Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20942
         (682 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical pr...    33   0.19 
Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical pr...    33   0.19 
Z81570-1|CAB04606.1|  749|Caenorhabditis elegans Hypothetical pr...    33   0.25 
AY887910-1|AAX34422.1|  749|Caenorhabditis elegans anion transpo...    33   0.25 
Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U80029-15|AAB37594.2|  642|Caenorhabditis elegans Hypothetical p...    29   4.1  
Z69794-1|CAA93679.2|  663|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical pr...    28   7.1  

>Z78417-2|CAB01692.1|  258|Caenorhabditis elegans Hypothetical
           protein C35C5.3b protein.
          Length = 258

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 609 TMNIYYCYSCGYKKVFEDY 665
           T+ I+YC SCGYK+ F+ +
Sbjct: 97  TLRIFYCVSCGYKQAFDQF 115


>Z78417-1|CAB01684.1|  255|Caenorhabditis elegans Hypothetical
           protein C35C5.3a protein.
          Length = 255

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 609 TMNIYYCYSCGYKKVFEDY 665
           T+ I+YC SCGYK+ F+ +
Sbjct: 94  TLRIFYCVSCGYKQAFDQF 112


>Z81570-1|CAB04606.1|  749|Caenorhabditis elegans Hypothetical
           protein K12G11.1 protein.
          Length = 749

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +3

Query: 246 FDNKKCHLKN*IKEALKQWFLKFHKPISIDLYLVLFLF--ITKLKTFGRLK 392
           FD  K HL+N +K+  K++  +F++P +    L LF+F  I  LK F   K
Sbjct: 55  FDYNKPHLENELKKQAKKFVRRFYEPFTSFFALKLFIFDLIPILKWFPEYK 105


>AY887910-1|AAX34422.1|  749|Caenorhabditis elegans anion
           transporter SULP-4 protein.
          Length = 749

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +3

Query: 246 FDNKKCHLKN*IKEALKQWFLKFHKPISIDLYLVLFLF--ITKLKTFGRLK 392
           FD  K HL+N +K+  K++  +F++P +    L LF+F  I  LK F   K
Sbjct: 55  FDYNKPHLENELKKQAKKFVRRFYEPFTSFFALKLFIFDLIPILKWFPEYK 105


>Z72508-4|CAA96637.2|  216|Caenorhabditis elegans Hypothetical
           protein F28H7.4 protein.
          Length = 216

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 546 THINADSDEGSISKIGSSVG-HTMNIYYCYSCGYKKVFEDY 665
           T +N +S    +   G S     + I YC SCGYK+ F  +
Sbjct: 49  TVVNENSHSQDVVDSGFSKDLPKLTILYCVSCGYKQAFNQF 89


>U80029-15|AAB37594.2|  642|Caenorhabditis elegans Hypothetical
           protein T20D4.3 protein.
          Length = 642

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +1

Query: 451 YLLNSVRKDISMSNNMFYLTRCYSFVLYYLH*LISMLIVMKAALVKLVQVSGIQ 612
           Y+ +++ + +   NN  YL   Y   + ++H + ++ I  K+    LVQV GI+
Sbjct: 125 YVASNIERVVDKENNETYLHPEYPLEIAHIHWVFNVEIPGKSVEKILVQVPGIE 178


>Z69794-1|CAA93679.2|  663|Caenorhabditis elegans Hypothetical
           protein R03G8.1 protein.
          Length = 663

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 201 KLQNAKWGDTADYILFDNKKCHLKN*IKEAL 293
           KL+N+KWG T  + L    +CH +   KE L
Sbjct: 90  KLENSKWGVTFAHNLTCRARCHTRKRDKENL 120


>Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical
           protein T08G3.8 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +2

Query: 323 NKYRFVFGFVSVHYKIENIRSP-KNKYSVVKRNNHCESNDLHPFIY*IRLEKISVCQTIC 499
           N+Y  +F  V+  Y +  +    K  Y  + R N C S DLHP ++     +  + Q  C
Sbjct: 12  NRYS-LFAIVTGIYSMPTVYILIKLSYYFLYRKNKCYSTDLHPVLF----RQFMIMQIAC 66

Query: 500 F 502
           F
Sbjct: 67  F 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,005,098
Number of Sequences: 27780
Number of extensions: 308157
Number of successful extensions: 805
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)