Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20939
(500 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 35 0.18
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 35 0.18
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 35 0.18
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 35 0.18
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein. 35 0.18
BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein. 35 0.18
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 35 0.18
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 35 0.18
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 35 0.18
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 35 0.18
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 35 0.18
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 32 1.3
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 32 1.3
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 32 1.3
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 32 1.3
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 32 1.3
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 32 1.3
BC128038-1|AAI28039.1| 146|Homo sapiens LOC728643 protein protein. 31 3.0
BC112995-1|AAI12996.1| 146|Homo sapiens LOC728643 protein protein. 31 3.0
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRNA
fragment DNA binding protein UPI homologue
(C-terminus). ).
Length = 196
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 138 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 165
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 109 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 136
>BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein.
Length = 167
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 109 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 136
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 209 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 236
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 240 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 267
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 34.7 bits (76), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPY 92
DFGNYN QS + GP + +G S PY
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGPY 289
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 31.9 bits (69), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRS 83
DFGNYNQQ + GP ++ +G +R+
Sbjct: 290 DFGNYNQQPSNYGPMKSGNFGGSRN 314
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 31.9 bits (69), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRS 83
DFGNYNQQ + GP ++ +G +R+
Sbjct: 290 DFGNYNQQPSNYGPMKSGNFGGSRN 314
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 31.9 bits (69), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRS 83
DFGNYNQQ + GP ++ +G +R+
Sbjct: 302 DFGNYNQQPSNYGPMKSGNFGGSRN 326
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 31.9 bits (69), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRS 83
DFGNYNQQ + GP ++ +G +R+
Sbjct: 290 DFGNYNQQPSNYGPMKSGNFGGSRN 314
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 31.9 bits (69), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRS 83
DFGNYNQQ + GP ++ +G +R+
Sbjct: 302 DFGNYNQQPSNYGPMKSGNFGGSRN 326
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 31.9 bits (69), Expect = 1.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTP 89
DFGNYN QS + GP + +G S P
Sbjct: 262 DFGNYNNQSSNFGPMKGGNFGGRSSGP 288
>BC128038-1|AAI28039.1| 146|Homo sapiens LOC728643 protein protein.
Length = 146
Score = 30.7 bits (66), Expect = 3.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTP 89
DFGNYN +S + GP + +G S P
Sbjct: 109 DFGNYNNESSNFGPMKGGNFGGRSSGP 135
>BC112995-1|AAI12996.1| 146|Homo sapiens LOC728643 protein protein.
Length = 146
Score = 30.7 bits (66), Expect = 3.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTP 89
DFGNYN +S + GP + +G S P
Sbjct: 109 DFGNYNNESSNFGPMKGGNFGGRSSGP 135
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,892,810
Number of Sequences: 237096
Number of extensions: 914661
Number of successful extensions: 933
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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