Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20937
(717 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 119 9e-27
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 119 9e-27
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 119 9e-27
BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for IM... 119 9e-27
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 119 9e-27
AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A (5... 93 7e-19
BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein NOP5/... 87 6e-17
BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein prot... 87 6e-17
AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5 pro... 87 6e-17
AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein NOP5/... 87 6e-17
AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein. 87 6e-17
BC057255-1|AAH57255.1| 974|Homo sapiens KIAA0423 protein protein. 32 2.4
AB007883-1|BAA24853.2| 1723|Homo sapiens KIAA0423 protein. 32 2.4
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 31 4.1
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 31 4.1
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 31 4.1
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 119 bits (287), Expect = 9e-27
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 156 HSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNAT 215
Query: 690 YTKCAEFI 713
Y + A+FI
Sbjct: 216 YCRLAQFI 223
Score = 93.5 bits (222), Expect = 7e-19
Identities = 51/85 (60%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSEGILTEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRG 435
VSEG++ EDL L LE LP +KK K LGV DPK+GAAI E L C G + EILRG
Sbjct: 73 VSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRG 130
Query: 436 IRYHFHSLIKGLT-LKACSVAQLGL 507
+R HFH+L+KGLT L AC AQLGL
Sbjct: 131 VRLHFHNLVKGLTDLSACK-AQLGL 154
Score = 68.9 bits (161), Expect = 2e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 59 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 238
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 7 MVLLHVLFEHAVGYALVALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 66
Query: 239 LENIN 253
LEN N
Sbjct: 67 LENAN 71
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 119 bits (287), Expect = 9e-27
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 150 HSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNAT 209
Query: 690 YTKCAEFI 713
Y + A+FI
Sbjct: 210 YCRLAQFI 217
Score = 93.5 bits (222), Expect = 7e-19
Identities = 51/85 (60%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSEGILTEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRG 435
VSEG++ EDL L LE LP +KK K LGV DPK+GAAI E L C G + EILRG
Sbjct: 67 VSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRG 124
Query: 436 IRYHFHSLIKGLT-LKACSVAQLGL 507
+R HFH+L+KGLT L AC AQLGL
Sbjct: 125 VRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 69.3 bits (162), Expect = 1e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 59 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 238
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 239 LENIN 253
LEN N
Sbjct: 61 LENAN 65
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 119 bits (287), Expect = 9e-27
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 150 HSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNAT 209
Query: 690 YTKCAEFI 713
Y + A+FI
Sbjct: 210 YCRLAQFI 217
Score = 93.5 bits (222), Expect = 7e-19
Identities = 51/85 (60%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSEGILTEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRG 435
VSEG++ EDL L LE LP +KK K LGV DPK+GAAI E L C G + EILRG
Sbjct: 67 VSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRG 124
Query: 436 IRYHFHSLIKGLT-LKACSVAQLGL 507
+R HFH+L+KGLT L AC AQLGL
Sbjct: 125 VRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 69.3 bits (162), Expect = 1e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 59 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 238
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 239 LENIN 253
LEN N
Sbjct: 61 LENAN 65
>BC018421-1|AAH18421.1| 447|Homo sapiens Unknown (protein for
IMAGE:4448930) protein.
