Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20944
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 35 0.071
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 35 0.071
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 35 0.071
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 35 0.071
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.16
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.16
U88180-12|AAO21402.1| 476|Caenorhabditis elegans Hypothetical p... 33 0.16
U88180-11|AAO21401.1| 566|Caenorhabditis elegans Hypothetical p... 33 0.16
U88180-10|AAO21403.1| 532|Caenorhabditis elegans Hypothetical p... 33 0.16
U88180-9|AAM22071.1| 517|Caenorhabditis elegans Hypothetical pr... 33 0.16
U88180-8|AAB42296.1| 607|Caenorhabditis elegans Hypothetical pr... 33 0.16
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 33 0.16
U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical pr... 30 2.0
U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70213-8|CAA94170.4| 253|Caenorhabditis elegans Hypothetical pr... 29 2.7
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.7
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.7
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.7
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.7
U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical... 29 2.7
Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 3.5
AL031634-1|CAA21034.1| 256|Caenorhabditis elegans Hypothetical ... 29 3.5
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41528-4|AAM51513.1| 122|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 29 4.7
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 29 4.7
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z93396-2|CAB07711.1| 343|Caenorhabditis elegans Hypothetical pr... 28 8.2
U55369-6|ABO16439.1| 476|Caenorhabditis elegans Hypothetical pr... 28 8.2
U41542-14|ABO16444.1| 331|Caenorhabditis elegans Hsn abnormal m... 28 8.2
U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal m... 28 8.2
U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal m... 28 8.2
U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical pr... 28 8.2
U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical pr... 28 8.2
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 28 8.2
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 28 8.2
M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical pr... 28 8.2
M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 351 LEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485
LE ++ + RC ++ Q+ AE+ K + E+ +E E + HQ I+
Sbjct: 1567 LESEESKALRCQIEVSQIRAEIEKRIAEKEEEFENHRKVHQQTID 1611
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 351 LEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485
LE ++ + RC ++ Q+ AE+ K + E+ +E E + HQ I+
Sbjct: 1567 LESEESKALRCQIEVSQIRAEIEKRIAEKEEEFENHRKVHQQTID 1611
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 351 LEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485
LE ++ + RC ++ Q+ AE+ K + E+ +E E + HQ I+
Sbjct: 1567 LESEESKALRCQIEVSQIRAEIEKRIAEKEEEFENHRKVHQQTID 1611
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 351 LEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIE 485
LE ++ + RC ++ Q+ AE+ K + E+ +E E + HQ I+
Sbjct: 67 LESEESKALRCQIEVSQIRAEIEKRIAEKEEEFENHRKVHQQTID 111
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELN 724
+ LRI ++LE I DLE A +A +K IK + ++ + EE Q+ DE+
Sbjct: 1622 EEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIR 1681
Query: 725 VQLEIYRRR 751
Q +R
Sbjct: 1682 EQFLASEKR 1690
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +2
Query: 545 DSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELN 724
+ LRI ++LE I DLE A +A +K IK + ++ + EE Q+ DE+
Sbjct: 1622 EEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIR 1681
Query: 725 VQLEIYRRR 751
Q +R
Sbjct: 1682 EQFLASEKR 1690
>U88180-12|AAO21402.1| 476|Caenorhabditis elegans Hypothetical
protein T27A3.1d protein.
Length = 476
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/21 (61%), Positives = 21/21 (100%)
Frame = +3
Query: 393 DLQLAAELGKTLLERNKELET 455
DL+LAA++G++LLE+NK+L+T
Sbjct: 36 DLELAAKIGQSLLEQNKDLQT 56
>U88180-11|AAO21401.1| 566|Caenorhabditis elegans Hypothetical
protein T27A3.1c protein.
Length = 566
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/21 (61%), Positives = 21/21 (100%)
Frame = +3
Query: 393 DLQLAAELGKTLLERNKELET 455
DL+LAA++G++LLE+NK+L+T
Sbjct: 36 DLELAAKIGQSLLEQNKDLQT 56
>U88180-10|AAO21403.1| 532|Caenorhabditis elegans Hypothetical
protein T27A3.1e protein.
Length = 532
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/21 (61%), Positives = 21/21 (100%)
Frame = +3
Query: 393 DLQLAAELGKTLLERNKELET 455
DL+LAA++G++LLE+NK+L+T
Sbjct: 77 DLELAAKIGQSLLEQNKDLQT 97
>U88180-9|AAM22071.1| 517|Caenorhabditis elegans Hypothetical
protein T27A3.1b protein.
