Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20936
         (517 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.92 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.92 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.92 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.92 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -1

Query: 202 QSRNLFRTE--CLLVS*CRFPLFYFYFIYFTSVTHTITT*YLLQYI 71
           Q  +LFR+   C   S  +    +F  ++FT   HT+    L+ YI
Sbjct: 143 QLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -1

Query: 202 QSRNLFRTE--CLLVS*CRFPLFYFYFIYFTSVTHTITT*YLLQYI 71
           Q  +LFR+   C   S  +    +F  ++FT   HT+    L+ YI
Sbjct: 143 QLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -1

Query: 202 QSRNLFRTE--CLLVS*CRFPLFYFYFIYFTSVTHTITT*YLLQYI 71
           Q  +LFR+   C   S  +    +F  ++FT   HT+    L+ YI
Sbjct: 143 QLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -1

Query: 202 QSRNLFRTE--CLLVS*CRFPLFYFYFIYFTSVTHTITT*YLLQYI 71
           Q  +LFR+   C   S  +    +F  ++FT   HT+    L+ YI
Sbjct: 143 QLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYI 188


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 206 FAVSKSFSNRMSSCFVM*VPVILFLFHLFYICDTYNNNLIFIAIY 72
           F +S  FS    S F+  +P   + F+L YI  TY+  L  I  Y
Sbjct: 67  FPISAHFS--FMSRFLC-LPFYSYFFYLSYIYTTYSRKLSGIFKY 108


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 206 FAVSKSFSNRMSSCFVM*VPVILFLFHLFYICDTYNNNLIFIAIY 72
           F +S  FS    S F+  +P   + F+L YI  TY+  L  I  Y
Sbjct: 23  FPISAHFS--FMSRFLC-LPFYSYFFYLSYIYTTYSRKLSGIFKY 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,699
Number of Sequences: 336
Number of extensions: 1652
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)