Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20934
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open readi...    45   2e-04
AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.              45   2e-04
AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai...    30   8.3  
AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai...    30   8.3  
AL353678-2|CAH71515.1|  784|Homo sapiens zinc finger, CCHC domai...    30   8.3  
AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai...    30   8.3  
AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai...    30   8.3  
AL137849-2|CAI14919.1|  784|Homo sapiens zinc finger, CCHC domai...    30   8.3  
AK055948-1|BAB71052.1|  671|Homo sapiens protein ( Homo sapiens ...    30   8.3  
AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.     30   8.3  

>BC041144-1|AAH41144.1|  511|Homo sapiens chromosome 2 open reading
           frame 13 protein.
          Length = 511

 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 22/52 (42%), Positives = 30/52 (57%)
 Frame = +2

Query: 299 KIDLPEGTHIIGRGKFIVNDAEDMRVSRNHAEIEVTDTCVILKSLHQNPCFY 454
           ++ L  G  +IGRG  +     D RVSR HA +EV    + +K +H NPCFY
Sbjct: 15  RVALAPGETVIGRGPLL--GITDKRVSRRHAILEVAGGQLRIKPIHTNPCFY 64


>AC127383-1|AAY24008.1|  207|Homo sapiens unknown protein.
          Length = 207

 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 22/52 (42%), Positives = 30/52 (57%)
 Frame = +2

Query: 299 KIDLPEGTHIIGRGKFIVNDAEDMRVSRNHAEIEVTDTCVILKSLHQNPCFY 454
           ++ L  G  +IGRG  +     D RVSR HA +EV    + +K +H NPCFY
Sbjct: 15  RVALAPGETVIGRGPLL--GITDKRVSRRHAILEVAGGQLRIKPIHTNPCFY 64


>AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain
            containing 6 protein.
          Length = 1495

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 262  LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92
            LH T+LL A   +   +K L +   +  K+  I +     L +Y + L VLY    R P
Sbjct: 1128 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 1186


>AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain
            containing 6 protein.
          Length = 1259

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 262  LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92
            LH T+LL A   +   +K L +   +  K+  I +     L +Y + L VLY    R P
Sbjct: 892  LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 950


>AL353678-2|CAH71515.1|  784|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 784

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92
           LH T+LL A   +   +K L +   +  K+  I +     L +Y + L VLY    R P
Sbjct: 417 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 475


>AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain
            containing 6 protein.
          Length = 1495

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 262  LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92
            LH T+LL A   +   +K L +   +  K+  I +     L +Y + L VLY    R P
Sbjct: 1128 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 1186


>AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain
            containing 6 protein.
          Length = 1259

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 262  LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92
            LH T+LL A   +   +K L +   +  K+  I +     L +Y + L VLY    R P
Sbjct: 892  LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 950


>AL137849-2|CAI14919.1|  784|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 784

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92
           LH T+LL A   +   +K L +   +  K+  I +     L +Y + L VLY    R P
Sbjct: 417 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 475


>AK055948-1|BAB71052.1|  671|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31386 fis, clone NT2NE1000014, weakly similar to
           Schizosaccharomyces pombe caffeine-induced death protein
           1 ).
          Length = 671

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92
           LH T+LL A   +   +K L +   +  K+  I +     L +Y + L VLY    R P
Sbjct: 417 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 475


>AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.
          Length = 1090

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -1

Query: 262 LHRTQLLLAVITVVQNIKQLSF--HIIGKLFKISECKYFILINYNFKLTVLYVFSLRRP 92
           LH T+LL A   +   +K L +   +  K+  I +     L +Y + L VLY    R P
Sbjct: 723 LHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRNP 781


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,944,064
Number of Sequences: 237096
Number of extensions: 1761550
Number of successful extensions: 2492
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2492
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)