Length = 517
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/21 (61%), Positives = 21/21 (100%)
Frame = +3
Query: 393 DLQLAAELGKTLLERNKELET 455
DL+LAA++G++LLE+NK+L+T
Sbjct: 77 DLELAAKIGQSLLEQNKDLQT 97
>U88180-8|AAB42296.1| 607|Caenorhabditis elegans Hypothetical
protein T27A3.1a protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/21 (61%), Positives = 21/21 (100%)
Frame = +3
Query: 393 DLQLAAELGKTLLERNKELET 455
DL+LAA++G++LLE+NK+L+T
Sbjct: 77 DLELAAKIGQSLLEQNKDLQT 97
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +2
Query: 485 RSSTRNRILTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAAD--KKHIKSL 658
R + + Q +R++ D + + E LE +Q ++ N R AV+ A K+ SL
Sbjct: 248 RMVVASETIADQDSNIRQIRDLQTTVGE-LETQVQQVQ--NERAAVEQTAQNYKQRCTSL 304
Query: 659 CSNIDTVEAKCEELQKTVDELNVQLEIYRR 748
+DT E + K L +QLE R+
Sbjct: 305 QQELDTSEVVQRDFVKLSQSLQIQLEKIRQ 334
>U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical
protein F57B9.7b protein.
Length = 373
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 536 EVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVD 715
+VN + +++L +QDLER N + + +K SN D E + +EL+ +
Sbjct: 275 DVNKDAAKQLAEMKLKMQDLERENTNQQGNVIRMEGQMKRYKSNADVAEKELDELKTQMR 334
Query: 716 ELNVQL 733
+ +L
Sbjct: 335 QTKKEL 340
>U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical
protein F57B9.7a protein.
Length = 353
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +2
Query: 536 EVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVD 715
+VN + +++L +QDLER N + + +K SN D E + +EL+ +
Sbjct: 255 DVNKDAAKQLAEMKLKMQDLERENTNQQGNVIRMEGQMKRYKSNADVAEKELDELKTQMR 314
Query: 716 ELNVQL 733
+ +L
Sbjct: 315 QTKKEL 320
>Z70213-8|CAA94170.4| 253|Caenorhabditis elegans Hypothetical
protein ZK930.3a protein.
Length = 253
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 578 LSIQDLER-ANHRLAVD-HAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQLE 736
LS+ +L + AN + VD + A + + S ++ E +E KT+DELN + E
Sbjct: 16 LSMSELHKVANAKTKVDDYFAKRNELLEELSELENTEKFIKETAKTIDELNKEKE 70
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 563 YEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQL 733
YEQL++ ++++ R + A + + L N D + + ++ TVD LN ++
Sbjct: 706 YEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEI 762
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 563 YEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQL 733
YEQL++ ++++ R + A + + L N D + + ++ TVD LN ++
Sbjct: 706 YEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEI 762
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 563 YEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQL 733
YEQL++ ++++ R + A + + L N D + + ++ TVD LN ++
Sbjct: 466 YEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEI 522
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 563 YEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDELNVQL 733
YEQL++ ++++ R + A + + L N D + + ++ TVD LN ++
Sbjct: 706 YEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEI 762
>U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical
protein D2021.1 protein.
Length = 1168
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 432 ERNKELETDLRQHQNVIEDQAQEIEYLQSK 521
E N ELE +++N+I + Q I +LQSK
Sbjct: 216 ENNDELEIAESEYENLITELTQHISFLQSK 245
>AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12a protein.
Length = 1187
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 387 LDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIE 506
+D+ L E K LL+ N ++ET + Q V+E + E+E
Sbjct: 133 VDERVLILEQTKELLDENAQIETTINGLQIVVEKKVDELE 172
>Z81586-5|CAB04696.1| 484|Caenorhabditis elegans Hypothetical
protein T05F1.7 protein.
