Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20942
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061409-1|AAL28957.1|  198|Drosophila melanogaster LD33828p pro...    53   4e-07
AE014134-842|AAF52202.1|  198|Drosophila melanogaster CG3887-PA ...    53   4e-07
AY118739-1|AAM50599.1|  351|Drosophila melanogaster GH04973p pro...    29   7.8  
AE014134-3109|AAF53808.1|  351|Drosophila melanogaster CG10194-P...    29   7.8  

>AY061409-1|AAL28957.1|  198|Drosophila melanogaster LD33828p
           protein.
          Length = 198

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 507 NAMLLVCTLLFTLTHINADSD-EGSISKIGSSVGHTMNIYYCYSCGYKKVFEDYAGI 674
           N  LLV  L      + A+ + E  ++K G ++  TM   YCYSCGY+K FEDY G+
Sbjct: 8   NVALLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGL 64


>AE014134-842|AAF52202.1|  198|Drosophila melanogaster CG3887-PA
           protein.
          Length = 198

 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 507 NAMLLVCTLLFTLTHINADSD-EGSISKIGSSVGHTMNIYYCYSCGYKKVFEDYAGI 674
           N  LLV  L      + A+ + E  ++K G ++  TM   YCYSCGY+K FEDY G+
Sbjct: 8   NVALLVLCLCAGYALVFAEGEKEIPVTKFGQNIAPTMTFLYCYSCGYRKAFEDYVGL 64


>AY118739-1|AAM50599.1|  351|Drosophila melanogaster GH04973p
           protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 96  WSTRSTNRMGFGLEYFYVVLNQKVKKEP*MTVSQNKLQNAKWGDTADYI 242
           W T ST +  F   +F   L Q    EP + +  N+++++ W    DY+
Sbjct: 181 WRTPSTFKKRFETAFFMTALEQ----EPRVHIEPNEVKDSAWRSPLDYL 225


>AE014134-3109|AAF53808.1|  351|Drosophila melanogaster CG10194-PA
           protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 96  WSTRSTNRMGFGLEYFYVVLNQKVKKEP*MTVSQNKLQNAKWGDTADYI 242
           W T ST +  F   +F   L Q    EP + +  N+++++ W    DY+
Sbjct: 181 WRTPSTFKKRFETAFFMTALEQ----EPRVHIEPNEVKDSAWRSPLDYL 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,538,313
Number of Sequences: 53049
Number of extensions: 531310
Number of successful extensions: 1129
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)