Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20939
(500 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP pro... 45 5e-05
X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous ... 45 5e-05
X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein. 45 5e-05
BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p pro... 45 5e-05
AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-P... 45 5e-05
M25545-4|AAA28621.1| 361|Drosophila melanogaster protein ( D.me... 34 0.12
M25545-3|AAA28624.1| 365|Drosophila melanogaster protein ( D.me... 34 0.12
M25545-2|AAA28623.1| 360|Drosophila melanogaster protein ( D.me... 34 0.12
M25545-1|AAA28622.1| 364|Drosophila melanogaster protein ( D.me... 34 0.12
M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protei... 34 0.12
AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p pro... 34 0.12
AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF... 34 0.12
AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD... 34 0.12
AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC... 34 0.12
AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB... 34 0.12
AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE... 34 0.12
AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA... 34 0.12
L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprot... 32 0.50
L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprot... 32 0.50
BT010254-1|AAQ23572.1| 196|Drosophila melanogaster RE34656p pro... 32 0.50
BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p pro... 32 0.50
AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE... 32 0.50
AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD... 32 0.50
AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI... 32 0.50
AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH... 32 0.50
AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF... 32 0.50
AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB... 32 0.50
AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG... 32 0.50
AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC... 32 0.50
AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA... 32 0.50
>X59691-1|CAA42212.1| 386|Drosophila melanogaster P11 (hnRNP
protein) protein.
Length = 386
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +3
Query: 12 FGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
FGN QQSY GGP RN +GNNR PY+
Sbjct: 317 FGNEYQQSYGGGPQRNSNFGNNRPAPYS 344
>X58183-1|CAA41170.1| 386|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 386
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +3
Query: 12 FGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
FGN QQSY GGP RN +GNNR PY+
Sbjct: 317 FGNEYQQSYGGGPQRNSNFGNNRPAPYS 344
>X54803-1|CAA38574.1| 386|Drosophila melanogaster Hrb87F protein.
Length = 386
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +3
Query: 12 FGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
FGN QQSY GGP RN +GNNR PY+
Sbjct: 317 FGNEYQQSYGGGPQRNSNFGNNRPAPYS 344
>BT012315-1|AAS77440.1| 385|Drosophila melanogaster LD32727p
protein.
Length = 385
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +3
Query: 12 FGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
FGN QQSY GGP RN +GNNR PY+
Sbjct: 316 FGNEYQQSYGGGPQRNSNFGNNRPAPYS 343
>AE014297-1716|AAF54967.1| 385|Drosophila melanogaster CG12749-PA,
isoform A protein.
Length = 385
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +3
Query: 12 FGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
FGN QQSY GGP RN +GNNR PY+
Sbjct: 316 FGNEYQQSYGGGPQRNSNFGNNRPAPYS 343
>M25545-4|AAA28621.1| 361|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 361
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 302 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 329
>M25545-3|AAA28624.1| 365|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 365
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 306 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 333
>M25545-2|AAA28623.1| 360|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 360
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 301 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 328
>M25545-1|AAA28622.1| 364|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 364
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 305 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 332
>M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 306 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 333
>AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p
protein.
Length = 361
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 302 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 329
>AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF,
isoform F protein.
Length = 361
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 302 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 329
>AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD,
isoform D protein.
Length = 361
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 302 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 329
>AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC,
isoform C protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 306 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 333
>AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB,
isoform B protein.
Length = 365
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 306 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 333
>AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE,
isoform E protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 301 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 328
>AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA,
isoform A protein.
Length = 364
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQA-YGNNRSTPY 92
DFG Y QQ+Y GGP R + NNR PY
Sbjct: 305 DFGGY-QQNYGGGPQRGGGNFNNNRMQPY 332
>L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprotein
protein.
Length = 465
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprotein
protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>BT010254-1|AAQ23572.1| 196|Drosophila melanogaster RE34656p
protein.
Length = 196
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 148 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 176
>BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p
protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE,
isoform E protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD,
isoform D protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI,
isoform I protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH,
isoform H protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF,
isoform F protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB,
isoform B protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG,
isoform G protein.
Length = 465
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC,
isoform C protein.
Length = 465
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
>AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA,
isoform A protein.
Length = 465
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 9 DFGNYNQQSYSGGPTRNQAYGNNRSTPYN 95
+FG QQ+Y GGP+++ NR PY+
Sbjct: 386 NFGTGYQQNYGGGPSKHNNMNANRMNPYS 414
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,185,409
Number of Sequences: 53049
Number of extensions: 267780
Number of successful extensions: 578
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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