Length = 484
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 533 REVNDSRLRIYEQLELSIQDLERANHRL---AVDHAADKKHIKSLCSNIDTVEAKCEELQ 703
RE + + + + I +L R +L + + D+K K + + K ++++
Sbjct: 339 READRAAQNLRNAENIRISELNRQERKLQPPTLVESKDEKREKEYLEKKEKLAEKIKQIE 398
Query: 704 KTVDELNVQLEIYRRRA 754
K+ DE +LE R+R+
Sbjct: 399 KSTDEQKTELERIRKRS 415
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +2
Query: 515 KQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCE 694
K+ + + +V R EQL + DLE N +L H +L + + +
Sbjct: 923 KKVMKMNDVLREYERKIEQLNMEKTDLENENQKLRETQNRQDSHYSNLEKEVMEKSSLID 982
Query: 695 ELQKTVDELN 724
ELQ + +L+
Sbjct: 983 ELQNQIQKLS 992
>AL031634-1|CAA21034.1| 256|Caenorhabditis elegans Hypothetical
protein Y32B12C.1 protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 638 KKHIKSLCSNIDTVEAKCEELQKTVDELNVQLE 736
KK+I+ ++ + EE+Q+T DELNV+ E
Sbjct: 83 KKNIEDTRGRLEDDKETLEEIQRTHDELNVKFE 115
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 542 NDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
N+ I ++ EL I DL + ++ A DK+H+K + + ++ K + VD
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKI---EALDKEHLKVIAKSQRELQEKTRLKSEVVDLK 721
Query: 722 NVQLEIYRR 748
++E+ ++
Sbjct: 722 KAKVELIKK 730
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 542 NDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
N+ I ++ EL I DL + ++ A DK+H+K + + ++ K + VD
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKI---EALDKEHLKVIAKSQRELQEKTRLKSEVVDLK 721
Query: 722 NVQLEIYRR 748
++E+ ++
Sbjct: 722 KAKVELIKK 730
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 542 NDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
N+ I ++ EL I DL + ++ A DK+H+K + + ++ K + VD
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKI---EALDKEHLKVIAKSQRELQEKTRLKSEVVDLK 721
Query: 722 NVQLEIYRR 748
++E+ ++
Sbjct: 722 KAKVELIKK 730
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 542 NDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
N+ I ++ EL I DL + ++ A DK+H+K + + ++ K + VD
Sbjct: 665 NEQMKAIKQEYELKITDLRKELKKI---EALDKEHLKVIAKSQRELQEKTRLKSEVVDLK 721
Query: 722 NVQLEIYRR 748
++E+ ++
Sbjct: 722 KAKVELIKK 730
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 300 MSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNV 479
++E +L+KK + E+++ C ELG+ LLERN + Q QN+
Sbjct: 1168 VAEAEELLKKHYELGEQIKDKKYEVEYCQ--------ELGRRLLERNPRMSKVEEQLQNL 1219
Query: 480 IEDQA 494
+ + A
Sbjct: 1220 VSEMA 1224
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 300 MSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNV 479
++E +L+KK + E+++ C ELG+ LLERN + Q QN+
Sbjct: 1168 VAEAEELLKKHYELGEQIKDKKYEVEYCQ--------ELGRRLLERNPRMSKVEEQLQNL 1219
Query: 480 IEDQA 494
+ + A
Sbjct: 1220 VSEMA 1224
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 LTKQTVALREVNDSR-LRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEA 685
L +Q + E D + L EQL+ ++ + N L A H +D
Sbjct: 1645 LRQQLIEASESADLKSLEELEQLKEELRIVSEQNGLLKDSEARLLDHADEFAVQMDKYRE 1704
Query: 686 KCEELQKTVDELNVQLE 736
KCE L + EL QL+
Sbjct: 1705 KCEVLTAKIAELEAQLQ 1721
>U41528-4|AAM51513.1| 122|Caenorhabditis elegans Hypothetical
protein C15C7.1 protein.
Length = 122
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 390 DDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSK 521
D+L+L +TL + + +L Q +++D QE+EY +++
Sbjct: 39 DELELVGNSVRTLRGMSSMIGDELDQQSTMLDDLGQEMEYSETR 82
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 300 MSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNV 479
++E +L+KK + E+++ C ELG+ LLERN + Q QN+
Sbjct: 1168 VAEAEELLKKHYELGEQIKDKKYEVEYCQ--------ELGRRLLERNPRMSKVEEQLQNL 1219
Query: 480 IEDQA 494
+ + A
Sbjct: 1220 VSEMA 1224
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 542 NDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
N+ I ++ EL I DL + ++ A DK+H+K + + ++ K + VD
Sbjct: 669 NEQMKAIKQEYELKITDLRKELKKI---EALDKEHLKVIAKSQRELQEKTRLKSEVVDLK 725
Query: 722 NVQLEIYRR 748
++E+ ++
Sbjct: 726 KAKVELIKK 734
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 293 VNNVRSNGSGEEEIRWKRRAGARRSHLTSLYARRFATGGRTRENPTRTQQGTRDRPSPAS 472
V + + +E+ R ++ A R + L +R R+++NP QQG + P S
Sbjct: 2686 VRREKEEAARQEKERQEQEARMREAREAELSRQRMEQQRRSQQNPYMNQQGQYSQQPPPS 2745
Query: 473 KCY*RSSTRN 502
Y +SS N
Sbjct: 2746 --YQQSSYPN 2753
>Z46828-5|CAA86861.3| 596|Caenorhabditis elegans Hypothetical
protein R03D7.8 protein.
