Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20941
(729 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 49 1e-07
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 48 2e-07
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 46 9e-07
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 46 2e-06
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 46 2e-06
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 44 6e-06
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 43 8e-06
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 42 2e-05
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 42 3e-05
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 41 5e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 40 1e-04
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 34 0.004
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 29 0.11
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 27 0.79
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 25 2.4
AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related ... 25 2.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 5.5
AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative 5-oxoprol... 24 5.5
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 24 5.5
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 7.3
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 7.3
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 9.7
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 49.2 bits (112), Expect = 1e-07
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = -1
Query: 492 IIAITINNICYVSLYI-PHPTSSVYNE----IESIFSIFPNPILIMGDFNAQHVAWGSSI 328
++A I I ++S Y P T + + E +E S PN +++ GDFNA H AWGS+
Sbjct: 75 LVAADIGGITFISCYASPRMTVAEFEEFLNAVEIEVSAHPN-VVLGGDFNAWHEAWGSAR 133
Query: 327 SNHYGSRLLDMVDKYKWCILNTG 259
+ G LL+ V++ +LN G
Sbjct: 134 TKRKGEELLNTVEQLGLIVLNRG 156
Score = 25.8 bits (54), Expect = 1.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 223 SAPDLSICTPNLASIVSWNILSSSYGSDHFPIVINFPIATSS 98
S D++ +P++ +W +L S + SDH + F + +SS
Sbjct: 170 SVIDVTFASPSIVRYNTWEVLKSYWYSDH--RYVRFSVDSSS 209
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 48.4 bits (110), Expect = 2e-07
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = -1
Query: 492 IIAITINNICYVSLYIP--HPTSSVYNEIESIF--SIFPNPILIMGDFNAQHVAWGSSIS 325
++A I ++S Y P PT IE++ ++ + ++I GDFNA HV WGS +
Sbjct: 78 LVAAEIGGTTFLSCYAPPRQPTDEFERFIEAVQLETLTHSQVVIAGDFNAWHVEWGSERN 137
Query: 324 NHYGSRLLDMVDKYKWCILNTG 259
+ G LL + + +LN G
Sbjct: 138 SEKGEELLSAIQQLDLVVLNQG 159
Score = 27.5 bits (58), Expect = 0.45
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = -3
Query: 223 SAPDLSICTPNLASIVSWNILSSSYGSDHFPIVINFPIATSSRTKCRSPRMK 68
S D++ TP +A +WN+ SDH I + SPRM+
Sbjct: 173 SIVDVAFATPTIAQPGTWNVCGDYSYSDHRYITYTVGTIVPVVNEPSSPRMR 224
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 46.4 bits (105), Expect = 9e-07
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = -1
Query: 492 IIAITINNICYVSLYI-PHPTSSVYNEIESIFSIFP--NP-ILIMGDFNAQHVAWGSSIS 325
I A IN++ ++ Y+ P S + E+ + +P ++ GD NA H AWGS +
Sbjct: 75 IAAARINDVLFICCYVSPSAGVSEFEEVMQRIDVLARGHPRVVFAGDLNAWHTAWGSCRT 134
Query: 324 NHYGSRLLDMVDKYKWCILNTG 259
N G ++ +VD +LNTG
Sbjct: 135 NAKGEAVVQLVDSLGLEVLNTG 156
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 45.6 bits (103), Expect = 2e-06
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = -1
Query: 492 IIAITINNICYVSLYIPHPTSSVYNE--IESI-FSIFPNP-ILIMGDFNAQHVAWGSSIS 325
++A I + ++S Y P + E +E+I F +P +++ GDFNA+H WGS +
Sbjct: 88 LVAAQIGGVVFISCYAPPSLNLAEFERFLEAIELEGFSHPQVVVAGDFNARHEEWGSPRT 147
Query: 324 NHYGSRLLDMVDKYKWCILNTGKE 253
G L MV++ ++N G+E