Length = 447
Score = 119 bits (287), Expect = 9e-27
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 146 HSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNAT 205
Query: 690 YTKCAEFI 713
Y + A+FI
Sbjct: 206 YCRLAQFI 213
Score = 93.5 bits (222), Expect = 7e-19
Identities = 51/85 (60%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSEGILTEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRG 435
VSEG++ EDL L LE LP +KK K LGV DPK+GAAI E L C G + EILRG
Sbjct: 63 VSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRG 120
Query: 436 IRYHFHSLIKGLT-LKACSVAQLGL 507
+R HFH+L+KGLT L AC AQLGL
Sbjct: 121 VRLHFHNLVKGLTDLSACK-AQLGL 144
Score = 68.9 bits (161), Expect = 2e-11
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +2
Query: 71 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 250
+VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VALEN
Sbjct: 1 HVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVALENA 60
Query: 251 N 253
N
Sbjct: 61 N 61
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 119 bits (287), Expect = 9e-27
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+REWY YHFPELV I+ +N
Sbjct: 150 HSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNAT 209
Query: 690 YTKCAEFI 713
Y + A+FI
Sbjct: 210 YCRLAQFI 217
Score = 93.5 bits (222), Expect = 7e-19
Identities = 51/85 (60%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSEGILTEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRG 435
VSEG++ EDL L LE LP +KK K LGV DPK+GAAI E L C G + EILRG
Sbjct: 67 VSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRG 124
Query: 436 IRYHFHSLIKGLT-LKACSVAQLGL 507
+R HFH+L+KGLT L AC AQLGL
Sbjct: 125 VRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 69.3 bits (162), Expect = 1e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 59 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 238
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 239 LENIN 253
LEN N
Sbjct: 61 LENAN 65
>AL049712-5|CAI22418.1| 281|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 281
Score = 93.5 bits (222), Expect = 7e-19
Identities = 51/85 (60%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSEGILTEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRG 435
VSEG++ EDL L LE LP +KK K LGV DPK+GAAI E L C G + EILRG
Sbjct: 67 VSEGVVHEDLRLLLETHLPSKKK--KVLLGVGDPKIGAAIQEELGYNCQTGGVIAEILRG 124
Query: 436 IRYHFHSLIKGLT-LKACSVAQLGL 507
+R HFH+L+KGLT L AC AQLGL
Sbjct: 125 VRLHFHNLVKGLTDLSACK-AQLGL 148
Score = 86.2 bits (204), Expect = 1e-16
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 29/97 (29%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIRE-----------WY----- 641
HSYSRA+VKFNV+RVDNMIIQSI+LLDQLDKD+NTFSMR+R+ W+
Sbjct: 150 HSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVRQSRCGEGKAVALWFLMKQL 209
Query: 642 -------------SYHFPELVSIVPENHLYTKCAEFI 713
YHFPELV I+ +N Y + A+FI
Sbjct: 210 GQGVTVALCREWYGYHFPELVKIINDNATYCRLAQFI 246
Score = 69.3 bits (162), Expect = 1e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +2
Query: 59 MSKFYVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVA 238
M +VLFEH+ G+AL + E EE++ PQVEESV +L +F+++V L+AF P S+ VA
Sbjct: 1 MVLLHVLFEHAVGYALLALKEVEEISLLQPQVEESVLNLGKFHSIVRLVAFCPFASSQVA 60
Query: 239 LENIN 253
LEN N
Sbjct: 61 LENAN 65
>BC032592-1|AAH32592.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 87.0 bits (206), Expect = 6e-17
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ +N
Sbjct: 144 HSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLT 203
Query: 690 YTKCAE 707
Y KC +
Sbjct: 204 YCKCLQ 209
Score = 50.4 bits (115), Expect = 6e-06
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +1
Query: 283 LNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLI 462
+N L+ L K K + L V D KLG I E L + C H+ V E++RGIR LI
Sbjct: 68 INKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLI 127
Query: 463 KGLTLKACSVAQLGLA 510
G+ + + LGLA
Sbjct: 128 PGVEPREMAAMCLGLA 143
>BC009306-1|AAH09306.1| 522|Homo sapiens NOP5/NOP58 protein
protein.
Length = 522
Score = 87.0 bits (206), Expect = 6e-17
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ +N
Sbjct: 144 HSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLT 203
Query: 690 YTKCAE 707
Y KC +
Sbjct: 204 YCKCLQ 209
Score = 50.4 bits (115), Expect = 6e-06
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +1
Query: 283 LNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLI 462
+N L+ L K K + L V D KLG I E L + C H+ V E++RGIR LI
Sbjct: 68 INKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLI 127
Query: 463 KGLTLKACSVAQLGLA 510
G+ + + LGLA
Sbjct: 128 PGVEPREMAAMCLGLA 143
>AF263608-1|AAF91394.1| 529|Homo sapiens nucleolar protein 5
protein.
