKQTVALREVNDSRLR 559
TG + P +QGTR+R S C R ST + +TK+ LR D + R
Sbjct: 298 TGEQGTGEPGTGEQGTRER---GSGCKRRWSTSDTTMTKKLANLRHHFDGQYR 347
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +3
Query: 342 NEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQ 515
N+ L+ ++ R+ + D + + + LL++ KELE + + +EDQ +EIE+L+
Sbjct: 769 NDRLDNENQKLRKELADRV----DQNEILLKQVKELEKVRDEQMDDLEDQYKEIEHLK 822
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +2
Query: 536 EVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVD 715
+V D ++ ++ E S + L H+L + + K+ I+ L + + VE + ++ K ++
Sbjct: 909 QVKDMLEQLEDEEEASAE-LSSVKHKLEGEISDLKQDIEELDATLKKVEEEGKQKDKNIE 967
Query: 716 ELNVQLE 736
+LN +L+
Sbjct: 968 QLNEELQ 974
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 527 ALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAAD-KKHIKSLCSNIDTVEAKCEELQ 703
A R+ ND ++ E+L +++DL++AN DH K+ + ++ ++D + +EL
Sbjct: 372 AKRDANDHVNQLQEKLGAAMRDLDKAN-----DHVNQLKEKLGAVMRDLDKANERNKELN 426
Query: 704 KTV 712
++V
Sbjct: 427 ESV 429
>SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7)
Length = 504
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Frame = +2
Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKC---------EE 697
D + R+ ++LE + L + D A K I+S C+N + C EE
Sbjct: 86 DVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNFLGPKTHCHQDWFDENNEE 145
Query: 698 LQKTVDELNVQLEIY 742
+ + +DE N L++Y
Sbjct: 146 INRLIDEKNRLLKVY 160
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 9.4
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Frame = +2
Query: 296 NNVRSNGSGEEEIRWKRRAGARRSHLTSLYARRFATGGRTRENPTRTQQGTRDRPSPASK 475
+N +S+ E+ KR RR ++ + R T + + RTQ+ TRD S +
Sbjct: 674 SNSKSSVQSSSELV-KRARTTRRLGVSRVKIRVSQTHSQPSQATARTQEVTRDAASQDAS 732
Query: 476 CY*RSST--RN-RILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAA-DKK 643
+ +T RN R + Q + + + I ++ EL+ QD + + + + D K
Sbjct: 733 VTTQGNTSHRNTRDVMSQENTIDMTSHGTIMISKKRELTSQDANKTSKKTTKGLPSWDGK 792
Query: 644 HIKSLCSNIDTVEAKCEELQKTVDEL 721
+ + N K E +K V +
Sbjct: 793 ELVTSHKNKRVTSGKVESGKKEVSRI 818
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 27.9 bits (59), Expect = 9.4
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +2
Query: 404 GGRTRENPTRTQQGTRDRPSPASKCY*RSSTRNRILTKQTVALREVNDSRLRIYEQLELS 583
G E + +G RD + ++S R L + A E ++ + E+L +
Sbjct: 885 GRSLSEELEKAVEGARDIEHDLNDKLEQTSKRYEALLDELTAKLETE--KMELQERLTKN 942
Query: 584 IQDLERANHRLAVDHAADKKHIKSLCSNI-DTVEAKCEELQKTVDELNVQLEIYRRRA 754
++++ +H A K + SL + DTV + + ++ + + QLEI ++RA
Sbjct: 943 NEEMQERMKTEFAEHLASK--VASLELKLQDTVAEEVQAYREEIKDFENQLEIEKQRA 998
>SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24)
Length = 921
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 318 LVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERN--KELETDLRQHQNVIEDQ 491
LV+K EE+ Q+ L C++ AA+ + + K LET +R Q+VIE
Sbjct: 158 LVQKLVPSQEEVCQNSLNLILCVITQEHKAADAAQIFHDTAGWKHLETSMRCLQSVIEGC 217
Query: 492 AQE 500
+E
Sbjct: 218 GEE 220
>SB_44786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/54 (27%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Frame = +3
Query: 369 TSRRCMLDDLQLAAELGKTLLE---RNKELETDLRQHQNVIEDQAQEIEYLQSK 521
T++RC + + +A EL + ++ R E+E R + ++E++ +EIE L+++
Sbjct: 494 TNQRCAVAVVLIAGELKQAIVSMMLRKDEIEEQNRTLRQLMEEKRREIEGLRAE 547
>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
Length = 1011
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +3
Query: 324 KKKFGGNEELEQDD--LTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQ 497
KK E L++ D + + ++ L L A + + + RN++L+ L++ ++ ++Q +
Sbjct: 507 KKDEYATETLKRKDDIIQELKQKVETLNLKANMNE-VERRNEKLDEQLQKQKDRNDEQDE 565
Query: 498 EIEYLQSKRLLCE 536
+I L +K L CE
Sbjct: 566 KINLLFAKSLECE 578
>SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)
Length = 515
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Frame = +2
Query: 488 SSTRNRILTKQTVAL-REVNDSRLRIYEQLELSI---QDLERANHRLAVDHAADKKHIKS 655
S T N +L L R + D+R ++++ + + Q+LE+ + + A K+ ++
Sbjct: 46 SVTTNSLLRATICELERALKDTRRLLFQRDKDNATLRQELEKTRKDINKEQAQRKRVVEG 105
Query: 656 LCSNIDT---VEAKCEELQKTVDELNVQLE 736
+ T V+ +CE+ + ++LNV++E
Sbjct: 106 CEEKLKTYNEVQRRCEQFKTENEQLNVEME 135
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,711,578
Number of Sequences: 59808
Number of extensions: 464631
Number of successful extensions: 1740
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1736
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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