Sbjct: 148 CDRGEELHGMVEQLGLIVINQGRE 171
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 45.6 bits (103), Expect = 2e-06
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = -1
Query: 492 IIAITINNICYVSLYIPHPTSSVYNE--IESIF--SIFPNPILIMGDFNAQHVAWGSSIS 325
++A + I ++S+Y P S E +E++ + + ++I GDFNA H WGS +
Sbjct: 77 LVAAKVAGIDFISVYAPPSLSPQEYERLLEAVELEASSHSHVVIAGDFNAWHTEWGSRRN 136
Query: 324 NHYGSRLLDMVDKYKWCILNTG 259
N G LL MV+ ILN G
Sbjct: 137 NLRGEELLQMVEVLGLSILNNG 158
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 43.6 bits (98), Expect = 6e-06
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = -1
Query: 492 IIAITINNICYVSLYIPHPTSSVYNEIESIFSIFP------NPILIMGDFNAQHVAWGSS 331
++A + I ++S+Y P P+ S + E E + + +++ GDFNA H WGS
Sbjct: 140 LVAAQVAGITFISVYAP-PSLSAH-EFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSG 197
Query: 330 ISNHYGSRLLDMVDKYKWCILNTGKE 253
+ G LL V+ ILN G++
Sbjct: 198 RNGQRGIELLQTVETLGLSILNQGRK 223
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 43.2 bits (97), Expect = 8e-06
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -1
Query: 492 IIAITINNICYVSLYI-PHPTSSVYNEIESIFSIFPNP---ILIMGDFNAQHVAWGSSIS 325
I+A I I ++S Y P Y + + + ++I GDFNA H WGS+ +
Sbjct: 97 IVAAQIGGIVFISCYARPRRPEEDYEGFLAAVQLEASTHSQVVIDGDFNAWHTEWGSARN 156
Query: 324 NHYGSRLLDMVDKYKWCILNTGKE 253
+ G LL ++ + ++N+G E
Sbjct: 157 SQRGEDLLQLIQSVQLQVINSGNE 180
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 41.9 bits (94), Expect = 2e-05
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = -1
Query: 492 IIAITINNICYVSLYI-PHPTSSVYNEIESIFSIF--PNP-ILIMGDFNAQHVAWGSSIS 325
I+ +N I V Y+ P+ + EI I +P +L+ GDFNA H AWGS +
Sbjct: 75 IVVADVNGITIVYYYVKPNVGVRQFEEIMERIDILIRGHPRVLLAGDFNAWHTAWGSERT 134
Query: 324 NHYGSRLLDMVDKYKWCILNTG 259
G LL +V+ +LN G
Sbjct: 135 KPKGIALLQLVNGLGLEVLNIG 156
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 41.5 bits (93), Expect = 3e-05
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = -1
Query: 492 IIAITINNICYVSLYIPHPTS-SVYNEIESIFS--IFP-NPILIMGDFNAQHVAWGSSIS 325
+IA+ IN I + S Y P + E+ S ++ NPI+I GDFNA WGS +
Sbjct: 75 VIAV-INKITFCSCYAPPRWDLEKFEEMLKRISDEVYDVNPIIISGDFNAWATEWGSKST 133
Query: 324 NHYGSRLLDMVDKYKWCILNTG 259
N G+ +L+ + ++N G
Sbjct: 134 NARGNAVLEHFSRLNLVLVNVG 155
Score = 29.1 bits (62), Expect = 0.15
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 214 DLSICTPNLASIVSWNILSSSYGSDH 137
DL+ C+P LAS ++W + ++ SDH
Sbjct: 170 DLTFCSPALASSMNWRVSNAYTLSDH 195
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 40.7 bits (91), Expect = 5e-05
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = -1
Query: 492 IIAITINNICYVSLYIPHPTSSV-YNE-IESI-FSIFPNP-ILIMGDFNAQHVAWGSSIS 325
+IA + I ++S Y P S + E +E+I +P +++ GDFNA H WGS S
Sbjct: 134 LIAAKVGGITFLSCYAPPSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEEWGSRRS 193
Query: 324 NHYGSRLLDMVDKYKWCILNTG 259
N G LL+ + ++N G
Sbjct: 194 NERGEVLLEASQQLGLLLMNRG 215
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 39.5 bits (88), Expect = 1e-04
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -1
Query: 465 CYVSLYIPHPT-SSVYNEIESIFSIFPNPILIMGDFNAQHVAWGSSISNHYGSRLLDMVD 289
CYVS P S+ +I+ I +L+ GDFNA H+ WGSS + G LL + D
Sbjct: 89 CYVSPQTGVPEFRSIMEKIDLIVRGCSR-VLLAGDFNAMHLDWGSSRTCPKGLELLQLAD 147
Query: 288 KYKWCILN 265
+LN
Sbjct: 148 NLGLVLLN 155
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 34.3 bits (75), Expect = 0.004
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 384 PILIMGDFNAQHVAWGSSISNHYGSRLLDMVDKYKWCILNTG 259
P++I GDFNA V WGS +N G +L+ + + N G
Sbjct: 112 PLVIAGDFNAWAVEWGSKRTNSRGDAVLESFARLGVTLGNAG 153
Score = 27.1 bits (57), Expect = 0.59
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = -3
