Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20936
         (517 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DRH6 Cluster: Chromosome undetermined scaffold_60, wh...    34   2.2  
UniRef50_Q9EMF0 Cluster: AMV256; n=1; Amsacta moorei entomopoxvi...    33   2.9  
UniRef50_Q16ZR1 Cluster: Trypsin-alpha, putative; n=2; Aedes aeg...    32   6.8  

>UniRef50_A0DRH6 Cluster: Chromosome undetermined scaffold_60, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_60,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1373

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +1

Query: 280 TYRNADSELVCAFVVCLPMSAPNATCXWRSRVXYGGCNRGSAARSDCRYAVCHCCVGV 453
           T  N + +  C F+VC  +   N     ++   YG   R    + DC + VCHCC  +
Sbjct: 250 TMLNGNKDFFCQFLVCDSLGKVNLMKIRKNLFTYG-IERYPLFQ-DCAFGVCHCCESI 305


>UniRef50_Q9EMF0 Cluster: AMV256; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV256 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 609

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = -1

Query: 199 SRNLFRTE---CLLVS*CRFPLFYFYFIYFTSVTHTITT*YLLQYINNIKLN*IDDLIEN 29
           ++N+++++   C+L +   +P  YFY+ YF           ++ + +NI LN IDD IE 
Sbjct: 429 TKNIYKSDNNICVLNNNYNYPKIYFYYKYF-----------IIYFFSNIFLN-IDDAIEY 476

Query: 28  LRRDPNFNV 2
           ++  P FN+
Sbjct: 477 VKYKPYFNL 485


>UniRef50_Q16ZR1 Cluster: Trypsin-alpha, putative; n=2; Aedes
           aegypti|Rep: Trypsin-alpha, putative - Aedes aegypti
           (Yellowfever mosquito)
          Length = 311

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +1

Query: 307 VCAFVVCLPMSAPNATCXWRSRVXYGGCNRGSAARSDCRYAVCHCCVG-VIYCRPTSPSL 483
           V AFVVCL ++AP     W+ R+  GG N   A  + C +AV    VG   +C     + 
Sbjct: 10  VIAFVVCLLVAAPIEASEWQQRI-VGGSN---ATGNACPHAVAIRLVGRDFHCNGALITT 65

Query: 484 FWVLTISSSYY 516
             VLT +   Y
Sbjct: 66  QDVLTAAQCVY 76


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,560,423
Number of Sequences: 1657284
Number of extensions: 6429855
Number of successful extensions: 14792
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14784
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)