BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20934 (658 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC041144-1|AAH41144.1| 511|Homo sapiens chromosome 2 open readi... 45 2e-04 AC127383-1|AAY24008.1| 207|Homo sapiens unknown protein. 45 2e-04 AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai... 30 8.3 AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai... 30 8.3 AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domai... 30 8.3 AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai... 30 8.3 AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai... 30 8.3 AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domai... 30 8.3 AK055948-1|BAB71052.1| 671|Homo sapiens protein ( Homo sapiens ... 30 8.3 AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein. 30 8.3 >BC041144-1|AAH41144.1| 511|Homo sapiens chromosome 2 open reading frame 13 protein. Length = 511 Score = 45.2 bits (102), Expect = 2e-04 Identities = 22/52 (42%), Positives = 30/52 (57%) Frame = +2 Query: 299 KIDLPEGTHIIGRGKFIVNDAEDMRVSRNHAEIEVTDTCVILKSLHQNPCFY 454 ++ L G +IGRG + D RVSR HA +EV + +K +H NPCFY Sbjct: 15 RVALAPGETVIGRGPLL--GITDKRVSRRHAILEVAGGQLRIKPIHTNPCFY 64 >AC127383-1|AAY24008.1| 207|Homo sapiens unknown protein. Length = 207 Score = 45.2 bits (102), Expect = 2e-04 Identities = 22/52 (42%), Positives = 30/52 (57%) Frame = +2 Query: 299 KIDLPEGTHIIGRGKFIVNDAEDMRVSRNHAEIEVTDTCVILKSLHQNPCFY 454 ++ L G +IGRG + D RVSR HA +EV + +K +H NPCFY Sbjct: 15 RVALAPGETVIGRGPLL--GITDKRVSRRHAILEVAGGQLRIKPIHTNPCFY 64 >AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 1495 Score = 29.9 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92 LH T+LL A + +K L + + K+ I + L +Y + L VLY R P Sbjct: 1128 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 1186 >AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 1259 Score = 29.9 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92 LH T+LL A + +K L + + K+ I + L +Y + L VLY R P Sbjct: 892 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 950 >AL353678-2|CAH71515.1| 784|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 784 Score = 29.9 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92 LH T+LL A + +K L + + K+ I + L +Y + L VLY R P Sbjct: 417 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 475 >AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 1495 Score = 29.9 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92 LH T+LL A + +K L + + K+ I + L +Y + L VLY R P Sbjct: 1128 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 1186 >AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 1259 Score = 29.9 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92 LH T+LL A + +K L + + K+ I + L +Y + L VLY R P Sbjct: 892 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 950 >AL137849-2|CAI14919.1| 784|Homo sapiens zinc finger, CCHC domain containing 6 protein. Length = 784 Score = 29.9 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92 LH T+LL A + +K L + + K+ I + L +Y + L VLY R P Sbjct: 417 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 475 >AK055948-1|BAB71052.1| 671|Homo sapiens protein ( Homo sapiens cDNA FLJ31386 fis, clone NT2NE1000014, weakly similar to Schizosaccharomyces pombe caffeine-induced death protein 1 ). Length = 671 Score = 29.9 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92 LH T+LL A + +K L + + K+ I + L +Y + L VLY R P Sbjct: 417 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 475 >AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein. Length = 1090 Score = 29.9 bits (64), Expect = 8.3 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = -1 Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92 LH T+LL A + +K L + + K+ I + L +Y + L VLY R P Sbjct: 723 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 781 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 88,944,064 Number of Sequences: 237096 Number of extensions: 1761550 Number of successful extensions: 2492 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2492 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7366354010 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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