Query: 235 HEEISAPDLSICTPNLASIVSWNILSSSYGSDH----FPIVINFPIATSSRTKCRSPRMK 68
++ S D++ C+ L+ ++W + + SDH + I+ + +SS R
Sbjct: 161 NKRTSIVDITFCSTTLSERLNWRVSDALTLSDHNVVRYAIIQGHRLTSSSAHGSRVGGRG 220
Query: 67 FKLENANWFSFKE 29
+K E+ N FKE
Sbjct: 221 WKTESFNEDFFKE 233
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 29.5 bits (63), Expect = 0.11
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Frame = -1
Query: 492 IIAITINNICYVSLYIPHPTSSVYNEIESIFSIF-----PNPILIMGDFNAQHVAWGSSI 328
++A+ + I VS Y P P+ +V E + +I + ++ GDFNA +W +++
Sbjct: 75 MLAVEVGGILIVSAYAP-PSWTVQEFEELLDNIVLTVSGSSKFVVAGDFNAWSSSWANTL 133
Query: 327 SNH------YGSRLLDMVDKYKWCILNTGKELVAHNPMKKSVPLIFQSVLLI 190
G LL + ++N G++ K ++ L F S L+
Sbjct: 134 GARGESQRLRGDTLLAAFAGLEMVLMNNGQDTFVTPERKSAIDLTFVSQSLM 185
Score = 27.9 bits (59), Expect = 0.34
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 232 EEISAPDLSICTPNLASIVSWNILSSSYGSDHFPIVI 122
E SA DL+ + +L W +L SDH I+I
Sbjct: 170 ERKSAIDLTFVSQSLMETTGWEVLPDYMNSDHIGILI 206
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 26.6 bits (56), Expect = 0.79
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 223 SAPDLSICTPNLASIVSWNILSSSYGSDHFPIVIN 119
S DL+ + +A W +LSS SDH I I+
Sbjct: 172 SVVDLTFASRTVARSFKWEVLSSYMNSDHRAIRID 206
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 25.0 bits (52), Expect = 2.4
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 247 RTQPHEE-ISAPDLSICTPNLASIVSWNILSSSYGSDHFPIVINFPIA 107
R +P+ + P L+ P LAS+ N S +YG D FP A
Sbjct: 84 RIRPYPSAVKMPTLT-WDPELASLADANARSCNYGHDRCRATKKFPYA 130
>AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related 1
protein protein.
Length = 178
Score = 25.0 bits (52), Expect = 2.4
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -3
Query: 247 RTQPHEE-ISAPDLSICTPNLASIVSWNILSSSYGSDHFPIVINFPIA 107
R +P+ + P L+ P LAS+ N S +YG D FP A
Sbjct: 84 RIRPYPSAVKMPTLT-WDPELASLADANARSCNYGHDRCRATKKFPYA 130
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 580 DLSSRIQEYLGILKLKPGRSQVSCKEIKKRLI 675
DL ++ +Y K+K R + CKE+ RL+
Sbjct: 658 DLQEQLSKYQQT-KMKVKRQEQKCKELTARLV 688
>AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 756
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 180 IEARLGVQIERSGALISSWGCVRRVPYQYLKY 275
+ AR Q+E G ++ G + PY +L+Y
Sbjct: 525 LSARCVEQLEAQGFALADEGSISLEPYLHLRY 556
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 180 IEARLGVQIERSGALISSWGCVRRVPYQYLKY 275
+ AR Q+E G ++ G + PY +L+Y
Sbjct: 569 LSARCVEQLEAQGFALADEGSISLEPYLHLRY 600
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.4 bits (48), Expect = 7.3
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 11/64 (17%)
Frame = -1
Query: 489 IAITINNI-CYVSL-YIPHPTSSVYNEIESI------FSIFPNP---ILIMGDFNAQHVA 343
+ + NN YV + YIP SS + + S+ F++ P + ++GDFN ++
Sbjct: 174 VRVACNNAHLYVMVVYIPPQLSSEISTLRSLHDCISSFTLRLKPSDLLFVIGDFNQPSIS 233
Query: 342 WGSS 331
W ++
Sbjct: 234 WSTA 237
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 7.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 223 SAPDLSICTPNLASIVSWNILSSSYGSDH 137
S D+S C+P+L +W + + SDH
Sbjct: 178 SIVDVSFCSPSLVGDNNWRVCDET-PSDH 205
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.0 bits (47), Expect = 9.7
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Frame = -1
Query: 462 YVSL-YIPHPTSSVYNEIESIFSIF--------PNP-ILIMGDFNAQHVAWGSSISNHYG 313
YV + Y+P SS N ES+ + PN ++++GDFN + W + +
Sbjct: 113 YVGIVYVPPYLSSDRNYFESLSAFIXDAYMHMKPNDHLILLGDFNQPALGWSPAAAVRSD 172
Query: 312 SRL 304
S L
Sbjct: 173 SSL 175
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,570
Number of Sequences: 2352
Number of extensions: 13229
Number of successful extensions: 52
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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