Length = 529
Score = 87.0 bits (206), Expect = 6e-17
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ +N
Sbjct: 144 HSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLT 203
Query: 690 YTKCAE 707
Y KC +
Sbjct: 204 YCKCLQ 209
Score = 50.4 bits (115), Expect = 6e-06
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +1
Query: 283 LNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLI 462
+N L+ L K K + L V D KLG I E L + C H+ V E++RGIR LI
Sbjct: 68 INKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLI 127
Query: 463 KGLTLKACSVAQLGLA 510
G+ + + LGLA
Sbjct: 128 PGVEPREMAAMCLGLA 143
>AF123534-1|AAD27610.1| 529|Homo sapiens nucleolar protein
NOP5/NOP58 protein.
Length = 529
Score = 87.0 bits (206), Expect = 6e-17
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ +N
Sbjct: 144 HSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLT 203
Query: 690 YTKCAE 707
Y KC +
Sbjct: 204 YCKCLQ 209
Score = 50.4 bits (115), Expect = 6e-06
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +1
Query: 283 LNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLI 462
+N L+ L K K + L V D KLG I E L + C H+ V E++RGIR LI
Sbjct: 68 INKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLI 127
Query: 463 KGLTLKACSVAQLGLA 510
G+ + + LGLA
Sbjct: 128 PGVEPREMAAMCLGLA 143
>AC064836-1|AAY24145.1| 529|Homo sapiens unknown protein.
Length = 529
Score = 87.0 bits (206), Expect = 6e-17
Identities = 36/66 (54%), Positives = 49/66 (74%)
Frame = +3
Query: 510 HSYSRARVKFNVHRVDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVPENHL 689
HS SR R+KF+ +VD MI+Q+I+LLD LDK++N + MR REWY +HFPEL I+ +N
Sbjct: 144 HSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLT 203
Query: 690 YTKCAE 707
Y KC +
Sbjct: 204 YCKCLQ 209
Score = 50.4 bits (115), Expect = 6e-06
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +1
Query: 283 LNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILRGIRYHFHSLI 462
+N L+ L K K + L V D KLG I E L + C H+ V E++RGIR LI
Sbjct: 68 INKQLKKVLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLI 127
Query: 463 KGLTLKACSVAQLGLA 510
G+ + + LGLA
Sbjct: 128 PGVEPREMAAMCLGLA 143
>BC057255-1|AAH57255.1| 974|Homo sapiens KIAA0423 protein protein.
Length = 974
Score = 31.9 bits (69), Expect = 2.4
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 309 SKKEETVKMHTRCTGSQARSSHQRGLGNSVHAYRSSPGDFERHTLSLPLAHQRSYPQSVQ 488
SK ++T T CT S ++ + SSP +HT L ++ ++S SV
Sbjct: 788 SKTQQTFGSQTECTSSNGQNPSPGAYILPSYPV-SSPRTSPKHTSPLIISPKKSQDNSVN 846
Query: 489 CGTAWPCHSY 518
+WP S+
Sbjct: 847 FSNSWPLKSF 856
>AB007883-1|BAA24853.2| 1723|Homo sapiens KIAA0423 protein.
Length = 1723
Score = 31.9 bits (69), Expect = 2.4
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 309 SKKEETVKMHTRCTGSQARSSHQRGLGNSVHAYRSSPGDFERHTLSLPLAHQRSYPQSVQ 488
SK ++T T CT S ++ + SSP +HT L ++ ++S SV
Sbjct: 791 SKTQQTFGSQTECTSSNGQNPSPGAYILPSYPV-SSPRTSPKHTSPLIISPKKSQDNSVN 849
Query: 489 CGTAWPCHSY 518
+WP S+
Sbjct: 850 FSNSWPLKSF 859
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 31.1 bits (67), Expect = 4.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 561 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 677
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 31.1 bits (67), Expect = 4.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 561 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 677
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 31.1 bits (67), Expect = 4.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 561 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 677
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 130
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 31.1 bits (67), Expect = 4.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 561 MIIQSIALLDQLDKDVNTFSMRIREWYSYHFPELVSIVP 677
+I+ + L +++ ++N IR+ YS FPEL S+VP
Sbjct: 12 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVP 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,232,406
Number of Sequences: 237096
Number of extensions: 2255714
Number of successful extensions: 4953
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4946
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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