Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20934
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    24   0.96 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.9  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 362 EDMRVSRNHAEIEVTDTCVILKSLHQNPCFYID 460
           ED+R  + +   + T T + +  LH NP  Y D
Sbjct: 71  EDVRTQKGYLIPKDTITIIHIYDLHHNPDIYPD 103


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 248 IIISCHHCCSKHKTTLLPHYWKAVQDFRMQIL 153
           + + C    +KH T +    W+  +DFR   L
Sbjct: 183 VAMDCLKGNAKHWTGIFQKKWRGYEDFRRDFL 214


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -1

Query: 658 LVLLSTRWVFLYYQLEYYCL*HHFSSHLMSTILIQTNMYQVVYQIYHHYIQLCIILC 488
           L+LL   + F Y  L + C    F+ HL+  +            IY+ Y  L I+LC
Sbjct: 252 LLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLC-----------IYYFYCALIILLC 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,963
Number of Sequences: 336
Number of extensions: 3616
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)