Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20942
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   3.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   3.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   3.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.1  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 413 SLLRNIYF*ATECFQFCNEQKQNQIQIYTYWLMKF 309
           S   ++ F   + F    + K N  +IY YW   F
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGF 328


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 413 SLLRNIYF*ATECFQFCNEQKQNQIQIYTYWLMKF 309
           S   ++ F   + F    + K N  +IY YW   F
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGF 328


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -3

Query: 413 SLLRNIYF*ATECFQFCNEQKQNQIQIYTYWLMKF 309
           S   ++ F   + F    + K N  +IY YW   F
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGF 328


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 496 MFYLTRCYSFVLYYLH*LISM 558
           +FYL  CY  +  +++ LIS+
Sbjct: 16  LFYLFYCYKTIKQHIYSLISL 36


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 496 MFYLTRCYSFVLYYLH*LISM 558
           +FYL  CY  +  +++ LIS+
Sbjct: 16  LFYLFYCYKTIKQHIYSLISL 36


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 547 VSVNNKVQTSNIALGKTYCL 488
           V  NNK+ T + ALG   C+
Sbjct: 504 VVYNNKIPTGDGALGGEVCM 523


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,827
Number of Sequences: 336
Number of extensions: 3618
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)