Length = 596
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 3 VVRAWSTCTKRMCGH*PYEAAI 68
+ RA +C KRMC H P+ A I
Sbjct: 442 ITRAVQSCIKRMCTHMPFAAII 463
>Z93396-2|CAB07711.1| 343|Caenorhabditis elegans Hypothetical
protein ZC15.3 protein.
Length = 343
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/65 (20%), Positives = 29/65 (44%)
Frame = +2
Query: 536 EVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVD 715
++ D R EQL++++ +L DHA +K++ + + + + + + V
Sbjct: 96 QLADQLGRFNEQLDMAVNSFSDEIVKLKADHALAEKNVDTYAQKVSGMFQRADMMSANVQ 155
Query: 716 ELNVQ 730
E Q
Sbjct: 156 EQRTQ 160
>U55369-6|ABO16439.1| 476|Caenorhabditis elegans Hypothetical
protein C18C4.1b protein.
Length = 476
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = +3
Query: 213 QLVSEPLRIMFSLCTRIHRCIA*CHKQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLD 392
QLV+E L + H I+ K +S + + +++ + ELE+D S R + D
Sbjct: 19 QLVNETLTTVIEKVQTNHEKISTKAKPRPLSAINEEIREYDQLSRELEKDYRRSMRIVDD 78
Query: 393 DLQLAAELGKTLLERNKE 446
D +LA L + NK+
Sbjct: 79 DFELARTHWIQLQKSNKQ 96
>U41542-14|ABO16444.1| 331|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform c protein.
Length = 331
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 677 VEAKCEELQKTVDELNVQLEIYRR 748
VE KC +KT+ EL VQ++ R+
Sbjct: 259 VEDKCRAYEKTIRELQVQVDFLRK 282
>U41542-13|ABO16442.1| 390|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform a protein.
Length = 390
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 677 VEAKCEELQKTVDELNVQLEIYRR 748
VE KC +KT+ EL VQ++ R+
Sbjct: 318 VEDKCRAYEKTIRELQVQVDFLRK 341
>U41542-12|ABO16443.1| 392|Caenorhabditis elegans Hsn abnormal
migration protein2, isoform b protein.
Length = 392
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 677 VEAKCEELQKTVDELNVQLEIYRR 748
VE KC +KT+ EL VQ++ R+
Sbjct: 320 VEDKCRAYEKTIRELQVQVDFLRK 343
>U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical
protein C27H5.2d protein.
Length = 464
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 569 QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
+L++ + ++E NH L IK + I + + + L K +D+L
Sbjct: 266 ELQMKLMNVEEENHGLKAQLETSHNRIKEMSDTISMLTSSKDILSKELDQL 316
>U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical
protein C27H5.2b protein.
Length = 459
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 569 QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
+L++ + ++E NH L IK + I + + + L K +D+L
Sbjct: 266 ELQMKLMNVEEENHGLKAQLETSHNRIKEMSDTISMLTSSKDILSKELDQL 316
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 569 QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
+L++ + ++E NH L IK + I + + + L K +D+L
Sbjct: 266 ELQMKLMNVEEENHGLKAQLETSHNRIKEMSDTISMLTSSKDILSKELDQL 316
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +2
Query: 569 QLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTVDEL 721
+L++ + ++E NH L IK + I + + + L K +D+L
Sbjct: 266 ELQMKLMNVEEENHGLKAQLETSHNRIKEMSDTISMLTSSKDILSKELDQL 316
>M98552-2|AAL11480.1| 921|Caenorhabditis elegans Hypothetical
protein ZK370.3b protein.
Length = 921
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +3
Query: 348 ELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSK 521
+L + D+ + ++ L L ++ K ++ ELE ++R+ + I QEIE +Q +
Sbjct: 654 KLLRQDIQTLNSLMISLPLQTDIDKDVV--GNELEQEMRRMDDAIRRAVQEIEAIQRR 709
>M98552-1|AAA28205.2| 927|Caenorhabditis elegans Hypothetical
protein ZK370.3a protein.
Length = 927
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +3
Query: 348 ELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETDLRQHQNVIEDQAQEIEYLQSK 521
+L + D+ + ++ L L ++ K ++ ELE ++R+ + I QEIE +Q +
Sbjct: 654 KLLRQDIQTLNSLMISLPLQTDIDKDVV--GNELEQEMRRMDDAIRRAVQEIEAIQRR 709
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,534,885
Number of Sequences: 27780
Number of extensions: 337523
Number of successful extensions: 1246
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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